RNA–Protein interactions for RNA: ENST00000544377.1

SLC3A2-221, Transcript of solute carrier family 3 member 2, humanhuman

TSL 4

Gene SLC3A2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-221ENST00000544377 NISCHQ9Y2I1 1504 aa40.71■■■■■ 4.11
SLC3A2-221ENST00000544377 CCDC180Q9P1Z9 1646 aa36.35■■■■□ 3.41
SLC3A2-221ENST00000544377 ABCC9O60706 1549 aa35.86■■■■□ 3.33
SLC3A2-221ENST00000544377 RB1CC1Q8TDY2 1594 aa34.33■■■■□ 3.09
SLC3A2-221ENST00000544377 DCAF8L2P0C7V8 631 aa34.3■■■■□ 3.08
SLC3A2-221ENST00000544377 NACADO15069 1562 aa34.19■■■■□ 3.06
SLC3A2-221ENST00000544377 ZCCHC6Q5VYS8 1495 aaKnown RBP33.85■■■■□ 3.01
SLC3A2-221ENST00000544377 MYO15BQ96JP2 1530 aa33.78■■■■□ 3
SLC3A2-221ENST00000544377 UNC13AQ9UPW8 1703 aa33.68■■■□□ 2.98
SLC3A2-221ENST00000544377 DCAF1Q9Y4B6 1507 aa33.58■■■□□ 2.97
SLC3A2-221ENST00000544377 PABPN1Q86U42 306 aaKnown RBP eCLIP33.45■■■□□ 2.95
SLC3A2-221ENST00000544377 BICRAQ9NZM4 1560 aa33.27■■■□□ 2.92
SLC3A2-221ENST00000544377 SCRIBQ14160 1630 aa33.24■■■□□ 2.91
SLC3A2-221ENST00000544377 DNAJC5BQ9UF47 199 aa33.03■■■□□ 2.88
SLC3A2-221ENST00000544377 SHROOM4Q9ULL8 1493 aa32.78■■■□□ 2.84
SLC3A2-221ENST00000544377 EIF4G1Q04637 1599 aaKnown RBP32.44■■■□□ 2.78
SLC3A2-221ENST00000544377 CC2D2AQ9P2K1 1620 aa32.41■■■□□ 2.78
SLC3A2-221ENST00000544377 CECR2Q9BXF3 1484 aa32.18■■■□□ 2.74
SLC3A2-221ENST00000544377 SMARCA4P51532 1647 aa31.71■■■□□ 2.67
SLC3A2-221ENST00000544377 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
SLC3A2-221ENST00000544377 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
SLC3A2-221ENST00000544377 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
SLC3A2-221ENST00000544377 NCAPD3P42695 1498 aa31.48■■■□□ 2.63
SLC3A2-221ENST00000544377 MROH2BQ7Z745 1585 aa31.42■■■□□ 2.62
SLC3A2-221ENST00000544377 HMGXB3Q12766 1538 aa31.36■■■□□ 2.61
SLC3A2-221ENST00000544377 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
SLC3A2-221ENST00000544377 PEG3Q9GZU2 1588 aa31.29■■■□□ 2.6
SLC3A2-221ENST00000544377 WIZO95785 1651 aa31.15■■■□□ 2.58
SLC3A2-221ENST00000544377 NESP48681 1621 aa30.95■■■□□ 2.54
SLC3A2-221ENST00000544377 ERCC6Q03468 1493 aa30.94■■■□□ 2.54
SLC3A2-221ENST00000544377 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
SLC3A2-221ENST00000544377 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
SLC3A2-221ENST00000544377 TOP2AP11388 1531 aaKnown RBP30.72■■■□□ 2.51
SLC3A2-221ENST00000544377 KIF21AQ7Z4S6 1674 aa30.65■■■□□ 2.5
SLC3A2-221ENST00000544377 CADPSQ9ULU8 1353 aa30.59■■■□□ 2.49
SLC3A2-221ENST00000544377 CUX2O14529 1486 aa30.58■■■□□ 2.49
SLC3A2-221ENST00000544377 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
SLC3A2-221ENST00000544377 THOC2Q8NI27 1593 aaKnown RBP30.51■■■□□ 2.47
SLC3A2-221ENST00000544377 CCDC88BA6NC98 1476 aa30.35■■■□□ 2.45
SLC3A2-221ENST00000544377 CFTRP13569 1480 aa30.35■■■□□ 2.45
SLC3A2-221ENST00000544377 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
SLC3A2-221ENST00000544377 CEP164Q9UPV0 1460 aa30.31■■■□□ 2.44
SLC3A2-221ENST00000544377 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
SLC3A2-221ENST00000544377 MRC2Q9UBG0 1479 aa30.29■■■□□ 2.44
SLC3A2-221ENST00000544377 WDR62O43379 1518 aa30.17■■■□□ 2.42
SLC3A2-221ENST00000544377 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
SLC3A2-221ENST00000544377 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.39
SLC3A2-221ENST00000544377 DNAJC5Q9H3Z4 198 aa29.9■■■□□ 2.38
SLC3A2-221ENST00000544377 TOPBP1Q92547 1522 aa29.79■■■□□ 2.36
SLC3A2-221ENST00000544377 DNMBPQ6XZF7 1577 aa29.75■■■□□ 2.35
SLC3A2-221ENST00000544377 ABCC8Q09428 1581 aa29.73■■■□□ 2.35
SLC3A2-221ENST00000544377 IFT140Q96RY7 1462 aa29.63■■■□□ 2.33
SLC3A2-221ENST00000544377 ZNF608Q9ULD9 1512 aaPredicted RBP29.55■■■□□ 2.32
SLC3A2-221ENST00000544377 POLA1P09884 1462 aaPredicted RBP29.51■■■□□ 2.31
SLC3A2-221ENST00000544377 CUX1P39880 1505 aa29.49■■■□□ 2.31
SLC3A2-221ENST00000544377 TARBP1Q13395 1621 aaKnown RBP29.49■■■□□ 2.31
SLC3A2-221ENST00000544377 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
SLC3A2-221ENST00000544377 FGD5Q6ZNL6 1462 aa29.44■■■□□ 2.3
SLC3A2-221ENST00000544377 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
SLC3A2-221ENST00000544377 SOGA1O94964 1423 aa29.4■■■□□ 2.3
SLC3A2-221ENST00000544377 AQRO60306 1485 aaKnown RBP eCLIP29.36■■■□□ 2.29
SLC3A2-221ENST00000544377 OSCARQ8IYS5 282 aa29.3■■■□□ 2.28
SLC3A2-221ENST00000544377 TDRD9Q8NDG6 1382 aaKnown RBP29.27■■■□□ 2.28
SLC3A2-221ENST00000544377 WDR97A6NE52 1622 aa29.23■■■□□ 2.27
SLC3A2-221ENST00000544377 CHD1O14646 1710 aa29.23■■■□□ 2.27
SLC3A2-221ENST00000544377 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.26
SLC3A2-221ENST00000544377 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.26
SLC3A2-221ENST00000544377 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
SLC3A2-221ENST00000544377 TOP2BQ02880 1626 aa29.17■■■□□ 2.26
SLC3A2-221ENST00000544377 FBLN2P98095 1184 aa29.16■■■□□ 2.26
SLC3A2-221ENST00000544377 PBRM1Q86U86 1689 aa29.14■■■□□ 2.26
SLC3A2-221ENST00000544377 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
SLC3A2-221ENST00000544377 ABCA10Q8WWZ4 1543 aa29.08■■■□□ 2.25
SLC3A2-221ENST00000544377 GRIN2BQ13224 1484 aa29.07■■■□□ 2.24
SLC3A2-221ENST00000544377 GAPVD1Q14C86 1478 aa29.06■■■□□ 2.24
SLC3A2-221ENST00000544377 ABCA5Q8WWZ7 1642 aa29.04■■■□□ 2.24
SLC3A2-221ENST00000544377 TRIM41Q8WV44 630 aa29.01■■■□□ 2.23
SLC3A2-221ENST00000544377 MAGI1Q96QZ7 1491 aaPredicted RBP29■■■□□ 2.23
SLC3A2-221ENST00000544377 CHMP7Q8WUX9 453 aaPredicted RBP28.96■■■□□ 2.23
SLC3A2-221ENST00000544377 RIMBP3CA6NJZ7 1639 aa28.94■■■□□ 2.22
SLC3A2-221ENST00000544377 RIMBP3BA6NNM3 1639 aa28.94■■■□□ 2.22
SLC3A2-221ENST00000544377 RIMBP3Q9UFD9 1639 aa28.94■■■□□ 2.22
SLC3A2-221ENST00000544377 SYNJ2O15056 1496 aa28.9■■■□□ 2.22
SLC3A2-221ENST00000544377 ARHGEF11O15085 1522 aa28.85■■■□□ 2.21
SLC3A2-221ENST00000544377 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
SLC3A2-221ENST00000544377 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
SLC3A2-221ENST00000544377 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
SLC3A2-221ENST00000544377 GRIN2AQ12879 1464 aa28.7■■■□□ 2.18
SLC3A2-221ENST00000544377 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
SLC3A2-221ENST00000544377 CYB5RLQ6IPT4 315 aa28.63■■■□□ 2.17
SLC3A2-221ENST00000544377 CEP170Q5SW79 1584 aa28.61■■■□□ 2.17
SLC3A2-221ENST00000544377 KIF27Q86VH2 1401 aa28.6■■■□□ 2.17
SLC3A2-221ENST00000544377 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
SLC3A2-221ENST00000544377 NUP160Q12769 1436 aa28.52■■■□□ 2.16
SLC3A2-221ENST00000544377 CUL7Q14999 1698 aa28.51■■■□□ 2.15
SLC3A2-221ENST00000544377 IGF1RP08069 1367 aa28.46■■■□□ 2.15
SLC3A2-221ENST00000544377 ERCC6L2Q5T890 1561 aa28.41■■■□□ 2.14
SLC3A2-221ENST00000544377 SHROOM2Q13796 1616 aa28.4■■■□□ 2.14
SLC3A2-221ENST00000544377 RUSC2Q8N2Y8 1516 aa28.38■■■□□ 2.13
SLC3A2-221ENST00000544377 CARMIL1Q5VZK9 1371 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms