RNA–Protein interactions for RNA: ENST00000545225.5

PSME3-205, Transcript of proteasome activator subunit 3, humanhuman

TSL 2 BASIC

Gene PSME3, Length 3,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-205ENST00000545225 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
PSME3-205ENST00000545225 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
PSME3-205ENST00000545225 ZCCHC6Q5VYS8 1495 aaKnown RBP20.4■□□□□ 0.86
PSME3-205ENST00000545225 DCAF1Q9Y4B6 1507 aa20.09■□□□□ 0.81
PSME3-205ENST00000545225 ABCC9O60706 1549 aa19.88■□□□□ 0.77
PSME3-205ENST00000545225 MYO15BQ96JP2 1530 aa19.84■□□□□ 0.77
PSME3-205ENST00000545225 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
PSME3-205ENST00000545225 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
PSME3-205ENST00000545225 NACADO15069 1562 aa19.67■□□□□ 0.74
PSME3-205ENST00000545225 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
PSME3-205ENST00000545225 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
PSME3-205ENST00000545225 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
PSME3-205ENST00000545225 BICRAQ9NZM4 1560 aa18.95■□□□□ 0.62
PSME3-205ENST00000545225 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
PSME3-205ENST00000545225 CECR2Q9BXF3 1484 aa18.83■□□□□ 0.61
PSME3-205ENST00000545225 RSF1Q96T23 1441 aaPredicted RBP18.82■□□□□ 0.6
PSME3-205ENST00000545225 MROH2BQ7Z745 1585 aa18.74■□□□□ 0.59
PSME3-205ENST00000545225 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
PSME3-205ENST00000545225 BAZ1AQ9NRL2 1556 aaPredicted RBP18.71■□□□□ 0.59
PSME3-205ENST00000545225 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
PSME3-205ENST00000545225 WIZO95785 1651 aa18.59■□□□□ 0.57
PSME3-205ENST00000545225 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
PSME3-205ENST00000545225 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
PSME3-205ENST00000545225 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
PSME3-205ENST00000545225 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
PSME3-205ENST00000545225 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
PSME3-205ENST00000545225 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
PSME3-205ENST00000545225 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
PSME3-205ENST00000545225 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
PSME3-205ENST00000545225 NCAPD3P42695 1498 aa18.15■□□□□ 0.5
PSME3-205ENST00000545225 HMGXB3Q12766 1538 aa18.14■□□□□ 0.5
PSME3-205ENST00000545225 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
PSME3-205ENST00000545225 TRIM41Q8WV44 630 aa17.82■□□□□ 0.44
PSME3-205ENST00000545225 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
PSME3-205ENST00000545225 CFTRP13569 1480 aa17.76■□□□□ 0.43
PSME3-205ENST00000545225 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
PSME3-205ENST00000545225 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
PSME3-205ENST00000545225 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
PSME3-205ENST00000545225 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
PSME3-205ENST00000545225 TOP2BQ02880 1626 aa17.58■□□□□ 0.4
PSME3-205ENST00000545225 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.4
PSME3-205ENST00000545225 DNAJC5BQ9UF47 199 aa17.56■□□□□ 0.4
PSME3-205ENST00000545225 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.4
PSME3-205ENST00000545225 CUX1P39880 1505 aa17.52■□□□□ 0.4
PSME3-205ENST00000545225 NESP48681 1621 aa17.51■□□□□ 0.39
PSME3-205ENST00000545225 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
PSME3-205ENST00000545225 SOGA1O94964 1423 aa17.48■□□□□ 0.39
PSME3-205ENST00000545225 FAM9AQ8IZU1 332 aaPredicted RBP17.47■□□□□ 0.39
PSME3-205ENST00000545225 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
PSME3-205ENST00000545225 EEA1Q15075 1411 aa17.44■□□□□ 0.38
PSME3-205ENST00000545225 RUSC2Q8N2Y8 1516 aa17.43■□□□□ 0.38
PSME3-205ENST00000545225 HRCP23327 699 aa17.39■□□□□ 0.37
PSME3-205ENST00000545225 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
PSME3-205ENST00000545225 PDS5BQ9NTI5 1447 aa17.34■□□□□ 0.37
PSME3-205ENST00000545225 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
PSME3-205ENST00000545225 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
PSME3-205ENST00000545225 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
PSME3-205ENST00000545225 TOPBP1Q92547 1522 aa17.3■□□□□ 0.36
PSME3-205ENST00000545225 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
PSME3-205ENST00000545225 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
PSME3-205ENST00000545225 KIF21BO75037 1637 aa17.26■□□□□ 0.35
PSME3-205ENST00000545225 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
PSME3-205ENST00000545225 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
PSME3-205ENST00000545225 KIF27Q86VH2 1401 aa17.21■□□□□ 0.35
PSME3-205ENST00000545225 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
PSME3-205ENST00000545225 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
PSME3-205ENST00000545225 TNIKQ9UKE5 1360 aa17.17■□□□□ 0.34
PSME3-205ENST00000545225 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
PSME3-205ENST00000545225 WDR97A6NE52 1622 aa17.16■□□□□ 0.34
PSME3-205ENST00000545225 CUX2O14529 1486 aa17.16■□□□□ 0.34
PSME3-205ENST00000545225 PRXQ9BXM0 1461 aa17.16■□□□□ 0.34
PSME3-205ENST00000545225 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
PSME3-205ENST00000545225 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
PSME3-205ENST00000545225 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.33
PSME3-205ENST00000545225 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
PSME3-205ENST00000545225 RAPGEF2Q9Y4G8 1499 aa17.13■□□□□ 0.33
PSME3-205ENST00000545225 WDR62O43379 1518 aa17.09■□□□□ 0.33
PSME3-205ENST00000545225 IGF1RP08069 1367 aa17.09■□□□□ 0.33
PSME3-205ENST00000545225 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
PSME3-205ENST00000545225 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
PSME3-205ENST00000545225 ABCA5Q8WWZ7 1642 aa17.05■□□□□ 0.32
PSME3-205ENST00000545225 THOC2Q8NI27 1593 aaKnown RBP17.05■□□□□ 0.32
PSME3-205ENST00000545225 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
PSME3-205ENST00000545225 ERCC6Q03468 1493 aa17.01■□□□□ 0.31
PSME3-205ENST00000545225 PELP1Q8IZL8 1130 aaKnown RBP16.98■□□□□ 0.31
PSME3-205ENST00000545225 CUL7Q14999 1698 aa16.97■□□□□ 0.31
PSME3-205ENST00000545225 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
PSME3-205ENST00000545225 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
PSME3-205ENST00000545225 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
PSME3-205ENST00000545225 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
PSME3-205ENST00000545225 CLIP1P30622 1438 aa16.91■□□□□ 0.3
PSME3-205ENST00000545225 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
PSME3-205ENST00000545225 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
PSME3-205ENST00000545225 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.294e-7■■■■□ 21.8
PSME3-205ENST00000545225 GRIN2BQ13224 1484 aa16.82■□□□□ 0.28
PSME3-205ENST00000545225 EIF4G3O43432 1585 aaKnown RBP16.82■□□□□ 0.28
PSME3-205ENST00000545225 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
PSME3-205ENST00000545225 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
PSME3-205ENST00000545225 CTTNBP2Q8WZ74 1663 aa16.8■□□□□ 0.28
PSME3-205ENST00000545225 VPS8Q8N3P4 1428 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms