RNA–Protein interactions for RNA: ENST00000544575.1

COA4-205, Transcript of cytochrome c oxidase assembly factor 4 homolog, humanhuman

TSL 3

Gene COA4, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA4-205ENST00000544575 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
COA4-205ENST00000544575 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.29
COA4-205ENST00000544575 ABCC9O60706 1549 aa22.49■■□□□ 1.19
COA4-205ENST00000544575 RB1CC1Q8TDY2 1594 aa21.66■■□□□ 1.06
COA4-205ENST00000544575 NACADO15069 1562 aa21.6■■□□□ 1.05
COA4-205ENST00000544575 ZCCHC6Q5VYS8 1495 aaKnown RBP21.54■■□□□ 1.04
COA4-205ENST00000544575 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
COA4-205ENST00000544575 DCAF1Q9Y4B6 1507 aa21.35■■□□□ 1.01
COA4-205ENST00000544575 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
COA4-205ENST00000544575 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
COA4-205ENST00000544575 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
COA4-205ENST00000544575 BICRAQ9NZM4 1560 aa21.04■□□□□ 0.96
COA4-205ENST00000544575 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.93
COA4-205ENST00000544575 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
COA4-205ENST00000544575 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
COA4-205ENST00000544575 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
COA4-205ENST00000544575 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
COA4-205ENST00000544575 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
COA4-205ENST00000544575 SMARCA4P51532 1647 aa20.1■□□□□ 0.81
COA4-205ENST00000544575 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.8
COA4-205ENST00000544575 SMARCA2P51531 1590 aa19.92■□□□□ 0.78
COA4-205ENST00000544575 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
COA4-205ENST00000544575 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
COA4-205ENST00000544575 PEG3Q9GZU2 1588 aa19.88■□□□□ 0.77
COA4-205ENST00000544575 HMGXB3Q12766 1538 aa19.88■□□□□ 0.77
COA4-205ENST00000544575 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
COA4-205ENST00000544575 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.76
COA4-205ENST00000544575 WIZO95785 1651 aa19.73■□□□□ 0.75
COA4-205ENST00000544575 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
COA4-205ENST00000544575 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
COA4-205ENST00000544575 NESP48681 1621 aa19.47■□□□□ 0.71
COA4-205ENST00000544575 LAMC3Q9Y6N6 1575 aa19.44■□□□□ 0.7
COA4-205ENST00000544575 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
COA4-205ENST00000544575 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
COA4-205ENST00000544575 THOC2Q8NI27 1593 aaKnown RBP19.3■□□□□ 0.68
COA4-205ENST00000544575 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
COA4-205ENST00000544575 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
COA4-205ENST00000544575 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
COA4-205ENST00000544575 CUX2O14529 1486 aa19.2■□□□□ 0.66
COA4-205ENST00000544575 CCDC88BA6NC98 1476 aa19.19■□□□□ 0.66
COA4-205ENST00000544575 CFTRP13569 1480 aa19.18■□□□□ 0.66
COA4-205ENST00000544575 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
COA4-205ENST00000544575 FANCD2Q9BXW9 1451 aa19.11■□□□□ 0.65
COA4-205ENST00000544575 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
COA4-205ENST00000544575 WDR62O43379 1518 aa19.08■□□□□ 0.64
COA4-205ENST00000544575 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
COA4-205ENST00000544575 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
COA4-205ENST00000544575 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
COA4-205ENST00000544575 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
COA4-205ENST00000544575 ABCC8Q09428 1581 aa18.74■□□□□ 0.59
COA4-205ENST00000544575 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
COA4-205ENST00000544575 CUX1P39880 1505 aa18.69■□□□□ 0.58
COA4-205ENST00000544575 IFT140Q96RY7 1462 aa18.68■□□□□ 0.58
COA4-205ENST00000544575 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
COA4-205ENST00000544575 EIF4G3O43432 1585 aaKnown RBP18.67■□□□□ 0.58
COA4-205ENST00000544575 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
COA4-205ENST00000544575 ZNF608Q9ULD9 1512 aaPredicted RBP18.63■□□□□ 0.57
COA4-205ENST00000544575 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
COA4-205ENST00000544575 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
COA4-205ENST00000544575 BIVM-ERCC5R4GMW8 1640 aa18.58■□□□□ 0.56
COA4-205ENST00000544575 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
COA4-205ENST00000544575 RAD54L2Q9Y4B4 1467 aa18.55■□□□□ 0.56
COA4-205ENST00000544575 TOP2BQ02880 1626 aa18.53■□□□□ 0.56
COA4-205ENST00000544575 DNAJC5Q9H3Z4 198 aa18.49■□□□□ 0.55
COA4-205ENST00000544575 SOGA1O94964 1423 aa18.49■□□□□ 0.55
COA4-205ENST00000544575 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
COA4-205ENST00000544575 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
COA4-205ENST00000544575 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.54
COA4-205ENST00000544575 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
COA4-205ENST00000544575 CHD1O14646 1710 aa18.45■□□□□ 0.54
COA4-205ENST00000544575 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
COA4-205ENST00000544575 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
COA4-205ENST00000544575 SNAPC4Q5SXM2 1469 aa18.37■□□□□ 0.53
COA4-205ENST00000544575 GRIN2BQ13224 1484 aa18.33■□□□□ 0.53
COA4-205ENST00000544575 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.52
COA4-205ENST00000544575 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
COA4-205ENST00000544575 ADAMTS12P58397 1594 aa18.29■□□□□ 0.52
COA4-205ENST00000544575 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
COA4-205ENST00000544575 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
COA4-205ENST00000544575 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
COA4-205ENST00000544575 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
COA4-205ENST00000544575 RIMBP3CA6NJZ7 1639 aa18.18■□□□□ 0.5
COA4-205ENST00000544575 RIMBP3BA6NNM3 1639 aa18.18■□□□□ 0.5
COA4-205ENST00000544575 RIMBP3Q9UFD9 1639 aa18.18■□□□□ 0.5
COA4-205ENST00000544575 FBLN2P98095 1184 aa18.15■□□□□ 0.5
COA4-205ENST00000544575 GRIN2AQ12879 1464 aa18.14■□□□□ 0.49
COA4-205ENST00000544575 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
COA4-205ENST00000544575 CEP170Q5SW79 1584 aa18.11■□□□□ 0.49
COA4-205ENST00000544575 CUL7Q14999 1698 aa18.11■□□□□ 0.49
COA4-205ENST00000544575 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
COA4-205ENST00000544575 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
COA4-205ENST00000544575 KIF27Q86VH2 1401 aa18.07■□□□□ 0.48
COA4-205ENST00000544575 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
COA4-205ENST00000544575 NUP160Q12769 1436 aa18.03■□□□□ 0.48
COA4-205ENST00000544575 SHROOM2Q13796 1616 aa18■□□□□ 0.47
COA4-205ENST00000544575 ARAP1Q96P48 1450 aa17.99■□□□□ 0.47
COA4-205ENST00000544575 IGF1RP08069 1367 aa17.95■□□□□ 0.46
COA4-205ENST00000544575 ERCC6L2Q5T890 1561 aa17.94■□□□□ 0.46
COA4-205ENST00000544575 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
COA4-205ENST00000544575 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms