RNA–Protein interactions for RNA: ENST00000544870.5

POLE-221, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 3

Gene POLE, Length 659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-221ENST00000544870 NISCHQ9Y2I1 1504 aa40.75■■■■■ 4.11
POLE-221ENST00000544870 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
POLE-221ENST00000544870 ABCC9O60706 1549 aa36.64■■■■□ 3.46
POLE-221ENST00000544870 RB1CC1Q8TDY2 1594 aa34.91■■■■□ 3.18
POLE-221ENST00000544870 NACADO15069 1562 aa34.65■■■■□ 3.14
POLE-221ENST00000544870 DCAF8L2P0C7V8 631 aa34.35■■■■□ 3.09
POLE-221ENST00000544870 DNAJC5BQ9UF47 199 aa34.34■■■■□ 3.09
POLE-221ENST00000544870 UNC13AQ9UPW8 1703 aa34.16■■■■□ 3.06
POLE-221ENST00000544870 MYO15BQ96JP2 1530 aa34.14■■■■□ 3.06
POLE-221ENST00000544870 PABPN1Q86U42 306 aaKnown RBP eCLIP34.06■■■■□ 3.041e-6■■■■■ 29
POLE-221ENST00000544870 BICRAQ9NZM4 1560 aa33.87■■■■□ 3.01
POLE-221ENST00000544870 ZCCHC6Q5VYS8 1495 aaKnown RBP33.79■■■■□ 3
POLE-221ENST00000544870 DCAF1Q9Y4B6 1507 aa33.69■■■□□ 2.98
POLE-221ENST00000544870 SHROOM4Q9ULL8 1493 aa33.45■■■□□ 2.95
POLE-221ENST00000544870 SCRIBQ14160 1630 aa33.38■■■□□ 2.93
POLE-221ENST00000544870 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
POLE-221ENST00000544870 EIF4G1Q04637 1599 aaKnown RBP33.06■■■□□ 2.88
POLE-221ENST00000544870 CECR2Q9BXF3 1484 aa33.03■■■□□ 2.88
POLE-221ENST00000544870 NCAPD3P42695 1498 aa31.94■■■□□ 2.7
POLE-221ENST00000544870 SMARCA4P51532 1647 aa31.85■■■□□ 2.69
POLE-221ENST00000544870 ATAD2BQ9ULI0 1458 aa31.84■■■□□ 2.69
POLE-221ENST00000544870 SMARCA2P51531 1590 aa31.79■■■□□ 2.68
POLE-221ENST00000544870 HMGXB3Q12766 1538 aa31.75■■■□□ 2.67
POLE-221ENST00000544870 ERCC6Q03468 1493 aa31.68■■■□□ 2.66
POLE-221ENST00000544870 BAZ1AQ9NRL2 1556 aaPredicted RBP31.67■■■□□ 2.66
POLE-221ENST00000544870 CUX2O14529 1486 aa31.65■■■□□ 2.66
POLE-221ENST00000544870 DNAJC5Q9H3Z4 198 aa31.61■■■□□ 2.65
POLE-221ENST00000544870 BAZ1BQ9UIG0 1483 aaKnown RBP31.56■■■□□ 2.64
POLE-221ENST00000544870 PEG3Q9GZU2 1588 aa31.53■■■□□ 2.64
POLE-221ENST00000544870 NESP48681 1621 aa31.46■■■□□ 2.63
POLE-221ENST00000544870 MROH2BQ7Z745 1585 aa31.39■■■□□ 2.62
POLE-221ENST00000544870 LAMC3Q9Y6N6 1575 aa31.29■■■□□ 2.6
POLE-221ENST00000544870 THOC2Q8NI27 1593 aaKnown RBP31.22■■■□□ 2.59
POLE-221ENST00000544870 KIF21AQ7Z4S6 1674 aa31.13■■■□□ 2.57
POLE-221ENST00000544870 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.56
POLE-221ENST00000544870 WIZO95785 1651 aa31.04■■■□□ 2.56
POLE-221ENST00000544870 CADPSQ9ULU8 1353 aa30.96■■■□□ 2.55
POLE-221ENST00000544870 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.53
POLE-221ENST00000544870 WDR62O43379 1518 aa30.77■■■□□ 2.52
POLE-221ENST00000544870 RSF1Q96T23 1441 aaPredicted RBP30.7■■■□□ 2.5
POLE-221ENST00000544870 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.5
POLE-221ENST00000544870 TOP2AP11388 1531 aaKnown RBP30.66■■■□□ 2.5
POLE-221ENST00000544870 FANCD2Q9BXW9 1451 aa30.63■■■□□ 2.49
POLE-221ENST00000544870 CFTRP13569 1480 aa30.62■■■□□ 2.49
POLE-221ENST00000544870 PRDM2Q13029 1718 aa30.42■■■□□ 2.46
POLE-221ENST00000544870 URB2Q14146 1524 aaKnown RBP30.38■■■□□ 2.45
POLE-221ENST00000544870 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
POLE-221ENST00000544870 TRIM41Q8WV44 630 aa30.21■■■□□ 2.43
POLE-221ENST00000544870 OSCARQ8IYS5 282 aa30.12■■■□□ 2.41
POLE-221ENST00000544870 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
POLE-221ENST00000544870 TOPBP1Q92547 1522 aa30.06■■■□□ 2.4
POLE-221ENST00000544870 ZNF608Q9ULD9 1512 aaPredicted RBP30.01■■■□□ 2.39
POLE-221ENST00000544870 ABCC8Q09428 1581 aa29.99■■■□□ 2.39
POLE-221ENST00000544870 DNMBPQ6XZF7 1577 aa29.97■■■□□ 2.39
POLE-221ENST00000544870 EIF4G3O43432 1585 aaKnown RBP29.9■■■□□ 2.38
POLE-221ENST00000544870 RIMBP3CA6NJZ7 1639 aa29.82■■■□□ 2.36
POLE-221ENST00000544870 RIMBP3BA6NNM3 1639 aa29.82■■■□□ 2.36
POLE-221ENST00000544870 RIMBP3Q9UFD9 1639 aa29.82■■■□□ 2.36
POLE-221ENST00000544870 TARBP1Q13395 1621 aaKnown RBP29.81■■■□□ 2.36
POLE-221ENST00000544870 POLA1P09884 1462 aaPredicted RBP29.74■■■□□ 2.35
POLE-221ENST00000544870 AQRO60306 1485 aaKnown RBP eCLIP29.71■■■□□ 2.356e-7■■■■□ 22.5
POLE-221ENST00000544870 CHD1O14646 1710 aa29.71■■■□□ 2.35
POLE-221ENST00000544870 ARHGEF11O15085 1522 aa29.71■■■□□ 2.35
POLE-221ENST00000544870 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
POLE-221ENST00000544870 SOGA1O94964 1423 aa29.57■■■□□ 2.32
POLE-221ENST00000544870 FGD5Q6ZNL6 1462 aa29.55■■■□□ 2.32
POLE-221ENST00000544870 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
POLE-221ENST00000544870 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
POLE-221ENST00000544870 CUX1P39880 1505 aa29.51■■■□□ 2.32
POLE-221ENST00000544870 FBLN2P98095 1184 aa29.51■■■□□ 2.31
POLE-221ENST00000544870 SNAPC4Q5SXM2 1469 aa29.45■■■□□ 2.31
POLE-221ENST00000544870 CYB5RLQ6IPT4 315 aa29.41■■■□□ 2.3
POLE-221ENST00000544870 ARAP1Q96P48 1450 aa29.4■■■□□ 2.3
POLE-221ENST00000544870 MAGI1Q96QZ7 1491 aaPredicted RBP29.38■■■□□ 2.29
POLE-221ENST00000544870 GRIN2BQ13224 1484 aa29.36■■■□□ 2.29
POLE-221ENST00000544870 CLASP1Q7Z460 1538 aa29.33■■■□□ 2.29
POLE-221ENST00000544870 SYNJ1O43426 1573 aa29.33■■■□□ 2.29
POLE-221ENST00000544870 PBRM1Q86U86 1689 aa29.31■■■□□ 2.28
POLE-221ENST00000544870 CHMP7Q8WUX9 453 aaPredicted RBP29.29■■■□□ 2.28
POLE-221ENST00000544870 SYNJ2O15056 1496 aa29.28■■■□□ 2.28
POLE-221ENST00000544870 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
POLE-221ENST00000544870 GAPVD1Q14C86 1478 aa29.24■■■□□ 2.27
POLE-221ENST00000544870 ABCA10Q8WWZ4 1543 aa29.21■■■□□ 2.27
POLE-221ENST00000544870 ABCA5Q8WWZ7 1642 aa29.21■■■□□ 2.27
POLE-221ENST00000544870 TRHP20396 242 aaPredicted RBP29.12■■■□□ 2.25
POLE-221ENST00000544870 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
POLE-221ENST00000544870 BIVM-ERCC5R4GMW8 1640 aa29.07■■■□□ 2.24
POLE-221ENST00000544870 TOP2BQ02880 1626 aa29.05■■■□□ 2.24
POLE-221ENST00000544870 ADAMTS12P58397 1594 aa29■■■□□ 2.23
POLE-221ENST00000544870 GRIN2AQ12879 1464 aa28.99■■■□□ 2.23
POLE-221ENST00000544870 CEP170Q5SW79 1584 aa28.9■■■□□ 2.22
POLE-221ENST00000544870 NUP160Q12769 1436 aa28.88■■■□□ 2.21
POLE-221ENST00000544870 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
POLE-221ENST00000544870 ERICH3Q5RHP9 1530 aa28.86■■■□□ 2.21
POLE-221ENST00000544870 ERCC6L2Q5T890 1561 aa28.84■■■□□ 2.21
POLE-221ENST00000544870 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
POLE-221ENST00000544870 RUSC2Q8N2Y8 1516 aa28.6■■■□□ 2.17
POLE-221ENST00000544870 PRG4Q92954 1404 aaPredicted RBP28.59■■■□□ 2.17
POLE-221ENST00000544870 JPH4Q96JJ6 628 aa28.52■■■□□ 2.16
POLE-221ENST00000544870 CUL7Q14999 1698 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms