RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 NISCHQ9Y2I1 1504 aa37.15■■■■□ 3.54
COPS7A-220ENST00000544725 ABCC9O60706 1549 aa33.98■■■■□ 3.03
COPS7A-220ENST00000544725 CCDC180Q9P1Z9 1646 aa33.51■■■□□ 2.96
COPS7A-220ENST00000544725 DNAJC5BQ9UF47 199 aa32.26■■■□□ 2.75
COPS7A-220ENST00000544725 RB1CC1Q8TDY2 1594 aa32.16■■■□□ 2.74
COPS7A-220ENST00000544725 NACADO15069 1562 aa31.83■■■□□ 2.69
COPS7A-220ENST00000544725 DCAF8L2P0C7V8 631 aa31.6■■■□□ 2.65
COPS7A-220ENST00000544725 PABPN1Q86U42 306 aaKnown RBP eCLIP31.59■■■□□ 2.65
COPS7A-220ENST00000544725 UNC13AQ9UPW8 1703 aa31.31■■■□□ 2.6
COPS7A-220ENST00000544725 MYO15BQ96JP2 1530 aa31.26■■■□□ 2.59
COPS7A-220ENST00000544725 BICRAQ9NZM4 1560 aa31.19■■■□□ 2.58
COPS7A-220ENST00000544725 SHROOM4Q9ULL8 1493 aa30.81■■■□□ 2.52
COPS7A-220ENST00000544725 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.5
COPS7A-220ENST00000544725 DCAF1Q9Y4B6 1507 aa30.68■■■□□ 2.5
COPS7A-220ENST00000544725 CECR2Q9BXF3 1484 aa30.68■■■□□ 2.5
COPS7A-220ENST00000544725 CC2D2AQ9P2K1 1620 aa30.65■■■□□ 2.5
COPS7A-220ENST00000544725 SCRIBQ14160 1630 aa30.51■■■□□ 2.47
COPS7A-220ENST00000544725 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
COPS7A-220ENST00000544725 DNAJC5Q9H3Z4 198 aa30.01■■■□□ 2.39
COPS7A-220ENST00000544725 CUX2O14529 1486 aa29.51■■■□□ 2.31
COPS7A-220ENST00000544725 NCAPD3P42695 1498 aa29.41■■■□□ 2.3
COPS7A-220ENST00000544725 ERCC6Q03468 1493 aa29.41■■■□□ 2.3
COPS7A-220ENST00000544725 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
COPS7A-220ENST00000544725 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
COPS7A-220ENST00000544725 HMGXB3Q12766 1538 aa29.13■■■□□ 2.25
COPS7A-220ENST00000544725 SMARCA4P51532 1647 aa29.06■■■□□ 2.24
COPS7A-220ENST00000544725 NESP48681 1621 aa29.04■■■□□ 2.24
COPS7A-220ENST00000544725 BAZ1BQ9UIG0 1483 aaKnown RBP28.94■■■□□ 2.22
COPS7A-220ENST00000544725 BAZ1AQ9NRL2 1556 aaPredicted RBP28.88■■■□□ 2.21
COPS7A-220ENST00000544725 THOC2Q8NI27 1593 aaKnown RBP28.83■■■□□ 2.21
COPS7A-220ENST00000544725 PEG3Q9GZU2 1588 aa28.79■■■□□ 2.2
COPS7A-220ENST00000544725 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
COPS7A-220ENST00000544725 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
COPS7A-220ENST00000544725 KIF21AQ7Z4S6 1674 aa28.61■■■□□ 2.17
COPS7A-220ENST00000544725 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
COPS7A-220ENST00000544725 TRIM41Q8WV44 630 aa28.51■■■□□ 2.15
COPS7A-220ENST00000544725 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
COPS7A-220ENST00000544725 MRC2Q9UBG0 1479 aa28.44■■■□□ 2.14
COPS7A-220ENST00000544725 WDR62O43379 1518 aa28.36■■■□□ 2.13
COPS7A-220ENST00000544725 CEP164Q9UPV0 1460 aa28.24■■■□□ 2.11
COPS7A-220ENST00000544725 WIZO95785 1651 aa28.21■■■□□ 2.11
COPS7A-220ENST00000544725 FANCD2Q9BXW9 1451 aa28.16■■■□□ 2.1
COPS7A-220ENST00000544725 OSCARQ8IYS5 282 aa28.11■■■□□ 2.09
COPS7A-220ENST00000544725 CFTRP13569 1480 aa28.07■■■□□ 2.08
COPS7A-220ENST00000544725 URB2Q14146 1524 aaKnown RBP27.93■■■□□ 2.06
COPS7A-220ENST00000544725 RSF1Q96T23 1441 aaPredicted RBP27.88■■■□□ 2.05
COPS7A-220ENST00000544725 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
COPS7A-220ENST00000544725 RIMBP3CA6NJZ7 1639 aa27.71■■■□□ 2.03
COPS7A-220ENST00000544725 RIMBP3BA6NNM3 1639 aa27.71■■■□□ 2.03
COPS7A-220ENST00000544725 RIMBP3Q9UFD9 1639 aa27.71■■■□□ 2.03
COPS7A-220ENST00000544725 IFT140Q96RY7 1462 aa27.7■■■□□ 2.03
COPS7A-220ENST00000544725 ZNF608Q9ULD9 1512 aaPredicted RBP27.66■■■□□ 2.02
COPS7A-220ENST00000544725 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
COPS7A-220ENST00000544725 ARHGEF11O15085 1522 aa27.61■■■□□ 2.01
COPS7A-220ENST00000544725 CCDC88BA6NC98 1476 aa27.56■■■□□ 2
COPS7A-220ENST00000544725 TOPBP1Q92547 1522 aa27.56■■■□□ 2
COPS7A-220ENST00000544725 ABCC8Q09428 1581 aa27.52■■■□□ 2
COPS7A-220ENST00000544725 EIF4G3O43432 1585 aaKnown RBP27.47■■□□□ 1.99
COPS7A-220ENST00000544725 CYB5RLQ6IPT4 315 aa27.46■■□□□ 1.99
COPS7A-220ENST00000544725 DNMBPQ6XZF7 1577 aa27.42■■□□□ 1.98
COPS7A-220ENST00000544725 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.97
COPS7A-220ENST00000544725 TRHP20396 242 aaPredicted RBP27.33■■□□□ 1.97
COPS7A-220ENST00000544725 TARBP1Q13395 1621 aaKnown RBP27.33■■□□□ 1.97
COPS7A-220ENST00000544725 FBLN2P98095 1184 aa27.32■■□□□ 1.96
COPS7A-220ENST00000544725 CHD1O14646 1710 aa27.32■■□□□ 1.96
COPS7A-220ENST00000544725 ARAP1Q96P48 1450 aa27.3■■□□□ 1.96
COPS7A-220ENST00000544725 POLA1P09884 1462 aaPredicted RBP27.25■■□□□ 1.95
COPS7A-220ENST00000544725 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
COPS7A-220ENST00000544725 SOGA1O94964 1423 aa27.15■■□□□ 1.94
COPS7A-220ENST00000544725 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.94
COPS7A-220ENST00000544725 SNAPC4Q5SXM2 1469 aa27.08■■□□□ 1.93
COPS7A-220ENST00000544725 WDR97A6NE52 1622 aa27.06■■□□□ 1.92
COPS7A-220ENST00000544725 CHMP7Q8WUX9 453 aaPredicted RBP27.06■■□□□ 1.92
COPS7A-220ENST00000544725 CLASP1Q7Z460 1538 aa27.04■■□□□ 1.92
COPS7A-220ENST00000544725 FGD5Q6ZNL6 1462 aa27.02■■□□□ 1.92
COPS7A-220ENST00000544725 SYNJ1O43426 1573 aa27.01■■□□□ 1.92
COPS7A-220ENST00000544725 MAGI1Q96QZ7 1491 aaPredicted RBP27.01■■□□□ 1.91
COPS7A-220ENST00000544725 GRIN2BQ13224 1484 aa26.97■■□□□ 1.91
COPS7A-220ENST00000544725 SYNJ2O15056 1496 aa26.93■■□□□ 1.9
COPS7A-220ENST00000544725 CUX1P39880 1505 aa26.9■■□□□ 1.9
COPS7A-220ENST00000544725 AEBP2Q6ZN18 517 aaPredicted RBP26.89■■□□□ 1.9
COPS7A-220ENST00000544725 GAPVD1Q14C86 1478 aa26.81■■□□□ 1.88
COPS7A-220ENST00000544725 PBRM1Q86U86 1689 aa26.74■■□□□ 1.87
COPS7A-220ENST00000544725 ABCA10Q8WWZ4 1543 aa26.7■■□□□ 1.86
COPS7A-220ENST00000544725 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
COPS7A-220ENST00000544725 GRIN2AQ12879 1464 aa26.61■■□□□ 1.85
COPS7A-220ENST00000544725 ERCC6L2Q5T890 1561 aa26.56■■□□□ 1.84
COPS7A-220ENST00000544725 NUP160Q12769 1436 aa26.54■■□□□ 1.84
COPS7A-220ENST00000544725 WRNQ14191 1432 aaPredicted RBP eCLIP26.53■■□□□ 1.84
COPS7A-220ENST00000544725 CEP170Q5SW79 1584 aa26.51■■□□□ 1.83
COPS7A-220ENST00000544725 ADAMTS12P58397 1594 aa26.5■■□□□ 1.83
COPS7A-220ENST00000544725 FHAD1B1AJZ9 1412 aa26.46■■□□□ 1.83
COPS7A-220ENST00000544725 SHROOM2Q13796 1616 aa26.43■■□□□ 1.82
COPS7A-220ENST00000544725 ERICH3Q5RHP9 1530 aa26.36■■□□□ 1.81
COPS7A-220ENST00000544725 TOP2BQ02880 1626 aa26.36■■□□□ 1.81
COPS7A-220ENST00000544725 BIVM-ERCC5R4GMW8 1640 aa26.34■■□□□ 1.81
COPS7A-220ENST00000544725 PRG4Q92954 1404 aaPredicted RBP26.32■■□□□ 1.8
COPS7A-220ENST00000544725 SUPT5HO00267 1087 aaKnown RBP26.32■■□□□ 1.8
COPS7A-220ENST00000544725 JPH4Q96JJ6 628 aa26.29■■□□□ 1.8
COPS7A-220ENST00000544725 KIF13AQ9H1H9 1805 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms