RNA–Protein interactions for RNA: ENST00000544521.1

IGHMBP2-208, Transcript of immunoglobulin mu DNA binding protein 2, humanhuman

TSL 1 (best)

Gene IGHMBP2, Length 1,683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHMBP2-208ENST00000544521 NISCHQ9Y2I1 1504 aa43.63■■■■■ 4.57
IGHMBP2-208ENST00000544521 CCDC180Q9P1Z9 1646 aa38.24■■■■□ 3.71
IGHMBP2-208ENST00000544521 ZCCHC6Q5VYS8 1495 aaKnown RBP36.58■■■■□ 3.45
IGHMBP2-208ENST00000544521 ABCC9O60706 1549 aa36.45■■■■□ 3.43
IGHMBP2-208ENST00000544521 DCAF1Q9Y4B6 1507 aa36.11■■■■□ 3.37
IGHMBP2-208ENST00000544521 DCAF8L2P0C7V8 631 aa36.07■■■■□ 3.36
IGHMBP2-208ENST00000544521 MYO15BQ96JP2 1530 aa35.84■■■■□ 3.33
IGHMBP2-208ENST00000544521 NACADO15069 1562 aa35.71■■■■□ 3.31
IGHMBP2-208ENST00000544521 RB1CC1Q8TDY2 1594 aa35.48■■■■□ 3.27
IGHMBP2-208ENST00000544521 SHROOM4Q9ULL8 1493 aa35.23■■■■□ 3.23
IGHMBP2-208ENST00000544521 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
IGHMBP2-208ENST00000544521 UNC13AQ9UPW8 1703 aa34.7■■■■□ 3.14
IGHMBP2-208ENST00000544521 BICRAQ9NZM4 1560 aa34.4■■■■□ 3.1
IGHMBP2-208ENST00000544521 PABPN1Q86U42 306 aaKnown RBP eCLIP34.28■■■■□ 3.08
IGHMBP2-208ENST00000544521 CECR2Q9BXF3 1484 aa33.9■■■■□ 3.02
IGHMBP2-208ENST00000544521 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
IGHMBP2-208ENST00000544521 SUPT5HO00267 1087 aaKnown RBP33.71■■■□□ 2.99
IGHMBP2-208ENST00000544521 RSF1Q96T23 1441 aaPredicted RBP33.69■■■□□ 2.98
IGHMBP2-208ENST00000544521 MROH2BQ7Z745 1585 aa33.66■■■□□ 2.98
IGHMBP2-208ENST00000544521 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
IGHMBP2-208ENST00000544521 EIF4G1Q04637 1599 aaKnown RBP33.4■■■□□ 2.94
IGHMBP2-208ENST00000544521 WIZO95785 1651 aa33.35■■■□□ 2.93
IGHMBP2-208ENST00000544521 PEG3Q9GZU2 1588 aa33.24■■■□□ 2.91
IGHMBP2-208ENST00000544521 ATAD2BQ9ULI0 1458 aa33.16■■■□□ 2.9
IGHMBP2-208ENST00000544521 SMARCA2P51531 1590 aa33.15■■■□□ 2.9
IGHMBP2-208ENST00000544521 TOP2AP11388 1531 aaKnown RBP33.04■■■□□ 2.88
IGHMBP2-208ENST00000544521 CC2D2AQ9P2K1 1620 aa32.99■■■□□ 2.87
IGHMBP2-208ENST00000544521 NCAPD3P42695 1498 aa32.96■■■□□ 2.87
IGHMBP2-208ENST00000544521 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.87
IGHMBP2-208ENST00000544521 HMGXB3Q12766 1538 aa32.89■■■□□ 2.86
IGHMBP2-208ENST00000544521 CCDC88BA6NC98 1476 aa32.68■■■□□ 2.82
IGHMBP2-208ENST00000544521 DNAJC5BQ9UF47 199 aa32.48■■■□□ 2.79
IGHMBP2-208ENST00000544521 CFTRP13569 1480 aa32.12■■■□□ 2.73
IGHMBP2-208ENST00000544521 CHIC1Q5VXU3 224 aa32.11■■■□□ 2.73
IGHMBP2-208ENST00000544521 CADPSQ9ULU8 1353 aa32.08■■■□□ 2.73
IGHMBP2-208ENST00000544521 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
IGHMBP2-208ENST00000544521 LAMC3Q9Y6N6 1575 aa31.89■■■□□ 2.7
IGHMBP2-208ENST00000544521 NESP48681 1621 aa31.87■■■□□ 2.69
IGHMBP2-208ENST00000544521 ABCC8Q09428 1581 aa31.83■■■□□ 2.69
IGHMBP2-208ENST00000544521 TRIM41Q8WV44 630 aa31.76■■■□□ 2.67
IGHMBP2-208ENST00000544521 WRNQ14191 1432 aaPredicted RBP eCLIP31.72■■■□□ 2.67
IGHMBP2-208ENST00000544521 FANCD2Q9BXW9 1451 aa31.71■■■□□ 2.67
IGHMBP2-208ENST00000544521 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
IGHMBP2-208ENST00000544521 SYNJ1O43426 1573 aa31.59■■■□□ 2.65
IGHMBP2-208ENST00000544521 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
IGHMBP2-208ENST00000544521 CUX1P39880 1505 aa31.51■■■□□ 2.64
IGHMBP2-208ENST00000544521 TOP2BQ02880 1626 aa31.51■■■□□ 2.63
IGHMBP2-208ENST00000544521 KIF21AQ7Z4S6 1674 aa31.49■■■□□ 2.63
IGHMBP2-208ENST00000544521 BIVM-ERCC5R4GMW8 1640 aa31.48■■■□□ 2.63
IGHMBP2-208ENST00000544521 DNMBPQ6XZF7 1577 aa31.37■■■□□ 2.61
IGHMBP2-208ENST00000544521 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
IGHMBP2-208ENST00000544521 TOPBP1Q92547 1522 aa31.33■■■□□ 2.61
IGHMBP2-208ENST00000544521 ERCC6Q03468 1493 aa31.31■■■□□ 2.6
IGHMBP2-208ENST00000544521 MRC2Q9UBG0 1479 aa31.28■■■□□ 2.6
IGHMBP2-208ENST00000544521 FGD5Q6ZNL6 1462 aa31.23■■■□□ 2.59
IGHMBP2-208ENST00000544521 SOGA1O94964 1423 aa31.17■■■□□ 2.58
IGHMBP2-208ENST00000544521 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
IGHMBP2-208ENST00000544521 WDR62O43379 1518 aa31.13■■■□□ 2.57
IGHMBP2-208ENST00000544521 FAM9AQ8IZU1 332 aaPredicted RBP31.12■■■□□ 2.57
IGHMBP2-208ENST00000544521 THOC2Q8NI27 1593 aaKnown RBP31.11■■■□□ 2.57
IGHMBP2-208ENST00000544521 EEA1Q15075 1411 aa31.09■■■□□ 2.57
IGHMBP2-208ENST00000544521 RUSC2Q8N2Y8 1516 aa31.06■■■□□ 2.56
IGHMBP2-208ENST00000544521 RAD54L2Q9Y4B4 1467 aa31.02■■■□□ 2.56
IGHMBP2-208ENST00000544521 ABCA10Q8WWZ4 1543 aa30.97■■■□□ 2.55
IGHMBP2-208ENST00000544521 KIF27Q86VH2 1401 aa30.96■■■□□ 2.55
IGHMBP2-208ENST00000544521 CUX2O14529 1486 aa30.96■■■□□ 2.55
IGHMBP2-208ENST00000544521 CSRNP3Q8WYN3 585 aa30.92■■■□□ 2.54
IGHMBP2-208ENST00000544521 WDR97A6NE52 1622 aa30.88■■■□□ 2.53
IGHMBP2-208ENST00000544521 TARBP1Q13395 1621 aaKnown RBP30.88■■■□□ 2.53
IGHMBP2-208ENST00000544521 IFT140Q96RY7 1462 aa30.85■■■□□ 2.53
IGHMBP2-208ENST00000544521 LOC105371045A0A1W2PR82 267 aa30.81■■■□□ 2.52
IGHMBP2-208ENST00000544521 TDRD9Q8NDG6 1382 aaKnown RBP30.75■■■□□ 2.51
IGHMBP2-208ENST00000544521 ABCA5Q8WWZ7 1642 aa30.73■■■□□ 2.51
IGHMBP2-208ENST00000544521 IGF1RP08069 1367 aa30.72■■■□□ 2.51
IGHMBP2-208ENST00000544521 GAPVD1Q14C86 1478 aa30.69■■■□□ 2.5
IGHMBP2-208ENST00000544521 KIF21BO75037 1637 aa30.68■■■□□ 2.5
IGHMBP2-208ENST00000544521 PRXQ9BXM0 1461 aa30.66■■■□□ 2.5
IGHMBP2-208ENST00000544521 EHMT2Q96KQ7 1210 aa30.66■■■□□ 2.5
IGHMBP2-208ENST00000544521 ZNF608Q9ULD9 1512 aaPredicted RBP30.65■■■□□ 2.5
IGHMBP2-208ENST00000544521 AQRO60306 1485 aaKnown RBP eCLIP30.62■■■□□ 2.49
IGHMBP2-208ENST00000544521 GOLGA3Q08378 1498 aa30.62■■■□□ 2.49
IGHMBP2-208ENST00000544521 ERICH3Q5RHP9 1530 aa30.6■■■□□ 2.49
IGHMBP2-208ENST00000544521 RAPGEF2Q9Y4G8 1499 aa30.57■■■□□ 2.48
IGHMBP2-208ENST00000544521 CARMIL1Q5VZK9 1371 aa30.56■■■□□ 2.48
IGHMBP2-208ENST00000544521 EIF4G3O43432 1585 aaKnown RBP30.55■■■□□ 2.48
IGHMBP2-208ENST00000544521 GRIN2BQ13224 1484 aa30.52■■■□□ 2.48
IGHMBP2-208ENST00000544521 CUL7Q14999 1698 aa30.52■■■□□ 2.48
IGHMBP2-208ENST00000544521 PBRM1Q86U86 1689 aa30.52■■■□□ 2.48
IGHMBP2-208ENST00000544521 UBTFP17480 764 aaKnown RBP30.46■■■□□ 2.47
IGHMBP2-208ENST00000544521 TNIKQ9UKE5 1360 aa30.45■■■□□ 2.47
IGHMBP2-208ENST00000544521 FHAD1B1AJZ9 1412 aa30.37■■■□□ 2.45
IGHMBP2-208ENST00000544521 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
IGHMBP2-208ENST00000544521 SNAPC4Q5SXM2 1469 aa30.35■■■□□ 2.45
IGHMBP2-208ENST00000544521 MAGI1Q96QZ7 1491 aaPredicted RBP30.32■■■□□ 2.44
IGHMBP2-208ENST00000544521 CEP162Q5TB80 1403 aa30.24■■■□□ 2.43
IGHMBP2-208ENST00000544521 SYNJ2O15056 1496 aa30.19■■■□□ 2.42
IGHMBP2-208ENST00000544521 GRIN2AQ12879 1464 aa30.14■■■□□ 2.42
IGHMBP2-208ENST00000544521 CHMP7Q8WUX9 453 aaPredicted RBP30.12■■■□□ 2.41
IGHMBP2-208ENST00000544521 CLIP1P30622 1438 aa30.1■■■□□ 2.41
IGHMBP2-208ENST00000544521 CTTNBP2Q8WZ74 1663 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms