RNA–Protein interactions for RNA: ENST00000544733.5

MAP3K4-216, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 3

Gene MAP3K4, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-216ENST00000544733 NISCHQ9Y2I1 1504 aa31.99■■■□□ 2.71
MAP3K4-216ENST00000544733 CCDC180Q9P1Z9 1646 aa28.62■■■□□ 2.17
MAP3K4-216ENST00000544733 ABCC9O60706 1549 aa28.32■■■□□ 2.12
MAP3K4-216ENST00000544733 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
MAP3K4-216ENST00000544733 DCAF8L2P0C7V8 631 aa26.93■■□□□ 1.9
MAP3K4-216ENST00000544733 NACADO15069 1562 aa26.92■■□□□ 1.9
MAP3K4-216ENST00000544733 UNC13AQ9UPW8 1703 aa26.61■■□□□ 1.85
MAP3K4-216ENST00000544733 MYO15BQ96JP2 1530 aa26.59■■□□□ 1.85
MAP3K4-216ENST00000544733 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
MAP3K4-216ENST00000544733 PABPN1Q86U42 306 aaKnown RBP eCLIP26.4■■□□□ 1.82
MAP3K4-216ENST00000544733 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.82
MAP3K4-216ENST00000544733 BICRAQ9NZM4 1560 aa26.27■■□□□ 1.8
MAP3K4-216ENST00000544733 DNAJC5BQ9UF47 199 aa26.22■■□□□ 1.79
MAP3K4-216ENST00000544733 SCRIBQ14160 1630 aa26.16■■□□□ 1.78
MAP3K4-216ENST00000544733 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
MAP3K4-216ENST00000544733 CC2D2AQ9P2K1 1620 aa25.61■■□□□ 1.69
MAP3K4-216ENST00000544733 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
MAP3K4-216ENST00000544733 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
MAP3K4-216ENST00000544733 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
MAP3K4-216ENST00000544733 BAZ1AQ9NRL2 1556 aaPredicted RBP24.83■■□□□ 1.57
MAP3K4-216ENST00000544733 ATAD2BQ9ULI0 1458 aa24.82■■□□□ 1.56
MAP3K4-216ENST00000544733 NCAPD3P42695 1498 aa24.81■■□□□ 1.56
MAP3K4-216ENST00000544733 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
MAP3K4-216ENST00000544733 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
MAP3K4-216ENST00000544733 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
MAP3K4-216ENST00000544733 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.53
MAP3K4-216ENST00000544733 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
MAP3K4-216ENST00000544733 WIZO95785 1651 aa24.47■■□□□ 1.51
MAP3K4-216ENST00000544733 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
MAP3K4-216ENST00000544733 NESP48681 1621 aa24.43■■□□□ 1.5
MAP3K4-216ENST00000544733 LAMC3Q9Y6N6 1575 aa24.27■■□□□ 1.48
MAP3K4-216ENST00000544733 RSF1Q96T23 1441 aaPredicted RBP24.25■■□□□ 1.47
MAP3K4-216ENST00000544733 CUX2O14529 1486 aa24.2■■□□□ 1.47
MAP3K4-216ENST00000544733 KIF21AQ7Z4S6 1674 aa24.2■■□□□ 1.46
MAP3K4-216ENST00000544733 THOC2Q8NI27 1593 aaKnown RBP24.12■■□□□ 1.45
MAP3K4-216ENST00000544733 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
MAP3K4-216ENST00000544733 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
MAP3K4-216ENST00000544733 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.44
MAP3K4-216ENST00000544733 CFTRP13569 1480 aa23.88■■□□□ 1.41
MAP3K4-216ENST00000544733 MRC2Q9UBG0 1479 aa23.88■■□□□ 1.41
MAP3K4-216ENST00000544733 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
MAP3K4-216ENST00000544733 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
MAP3K4-216ENST00000544733 PRDM2Q13029 1718 aa23.86■■□□□ 1.41
MAP3K4-216ENST00000544733 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
MAP3K4-216ENST00000544733 WDR62O43379 1518 aa23.81■■□□□ 1.4
MAP3K4-216ENST00000544733 DNAJC5Q9H3Z4 198 aa23.8■■□□□ 1.4
MAP3K4-216ENST00000544733 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
MAP3K4-216ENST00000544733 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
MAP3K4-216ENST00000544733 TOPBP1Q92547 1522 aa23.45■■□□□ 1.34
MAP3K4-216ENST00000544733 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
MAP3K4-216ENST00000544733 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
MAP3K4-216ENST00000544733 IFT140Q96RY7 1462 aa23.35■■□□□ 1.33
MAP3K4-216ENST00000544733 ZNF608Q9ULD9 1512 aaPredicted RBP23.32■■□□□ 1.32
MAP3K4-216ENST00000544733 EIF4G3O43432 1585 aaKnown RBP23.25■■□□□ 1.31
MAP3K4-216ENST00000544733 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
MAP3K4-216ENST00000544733 POLA1P09884 1462 aaPredicted RBP23.23■■□□□ 1.31
MAP3K4-216ENST00000544733 CUX1P39880 1505 aa23.18■■□□□ 1.3
MAP3K4-216ENST00000544733 RAD54L2Q9Y4B4 1467 aa23.16■■□□□ 1.3
MAP3K4-216ENST00000544733 OSCARQ8IYS5 282 aa23.15■■□□□ 1.3
MAP3K4-216ENST00000544733 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
MAP3K4-216ENST00000544733 AQRO60306 1485 aaKnown RBP eCLIP23.14■■□□□ 1.292e-6■■■■□ 22.4
MAP3K4-216ENST00000544733 SOGA1O94964 1423 aa23.11■■□□□ 1.29
MAP3K4-216ENST00000544733 CHD1O14646 1710 aa23.09■■□□□ 1.29
MAP3K4-216ENST00000544733 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
MAP3K4-216ENST00000544733 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
MAP3K4-216ENST00000544733 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
MAP3K4-216ENST00000544733 FBLN2P98095 1184 aa22.95■■□□□ 1.26
MAP3K4-216ENST00000544733 PBRM1Q86U86 1689 aa22.94■■□□□ 1.26
MAP3K4-216ENST00000544733 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
MAP3K4-216ENST00000544733 RIMBP3CA6NJZ7 1639 aa22.92■■□□□ 1.26
MAP3K4-216ENST00000544733 RIMBP3BA6NNM3 1639 aa22.92■■□□□ 1.26
MAP3K4-216ENST00000544733 RIMBP3Q9UFD9 1639 aa22.92■■□□□ 1.26
MAP3K4-216ENST00000544733 BIVM-ERCC5R4GMW8 1640 aa22.92■■□□□ 1.26
MAP3K4-216ENST00000544733 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
MAP3K4-216ENST00000544733 TOP2BQ02880 1626 aa22.9■■□□□ 1.26
MAP3K4-216ENST00000544733 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.25
MAP3K4-216ENST00000544733 GRIN2BQ13224 1484 aa22.87■■□□□ 1.25
MAP3K4-216ENST00000544733 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
MAP3K4-216ENST00000544733 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
MAP3K4-216ENST00000544733 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
MAP3K4-216ENST00000544733 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
MAP3K4-216ENST00000544733 ARHGEF11O15085 1522 aa22.83■■□□□ 1.25
MAP3K4-216ENST00000544733 CHMP7Q8WUX9 453 aaPredicted RBP22.79■■□□□ 1.24
MAP3K4-216ENST00000544733 SYNJ2O15056 1496 aa22.76■■□□□ 1.23
MAP3K4-216ENST00000544733 CLASP1Q7Z460 1538 aa22.71■■□□□ 1.23
MAP3K4-216ENST00000544733 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
MAP3K4-216ENST00000544733 CYB5RLQ6IPT4 315 aa22.63■■□□□ 1.21
MAP3K4-216ENST00000544733 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
MAP3K4-216ENST00000544733 GRIN2AQ12879 1464 aa22.6■■□□□ 1.21
MAP3K4-216ENST00000544733 ERICH3Q5RHP9 1530 aa22.59■■□□□ 1.21
MAP3K4-216ENST00000544733 FHAD1B1AJZ9 1412 aa22.55■■□□□ 1.2
MAP3K4-216ENST00000544733 CEP170Q5SW79 1584 aa22.54■■□□□ 1.2
MAP3K4-216ENST00000544733 NUP160Q12769 1436 aa22.47■■□□□ 1.19
MAP3K4-216ENST00000544733 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
MAP3K4-216ENST00000544733 KIF27Q86VH2 1401 aa22.41■■□□□ 1.18
MAP3K4-216ENST00000544733 SHROOM2Q13796 1616 aa22.39■■□□□ 1.18
MAP3K4-216ENST00000544733 CUL7Q14999 1698 aa22.39■■□□□ 1.17
MAP3K4-216ENST00000544733 IGF1RP08069 1367 aa22.35■■□□□ 1.17
MAP3K4-216ENST00000544733 RUSC2Q8N2Y8 1516 aa22.34■■□□□ 1.17
MAP3K4-216ENST00000544733 TRHP20396 242 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms