RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-213ENST00000544382 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
CLPB-213ENST00000544382 CCDC180Q9P1Z9 1646 aa27.53■■■□□ 2
CLPB-213ENST00000544382 ABCC9O60706 1549 aa27.01■■□□□ 1.91
CLPB-213ENST00000544382 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
CLPB-213ENST00000544382 NACADO15069 1562 aa25.91■■□□□ 1.74
CLPB-213ENST00000544382 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
CLPB-213ENST00000544382 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
CLPB-213ENST00000544382 ZCCHC6Q5VYS8 1495 aaKnown RBP25.65■■□□□ 1.7
CLPB-213ENST00000544382 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
CLPB-213ENST00000544382 UNC13AQ9UPW8 1703 aa25.36■■□□□ 1.65
CLPB-213ENST00000544382 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.62
CLPB-213ENST00000544382 DNAJC5BQ9UF47 199 aa25.13■■□□□ 1.61
CLPB-213ENST00000544382 BICRAQ9NZM4 1560 aa25.11■■□□□ 1.61
CLPB-213ENST00000544382 SCRIBQ14160 1630 aa25.07■■□□□ 1.6
CLPB-213ENST00000544382 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.58
CLPB-213ENST00000544382 EIF4G1Q04637 1599 aaKnown RBP24.51■■□□□ 1.51
CLPB-213ENST00000544382 CC2D2AQ9P2K1 1620 aa24.45■■□□□ 1.5
CLPB-213ENST00000544382 CECR2Q9BXF3 1484 aa24.32■■□□□ 1.48
CLPB-213ENST00000544382 SMARCA4P51532 1647 aa23.96■■□□□ 1.43
CLPB-213ENST00000544382 BAZ1AQ9NRL2 1556 aaPredicted RBP23.94■■□□□ 1.42
CLPB-213ENST00000544382 SMARCA2P51531 1590 aa23.88■■□□□ 1.41
CLPB-213ENST00000544382 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
CLPB-213ENST00000544382 ATAD2BQ9ULI0 1458 aa23.85■■□□□ 1.41
CLPB-213ENST00000544382 HMGXB3Q12766 1538 aa23.77■■□□□ 1.4
CLPB-213ENST00000544382 DNAJC5Q9H3Z4 198 aa23.74■■□□□ 1.39
CLPB-213ENST00000544382 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
CLPB-213ENST00000544382 MROH2BQ7Z745 1585 aa23.72■■□□□ 1.39
CLPB-213ENST00000544382 BAZ1BQ9UIG0 1483 aaKnown RBP23.69■■□□□ 1.38
CLPB-213ENST00000544382 WIZO95785 1651 aa23.48■■□□□ 1.35
CLPB-213ENST00000544382 RSF1Q96T23 1441 aaPredicted RBP23.41■■□□□ 1.34
CLPB-213ENST00000544382 ERCC6Q03468 1493 aa23.37■■□□□ 1.33
CLPB-213ENST00000544382 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
CLPB-213ENST00000544382 NESP48681 1621 aa23.3■■□□□ 1.32
CLPB-213ENST00000544382 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
CLPB-213ENST00000544382 CADPSQ9ULU8 1353 aa23.17■■□□□ 1.3
CLPB-213ENST00000544382 PDS5BQ9NTI5 1447 aa23.16■■□□□ 1.3
CLPB-213ENST00000544382 CUX2O14529 1486 aa23.16■■□□□ 1.3
CLPB-213ENST00000544382 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
CLPB-213ENST00000544382 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
CLPB-213ENST00000544382 CFTRP13569 1480 aa22.99■■□□□ 1.27
CLPB-213ENST00000544382 CCDC88BA6NC98 1476 aa22.94■■□□□ 1.26
CLPB-213ENST00000544382 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
CLPB-213ENST00000544382 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
CLPB-213ENST00000544382 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
CLPB-213ENST00000544382 PRDM2Q13029 1718 aa22.89■■□□□ 1.26
CLPB-213ENST00000544382 WDR62O43379 1518 aa22.83■■□□□ 1.25
CLPB-213ENST00000544382 SUPT5HO00267 1087 aaKnown RBP22.72■■□□□ 1.23
CLPB-213ENST00000544382 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
CLPB-213ENST00000544382 ABCC8Q09428 1581 aa22.58■■□□□ 1.2
CLPB-213ENST00000544382 TOPBP1Q92547 1522 aa22.52■■□□□ 1.2
CLPB-213ENST00000544382 DNMBPQ6XZF7 1577 aa22.51■■□□□ 1.19
CLPB-213ENST00000544382 IFT140Q96RY7 1462 aa22.45■■□□□ 1.18
CLPB-213ENST00000544382 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
CLPB-213ENST00000544382 ZNF608Q9ULD9 1512 aaPredicted RBP22.3■■□□□ 1.16
CLPB-213ENST00000544382 CUX1P39880 1505 aa22.28■■□□□ 1.16
CLPB-213ENST00000544382 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
CLPB-213ENST00000544382 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
CLPB-213ENST00000544382 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
CLPB-213ENST00000544382 SOGA1O94964 1423 aa22.23■■□□□ 1.15
CLPB-213ENST00000544382 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
CLPB-213ENST00000544382 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
CLPB-213ENST00000544382 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
CLPB-213ENST00000544382 OSCARQ8IYS5 282 aa22.16■■□□□ 1.14
CLPB-213ENST00000544382 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.141e-6■■■■■ 33.8
CLPB-213ENST00000544382 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
CLPB-213ENST00000544382 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
CLPB-213ENST00000544382 TOP2BQ02880 1626 aa22.08■■□□□ 1.13
CLPB-213ENST00000544382 BIVM-ERCC5R4GMW8 1640 aa22.08■■□□□ 1.13
CLPB-213ENST00000544382 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
CLPB-213ENST00000544382 ABCA10Q8WWZ4 1543 aa22.03■■□□□ 1.12
CLPB-213ENST00000544382 GRIN2BQ13224 1484 aa22.02■■□□□ 1.12
CLPB-213ENST00000544382 CHD1O14646 1710 aa22.01■■□□□ 1.11
CLPB-213ENST00000544382 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
CLPB-213ENST00000544382 SNAPC4Q5SXM2 1469 aa21.99■■□□□ 1.11
CLPB-213ENST00000544382 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
CLPB-213ENST00000544382 FBLN2P98095 1184 aa21.98■■□□□ 1.11
CLPB-213ENST00000544382 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
CLPB-213ENST00000544382 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
CLPB-213ENST00000544382 CHMP7Q8WUX9 453 aaPredicted RBP21.91■■□□□ 1.1
CLPB-213ENST00000544382 SYNJ2O15056 1496 aa21.89■■□□□ 1.09
CLPB-213ENST00000544382 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
CLPB-213ENST00000544382 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
CLPB-213ENST00000544382 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
CLPB-213ENST00000544382 ERICH3Q5RHP9 1530 aa21.79■■□□□ 1.08
CLPB-213ENST00000544382 ARHGEF11O15085 1522 aa21.78■■□□□ 1.08
CLPB-213ENST00000544382 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
CLPB-213ENST00000544382 CLASP1Q7Z460 1538 aa21.74■■□□□ 1.07
CLPB-213ENST00000544382 FHAD1B1AJZ9 1412 aa21.73■■□□□ 1.07
CLPB-213ENST00000544382 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
CLPB-213ENST00000544382 KIF27Q86VH2 1401 aa21.69■■□□□ 1.06
CLPB-213ENST00000544382 NUP160Q12769 1436 aa21.61■■□□□ 1.05
CLPB-213ENST00000544382 CUL7Q14999 1698 aa21.6■■□□□ 1.05
CLPB-213ENST00000544382 CEP170Q5SW79 1584 aa21.59■■□□□ 1.05
CLPB-213ENST00000544382 CYB5RLQ6IPT4 315 aa21.59■■□□□ 1.05
CLPB-213ENST00000544382 ARAP1Q96P48 1450 aa21.58■■□□□ 1.05
CLPB-213ENST00000544382 IGF1RP08069 1367 aa21.55■■□□□ 1.04
CLPB-213ENST00000544382 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
CLPB-213ENST00000544382 CARMIL1Q5VZK9 1371 aa21.46■■□□□ 1.03
CLPB-213ENST00000544382 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
CLPB-213ENST00000544382 JPH4Q96JJ6 628 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms