RNA–Protein interactions for RNA: ENST00000544679.1

NDUFA9-209, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 2

Gene NDUFA9, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-209ENST00000544679 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
NDUFA9-209ENST00000544679 ABCC9O60706 1549 aa20.56■□□□□ 0.88
NDUFA9-209ENST00000544679 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
NDUFA9-209ENST00000544679 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
NDUFA9-209ENST00000544679 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
NDUFA9-209ENST00000544679 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
NDUFA9-209ENST00000544679 NACADO15069 1562 aa19.2■□□□□ 0.66
NDUFA9-209ENST00000544679 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
NDUFA9-209ENST00000544679 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
NDUFA9-209ENST00000544679 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
NDUFA9-209ENST00000544679 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
NDUFA9-209ENST00000544679 SHROOM4Q9ULL8 1493 aa18.59■□□□□ 0.57
NDUFA9-209ENST00000544679 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
NDUFA9-209ENST00000544679 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
NDUFA9-209ENST00000544679 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
NDUFA9-209ENST00000544679 ZCCHC6Q5VYS8 1495 aaKnown RBP18.38■□□□□ 0.53
NDUFA9-209ENST00000544679 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
NDUFA9-209ENST00000544679 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
NDUFA9-209ENST00000544679 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
NDUFA9-209ENST00000544679 CUX2O14529 1486 aa17.9■□□□□ 0.46
NDUFA9-209ENST00000544679 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
NDUFA9-209ENST00000544679 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
NDUFA9-209ENST00000544679 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
NDUFA9-209ENST00000544679 SMARCA2P51531 1590 aa17.58■□□□□ 0.41
NDUFA9-209ENST00000544679 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
NDUFA9-209ENST00000544679 NESP48681 1621 aa17.48■□□□□ 0.39
NDUFA9-209ENST00000544679 BAZ1BQ9UIG0 1483 aaKnown RBP17.48■□□□□ 0.39
NDUFA9-209ENST00000544679 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
NDUFA9-209ENST00000544679 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
NDUFA9-209ENST00000544679 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
NDUFA9-209ENST00000544679 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
NDUFA9-209ENST00000544679 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
NDUFA9-209ENST00000544679 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
NDUFA9-209ENST00000544679 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
NDUFA9-209ENST00000544679 CADPSQ9ULU8 1353 aa17.23■□□□□ 0.35
NDUFA9-209ENST00000544679 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
NDUFA9-209ENST00000544679 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
NDUFA9-209ENST00000544679 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
NDUFA9-209ENST00000544679 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
NDUFA9-209ENST00000544679 WDR62O43379 1518 aa17.08■□□□□ 0.32
NDUFA9-209ENST00000544679 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
NDUFA9-209ENST00000544679 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
NDUFA9-209ENST00000544679 WIZO95785 1651 aa16.89■□□□□ 0.29
NDUFA9-209ENST00000544679 CFTRP13569 1480 aa16.89■□□□□ 0.29
NDUFA9-209ENST00000544679 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
NDUFA9-209ENST00000544679 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
NDUFA9-209ENST00000544679 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
NDUFA9-209ENST00000544679 IFT140Q96RY7 1462 aa16.75■□□□□ 0.27
NDUFA9-209ENST00000544679 TOP2AP11388 1531 aaKnown RBP16.73■□□□□ 0.27
NDUFA9-209ENST00000544679 RIMBP3CA6NJZ7 1639 aa16.73■□□□□ 0.27
NDUFA9-209ENST00000544679 RIMBP3BA6NNM3 1639 aa16.73■□□□□ 0.27
NDUFA9-209ENST00000544679 RIMBP3Q9UFD9 1639 aa16.73■□□□□ 0.27
NDUFA9-209ENST00000544679 RSF1Q96T23 1441 aaPredicted RBP16.72■□□□□ 0.27
NDUFA9-209ENST00000544679 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
NDUFA9-209ENST00000544679 FBLN2P98095 1184 aa16.68■□□□□ 0.26
NDUFA9-209ENST00000544679 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
NDUFA9-209ENST00000544679 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
NDUFA9-209ENST00000544679 AEBP2Q6ZN18 517 aaPredicted RBP16.62■□□□□ 0.25
NDUFA9-209ENST00000544679 TOPBP1Q92547 1522 aa16.6■□□□□ 0.25
NDUFA9-209ENST00000544679 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
NDUFA9-209ENST00000544679 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
NDUFA9-209ENST00000544679 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.241e-6■■■■■ 31.8
NDUFA9-209ENST00000544679 EIF4G3O43432 1585 aaKnown RBP16.52■□□□□ 0.24
NDUFA9-209ENST00000544679 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
NDUFA9-209ENST00000544679 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
NDUFA9-209ENST00000544679 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
NDUFA9-209ENST00000544679 SOGA1O94964 1423 aa16.43■□□□□ 0.22
NDUFA9-209ENST00000544679 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
NDUFA9-209ENST00000544679 CHD1O14646 1710 aa16.41■□□□□ 0.22
NDUFA9-209ENST00000544679 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
NDUFA9-209ENST00000544679 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
NDUFA9-209ENST00000544679 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
NDUFA9-209ENST00000544679 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
NDUFA9-209ENST00000544679 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
NDUFA9-209ENST00000544679 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
NDUFA9-209ENST00000544679 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
NDUFA9-209ENST00000544679 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
NDUFA9-209ENST00000544679 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
NDUFA9-209ENST00000544679 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.19
NDUFA9-209ENST00000544679 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
NDUFA9-209ENST00000544679 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
NDUFA9-209ENST00000544679 CUX1P39880 1505 aa16.14■□□□□ 0.17
NDUFA9-209ENST00000544679 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
NDUFA9-209ENST00000544679 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
NDUFA9-209ENST00000544679 GRIN2AQ12879 1464 aa16.04■□□□□ 0.16
NDUFA9-209ENST00000544679 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
NDUFA9-209ENST00000544679 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
NDUFA9-209ENST00000544679 FHAD1B1AJZ9 1412 aa15.99■□□□□ 0.15
NDUFA9-209ENST00000544679 FAM69CQ0P6D2 419 aa15.98■□□□□ 0.15
NDUFA9-209ENST00000544679 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
NDUFA9-209ENST00000544679 CEP170Q5SW79 1584 aa15.97■□□□□ 0.15
NDUFA9-209ENST00000544679 NUP160Q12769 1436 aa15.97■□□□□ 0.15
NDUFA9-209ENST00000544679 JPH4Q96JJ6 628 aa15.95■□□□□ 0.14
NDUFA9-209ENST00000544679 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
NDUFA9-209ENST00000544679 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
NDUFA9-209ENST00000544679 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
NDUFA9-209ENST00000544679 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
NDUFA9-209ENST00000544679 ERICH3Q5RHP9 1530 aa15.87■□□□□ 0.13
NDUFA9-209ENST00000544679 SHROOM2Q13796 1616 aa15.86■□□□□ 0.13
NDUFA9-209ENST00000544679 ABCC10Q5T3U5 1492 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms