RNA–Protein interactions for RNA: ENST00000544869.5

LINC01965-203, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4

Gene LINC01965, Length 546 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-203ENST00000544869 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.34
LINC01965-203ENST00000544869 ABCC9O60706 1549 aa26.7■■□□□ 1.86
LINC01965-203ENST00000544869 CCDC180Q9P1Z9 1646 aa26.62■■□□□ 1.85
LINC01965-203ENST00000544869 RB1CC1Q8TDY2 1594 aa25.36■■□□□ 1.65
LINC01965-203ENST00000544869 NACADO15069 1562 aa25.17■■□□□ 1.62
LINC01965-203ENST00000544869 DNAJC5BQ9UF47 199 aa25.12■■□□□ 1.61
LINC01965-203ENST00000544869 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
LINC01965-203ENST00000544869 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
LINC01965-203ENST00000544869 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
LINC01965-203ENST00000544869 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
LINC01965-203ENST00000544869 BICRAQ9NZM4 1560 aa24.66■■□□□ 1.54
LINC01965-203ENST00000544869 ZCCHC6Q5VYS8 1495 aaKnown RBP24.54■■□□□ 1.52
LINC01965-203ENST00000544869 DCAF1Q9Y4B6 1507 aa24.45■■□□□ 1.51
LINC01965-203ENST00000544869 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
LINC01965-203ENST00000544869 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
LINC01965-203ENST00000544869 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
LINC01965-203ENST00000544869 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
LINC01965-203ENST00000544869 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
LINC01965-203ENST00000544869 NCAPD3P42695 1498 aa23.24■■□□□ 1.31
LINC01965-203ENST00000544869 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
LINC01965-203ENST00000544869 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
LINC01965-203ENST00000544869 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
LINC01965-203ENST00000544869 DNAJC5Q9H3Z4 198 aa23.07■■□□□ 1.28
LINC01965-203ENST00000544869 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
LINC01965-203ENST00000544869 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
LINC01965-203ENST00000544869 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
LINC01965-203ENST00000544869 CUX2O14529 1486 aa22.99■■□□□ 1.27
LINC01965-203ENST00000544869 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
LINC01965-203ENST00000544869 NESP48681 1621 aa22.93■■□□□ 1.26
LINC01965-203ENST00000544869 PEG3Q9GZU2 1588 aa22.9■■□□□ 1.26
LINC01965-203ENST00000544869 MROH2BQ7Z745 1585 aa22.85■■□□□ 1.25
LINC01965-203ENST00000544869 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
LINC01965-203ENST00000544869 THOC2Q8NI27 1593 aaKnown RBP22.69■■□□□ 1.22
LINC01965-203ENST00000544869 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
LINC01965-203ENST00000544869 WIZO95785 1651 aa22.6■■□□□ 1.21
LINC01965-203ENST00000544869 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
LINC01965-203ENST00000544869 CADPSQ9ULU8 1353 aa22.53■■□□□ 1.2
LINC01965-203ENST00000544869 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
LINC01965-203ENST00000544869 WDR62O43379 1518 aa22.36■■□□□ 1.17
LINC01965-203ENST00000544869 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
LINC01965-203ENST00000544869 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
LINC01965-203ENST00000544869 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
LINC01965-203ENST00000544869 TOP2AP11388 1531 aaKnown RBP22.27■■□□□ 1.16
LINC01965-203ENST00000544869 CFTRP13569 1480 aa22.26■■□□□ 1.15
LINC01965-203ENST00000544869 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
LINC01965-203ENST00000544869 PRDM2Q13029 1718 aa22.07■■□□□ 1.12
LINC01965-203ENST00000544869 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
LINC01965-203ENST00000544869 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
LINC01965-203ENST00000544869 OSCARQ8IYS5 282 aa21.95■■□□□ 1.1
LINC01965-203ENST00000544869 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
LINC01965-203ENST00000544869 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
LINC01965-203ENST00000544869 IFT140Q96RY7 1462 aa21.84■■□□□ 1.09
LINC01965-203ENST00000544869 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
LINC01965-203ENST00000544869 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
LINC01965-203ENST00000544869 EIF4G3O43432 1585 aaKnown RBP21.73■■□□□ 1.07
LINC01965-203ENST00000544869 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
LINC01965-203ENST00000544869 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
LINC01965-203ENST00000544869 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
LINC01965-203ENST00000544869 TARBP1Q13395 1621 aaKnown RBP21.68■■□□□ 1.06
LINC01965-203ENST00000544869 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.06
LINC01965-203ENST00000544869 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
LINC01965-203ENST00000544869 CHD1O14646 1710 aa21.6■■□□□ 1.05
LINC01965-203ENST00000544869 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
LINC01965-203ENST00000544869 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.04
LINC01965-203ENST00000544869 SOGA1O94964 1423 aa21.54■■□□□ 1.04
LINC01965-203ENST00000544869 FBLN2P98095 1184 aa21.51■■□□□ 1.03
LINC01965-203ENST00000544869 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
LINC01965-203ENST00000544869 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
LINC01965-203ENST00000544869 CUX1P39880 1505 aa21.48■■□□□ 1.03
LINC01965-203ENST00000544869 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
LINC01965-203ENST00000544869 SNAPC4Q5SXM2 1469 aa21.42■■□□□ 1.02
LINC01965-203ENST00000544869 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
LINC01965-203ENST00000544869 ARAP1Q96P48 1450 aa21.39■■□□□ 1.02
LINC01965-203ENST00000544869 MAGI1Q96QZ7 1491 aaPredicted RBP21.34■■□□□ 1.01
LINC01965-203ENST00000544869 GRIN2BQ13224 1484 aa21.33■■□□□ 1.01
LINC01965-203ENST00000544869 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
LINC01965-203ENST00000544869 CHMP7Q8WUX9 453 aaPredicted RBP21.33■■□□□ 1.01
LINC01965-203ENST00000544869 CLASP1Q7Z460 1538 aa21.33■■□□□ 1
LINC01965-203ENST00000544869 PBRM1Q86U86 1689 aa21.29■■□□□ 1
LINC01965-203ENST00000544869 SYNJ1O43426 1573 aa21.29■■□□□ 1
LINC01965-203ENST00000544869 SYNJ2O15056 1496 aa21.27■■□□□ 1
LINC01965-203ENST00000544869 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
LINC01965-203ENST00000544869 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
LINC01965-203ENST00000544869 ABCA10Q8WWZ4 1543 aa21.23■□□□□ 0.99
LINC01965-203ENST00000544869 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
LINC01965-203ENST00000544869 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
LINC01965-203ENST00000544869 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
LINC01965-203ENST00000544869 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
LINC01965-203ENST00000544869 GRIN2AQ12879 1464 aa21.07■□□□□ 0.96
LINC01965-203ENST00000544869 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
LINC01965-203ENST00000544869 CEP170Q5SW79 1584 aa21.02■□□□□ 0.96
LINC01965-203ENST00000544869 ERCC6L2Q5T890 1561 aa21.02■□□□□ 0.96
LINC01965-203ENST00000544869 NUP160Q12769 1436 aa21■□□□□ 0.95
LINC01965-203ENST00000544869 FHAD1B1AJZ9 1412 aa20.98■□□□□ 0.95
LINC01965-203ENST00000544869 ERICH3Q5RHP9 1530 aa20.96■□□□□ 0.95
LINC01965-203ENST00000544869 SHROOM2Q13796 1616 aa20.93■□□□□ 0.94
LINC01965-203ENST00000544869 PRG4Q92954 1404 aaPredicted RBP20.81■□□□□ 0.92
LINC01965-203ENST00000544869 JPH4Q96JJ6 628 aa20.79■□□□□ 0.92
LINC01965-203ENST00000544869 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
LINC01965-203ENST00000544869 KIF13AQ9H1H9 1805 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms