RNA–Protein interactions for RNA: ENST00000545091.5

ARMC6-219, Transcript of armadillo repeat containing 6, humanhuman

TSL 5

Gene ARMC6, Length 1,079 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARMC6-219ENST00000545091 NISCHQ9Y2I1 1504 aa43.16■■■■■ 4.5
ARMC6-219ENST00000545091 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
ARMC6-219ENST00000545091 ABCC9O60706 1549 aa38.5■■■■□ 3.75
ARMC6-219ENST00000545091 RB1CC1Q8TDY2 1594 aa36.7■■■■□ 3.47
ARMC6-219ENST00000545091 NACADO15069 1562 aa36.5■■■■□ 3.43
ARMC6-219ENST00000545091 DCAF8L2P0C7V8 631 aa36.32■■■■□ 3.4
ARMC6-219ENST00000545091 DNAJC5BQ9UF47 199 aa36.05■■■■□ 3.36
ARMC6-219ENST00000545091 MYO15BQ96JP2 1530 aa36.04■■■■□ 3.36
ARMC6-219ENST00000545091 UNC13AQ9UPW8 1703 aa36.01■■■■□ 3.36
ARMC6-219ENST00000545091 PABPN1Q86U42 306 aaKnown RBP eCLIP35.88■■■■□ 3.33
ARMC6-219ENST00000545091 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
ARMC6-219ENST00000545091 BICRAQ9NZM4 1560 aa35.7■■■■□ 3.31
ARMC6-219ENST00000545091 DCAF1Q9Y4B6 1507 aa35.65■■■■□ 3.3
ARMC6-219ENST00000545091 SCRIBQ14160 1630 aa35.23■■■■□ 3.23
ARMC6-219ENST00000545091 SHROOM4Q9ULL8 1493 aa35.13■■■■□ 3.21
ARMC6-219ENST00000545091 CC2D2AQ9P2K1 1620 aa34.81■■■■□ 3.16
ARMC6-219ENST00000545091 EIF4G1Q04637 1599 aaKnown RBP34.76■■■■□ 3.16
ARMC6-219ENST00000545091 CECR2Q9BXF3 1484 aa34.65■■■■□ 3.14
ARMC6-219ENST00000545091 NCAPD3P42695 1498 aa33.7■■■□□ 2.99
ARMC6-219ENST00000545091 SMARCA4P51532 1647 aa33.64■■■□□ 2.98
ARMC6-219ENST00000545091 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
ARMC6-219ENST00000545091 SMARCA2P51531 1590 aa33.51■■■□□ 2.96
ARMC6-219ENST00000545091 BAZ1AQ9NRL2 1556 aaPredicted RBP33.46■■■□□ 2.95
ARMC6-219ENST00000545091 HMGXB3Q12766 1538 aa33.45■■■□□ 2.95
ARMC6-219ENST00000545091 PEG3Q9GZU2 1588 aa33.31■■■□□ 2.92
ARMC6-219ENST00000545091 MROH2BQ7Z745 1585 aa33.28■■■□□ 2.92
ARMC6-219ENST00000545091 BAZ1BQ9UIG0 1483 aaKnown RBP33.27■■■□□ 2.92
ARMC6-219ENST00000545091 ERCC6Q03468 1493 aa33.18■■■□□ 2.9
ARMC6-219ENST00000545091 NESP48681 1621 aa33.15■■■□□ 2.9
ARMC6-219ENST00000545091 CUX2O14529 1486 aa33.09■■■□□ 2.89
ARMC6-219ENST00000545091 DNAJC5Q9H3Z4 198 aa32.94■■■□□ 2.86
ARMC6-219ENST00000545091 LAMC3Q9Y6N6 1575 aa32.91■■■□□ 2.86
ARMC6-219ENST00000545091 WIZO95785 1651 aa32.91■■■□□ 2.86
ARMC6-219ENST00000545091 THOC2Q8NI27 1593 aaKnown RBP32.78■■■□□ 2.84
ARMC6-219ENST00000545091 KIF21AQ7Z4S6 1674 aa32.76■■■□□ 2.84
ARMC6-219ENST00000545091 PDS5BQ9NTI5 1447 aa32.68■■■□□ 2.82
ARMC6-219ENST00000545091 CADPSQ9ULU8 1353 aa32.67■■■□□ 2.82
ARMC6-219ENST00000545091 RSF1Q96T23 1441 aaPredicted RBP32.63■■■□□ 2.81
ARMC6-219ENST00000545091 TOP2AP11388 1531 aaKnown RBP32.45■■■□□ 2.78
ARMC6-219ENST00000545091 MRC2Q9UBG0 1479 aa32.41■■■□□ 2.78
ARMC6-219ENST00000545091 WDR62O43379 1518 aa32.35■■■□□ 2.77
ARMC6-219ENST00000545091 CFTRP13569 1480 aa32.34■■■□□ 2.77
ARMC6-219ENST00000545091 CEP164Q9UPV0 1460 aa32.3■■■□□ 2.76
ARMC6-219ENST00000545091 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
ARMC6-219ENST00000545091 CCDC88BA6NC98 1476 aa32.1■■■□□ 2.73
ARMC6-219ENST00000545091 PRDM2Q13029 1718 aa32.1■■■□□ 2.73
ARMC6-219ENST00000545091 URB2Q14146 1524 aaKnown RBP32.05■■■□□ 2.72
ARMC6-219ENST00000545091 TOPBP1Q92547 1522 aa31.72■■■□□ 2.67
ARMC6-219ENST00000545091 IFT140Q96RY7 1462 aa31.65■■■□□ 2.66
ARMC6-219ENST00000545091 ZNF608Q9ULD9 1512 aaPredicted RBP31.64■■■□□ 2.66
ARMC6-219ENST00000545091 ABCC8Q09428 1581 aa31.63■■■□□ 2.65
ARMC6-219ENST00000545091 DNMBPQ6XZF7 1577 aa31.61■■■□□ 2.65
ARMC6-219ENST00000545091 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
ARMC6-219ENST00000545091 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
ARMC6-219ENST00000545091 TARBP1Q13395 1621 aaKnown RBP31.46■■■□□ 2.63
ARMC6-219ENST00000545091 EIF4G3O43432 1585 aaKnown RBP31.45■■■□□ 2.63
ARMC6-219ENST00000545091 POLA1P09884 1462 aaPredicted RBP31.4■■■□□ 2.62
ARMC6-219ENST00000545091 AQRO60306 1485 aaKnown RBP eCLIP31.36■■■□□ 2.614e-6■■■■□ 23.2
ARMC6-219ENST00000545091 RAD54L2Q9Y4B4 1467 aa31.31■■■□□ 2.6
ARMC6-219ENST00000545091 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
ARMC6-219ENST00000545091 SOGA1O94964 1423 aa31.25■■■□□ 2.59
ARMC6-219ENST00000545091 CUX1P39880 1505 aa31.25■■■□□ 2.59
ARMC6-219ENST00000545091 CHD1O14646 1710 aa31.24■■■□□ 2.59
ARMC6-219ENST00000545091 RIMBP3CA6NJZ7 1639 aa31.24■■■□□ 2.59
ARMC6-219ENST00000545091 RIMBP3BA6NNM3 1639 aa31.24■■■□□ 2.59
ARMC6-219ENST00000545091 RIMBP3Q9UFD9 1639 aa31.24■■■□□ 2.59
ARMC6-219ENST00000545091 FGD5Q6ZNL6 1462 aa31.23■■■□□ 2.59
ARMC6-219ENST00000545091 TDRD9Q8NDG6 1382 aaKnown RBP31.18■■■□□ 2.58
ARMC6-219ENST00000545091 ARHGEF11O15085 1522 aa31.12■■■□□ 2.57
ARMC6-219ENST00000545091 WDR97A6NE52 1622 aa31.09■■■□□ 2.57
ARMC6-219ENST00000545091 FBLN2P98095 1184 aa31.07■■■□□ 2.56
ARMC6-219ENST00000545091 SNAPC4Q5SXM2 1469 aa31.01■■■□□ 2.56
ARMC6-219ENST00000545091 GRIN2BQ13224 1484 aa30.95■■■□□ 2.54
ARMC6-219ENST00000545091 MAGI1Q96QZ7 1491 aaPredicted RBP30.93■■■□□ 2.54
ARMC6-219ENST00000545091 PBRM1Q86U86 1689 aa30.9■■■□□ 2.54
ARMC6-219ENST00000545091 CYB5RLQ6IPT4 315 aa30.88■■■□□ 2.53
ARMC6-219ENST00000545091 GAPVD1Q14C86 1478 aa30.88■■■□□ 2.53
ARMC6-219ENST00000545091 ABCA10Q8WWZ4 1543 aa30.88■■■□□ 2.53
ARMC6-219ENST00000545091 CHMP7Q8WUX9 453 aaPredicted RBP30.87■■■□□ 2.53
ARMC6-219ENST00000545091 CLASP1Q7Z460 1538 aa30.85■■■□□ 2.53
ARMC6-219ENST00000545091 ABCA5Q8WWZ7 1642 aa30.84■■■□□ 2.53
ARMC6-219ENST00000545091 SYNJ2O15056 1496 aa30.83■■■□□ 2.53
ARMC6-219ENST00000545091 ARAP1Q96P48 1450 aa30.83■■■□□ 2.53
ARMC6-219ENST00000545091 BIVM-ERCC5R4GMW8 1640 aa30.8■■■□□ 2.52
ARMC6-219ENST00000545091 SYNJ1O43426 1573 aa30.8■■■□□ 2.52
ARMC6-219ENST00000545091 TOP2BQ02880 1626 aa30.78■■■□□ 2.52
ARMC6-219ENST00000545091 WRNQ14191 1432 aaPredicted RBP eCLIP30.75■■■□□ 2.51
ARMC6-219ENST00000545091 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
ARMC6-219ENST00000545091 GRIN2AQ12879 1464 aa30.57■■■□□ 2.48
ARMC6-219ENST00000545091 ERICH3Q5RHP9 1530 aa30.48■■■□□ 2.47
ARMC6-219ENST00000545091 CEP170Q5SW79 1584 aa30.48■■■□□ 2.47
ARMC6-219ENST00000545091 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
ARMC6-219ENST00000545091 NUP160Q12769 1436 aa30.47■■■□□ 2.47
ARMC6-219ENST00000545091 TRHP20396 242 aaPredicted RBP30.44■■■□□ 2.46
ARMC6-219ENST00000545091 ERCC6L2Q5T890 1561 aa30.41■■■□□ 2.46
ARMC6-219ENST00000545091 SHROOM2Q13796 1616 aa30.35■■■□□ 2.45
ARMC6-219ENST00000545091 IGF1RP08069 1367 aa30.15■■■□□ 2.42
ARMC6-219ENST00000545091 JPH4Q96JJ6 628 aa30.15■■■□□ 2.42
ARMC6-219ENST00000545091 RUSC2Q8N2Y8 1516 aa30.15■■■□□ 2.42
ARMC6-219ENST00000545091 KIF27Q86VH2 1401 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms