RNA–Protein interactions for RNA: ENST00000544188.1

TMED2-205, Transcript of transmembrane p24 trafficking protein 2, humanhuman

TSL 2

Gene TMED2, Length 433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED2-205ENST00000544188 NISCHQ9Y2I1 1504 aa28.73■■■□□ 2.19
TMED2-205ENST00000544188 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
TMED2-205ENST00000544188 ABCC9O60706 1549 aa25.09■■□□□ 1.61
TMED2-205ENST00000544188 RB1CC1Q8TDY2 1594 aa24.12■■□□□ 1.45
TMED2-205ENST00000544188 NACADO15069 1562 aa24.06■■□□□ 1.44
TMED2-205ENST00000544188 DCAF8L2P0C7V8 631 aa24.01■■□□□ 1.43
TMED2-205ENST00000544188 ZCCHC6Q5VYS8 1495 aaKnown RBP23.93■■□□□ 1.42
TMED2-205ENST00000544188 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.42
TMED2-205ENST00000544188 DCAF1Q9Y4B6 1507 aa23.77■■□□□ 1.4
TMED2-205ENST00000544188 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
TMED2-205ENST00000544188 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
TMED2-205ENST00000544188 BICRAQ9NZM4 1560 aa23.38■■□□□ 1.33
TMED2-205ENST00000544188 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
TMED2-205ENST00000544188 SHROOM4Q9ULL8 1493 aa23.14■■□□□ 1.29
TMED2-205ENST00000544188 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
TMED2-205ENST00000544188 EIF4G1Q04637 1599 aaKnown RBP22.77■■□□□ 1.24
TMED2-205ENST00000544188 CC2D2AQ9P2K1 1620 aa22.69■■□□□ 1.22
TMED2-205ENST00000544188 CECR2Q9BXF3 1484 aa22.55■■□□□ 1.2
TMED2-205ENST00000544188 SMARCA4P51532 1647 aa22.31■■□□□ 1.16
TMED2-205ENST00000544188 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
TMED2-205ENST00000544188 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
TMED2-205ENST00000544188 NCAPD3P42695 1498 aa22.19■■□□□ 1.14
TMED2-205ENST00000544188 SMARCA2P51531 1590 aa22.17■■□□□ 1.14
TMED2-205ENST00000544188 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.13
TMED2-205ENST00000544188 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
TMED2-205ENST00000544188 PEG3Q9GZU2 1588 aa22.09■■□□□ 1.13
TMED2-205ENST00000544188 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
TMED2-205ENST00000544188 WIZO95785 1651 aa21.9■■□□□ 1.1
TMED2-205ENST00000544188 RSF1Q96T23 1441 aaPredicted RBP21.86■■□□□ 1.09
TMED2-205ENST00000544188 NESP48681 1621 aa21.69■■□□□ 1.06
TMED2-205ENST00000544188 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
TMED2-205ENST00000544188 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
TMED2-205ENST00000544188 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
TMED2-205ENST00000544188 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
TMED2-205ENST00000544188 PDS5BQ9NTI5 1447 aa21.48■■□□□ 1.03
TMED2-205ENST00000544188 CUX2O14529 1486 aa21.44■■□□□ 1.02
TMED2-205ENST00000544188 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
TMED2-205ENST00000544188 CCDC88BA6NC98 1476 aa21.4■■□□□ 1.02
TMED2-205ENST00000544188 CFTRP13569 1480 aa21.4■■□□□ 1.02
TMED2-205ENST00000544188 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
TMED2-205ENST00000544188 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
TMED2-205ENST00000544188 CEP164Q9UPV0 1460 aa21.3■■□□□ 1
TMED2-205ENST00000544188 MRC2Q9UBG0 1479 aa21.28■■□□□ 1
TMED2-205ENST00000544188 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
TMED2-205ENST00000544188 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
TMED2-205ENST00000544188 WDR62O43379 1518 aa21.21■□□□□ 0.99
TMED2-205ENST00000544188 URB2Q14146 1524 aaKnown RBP21.1■□□□□ 0.97
TMED2-205ENST00000544188 TOPBP1Q92547 1522 aa20.95■□□□□ 0.94
TMED2-205ENST00000544188 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
TMED2-205ENST00000544188 DNMBPQ6XZF7 1577 aa20.94■□□□□ 0.94
TMED2-205ENST00000544188 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
TMED2-205ENST00000544188 DNAJC5Q9H3Z4 198 aa20.81■□□□□ 0.92
TMED2-205ENST00000544188 POLA1P09884 1462 aaPredicted RBP20.78■□□□□ 0.92
TMED2-205ENST00000544188 CUX1P39880 1505 aa20.78■□□□□ 0.92
TMED2-205ENST00000544188 ZNF608Q9ULD9 1512 aaPredicted RBP20.75■□□□□ 0.91
TMED2-205ENST00000544188 TARBP1Q13395 1621 aaKnown RBP20.74■□□□□ 0.91
TMED2-205ENST00000544188 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
TMED2-205ENST00000544188 EIF4G3O43432 1585 aaKnown RBP20.69■□□□□ 0.9
TMED2-205ENST00000544188 SOGA1O94964 1423 aa20.69■□□□□ 0.9
TMED2-205ENST00000544188 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
TMED2-205ENST00000544188 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.891e-6■■□□□ 11.4
TMED2-205ENST00000544188 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
TMED2-205ENST00000544188 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
TMED2-205ENST00000544188 BIVM-ERCC5R4GMW8 1640 aa20.59■□□□□ 0.89
TMED2-205ENST00000544188 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
TMED2-205ENST00000544188 TOP2BQ02880 1626 aa20.58■□□□□ 0.89
TMED2-205ENST00000544188 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
TMED2-205ENST00000544188 ABCA10Q8WWZ4 1543 aa20.51■□□□□ 0.87
TMED2-205ENST00000544188 OSCARQ8IYS5 282 aa20.5■□□□□ 0.87
TMED2-205ENST00000544188 GRIN2BQ13224 1484 aa20.46■□□□□ 0.87
TMED2-205ENST00000544188 GAPVD1Q14C86 1478 aa20.45■□□□□ 0.86
TMED2-205ENST00000544188 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
TMED2-205ENST00000544188 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
TMED2-205ENST00000544188 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
TMED2-205ENST00000544188 CHD1O14646 1710 aa20.42■□□□□ 0.86
TMED2-205ENST00000544188 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
TMED2-205ENST00000544188 FBLN2P98095 1184 aa20.38■□□□□ 0.85
TMED2-205ENST00000544188 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
TMED2-205ENST00000544188 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
TMED2-205ENST00000544188 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.84
TMED2-205ENST00000544188 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
TMED2-205ENST00000544188 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
TMED2-205ENST00000544188 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
TMED2-205ENST00000544188 RIMBP3CA6NJZ7 1639 aa20.21■□□□□ 0.83
TMED2-205ENST00000544188 RIMBP3BA6NNM3 1639 aa20.21■□□□□ 0.83
TMED2-205ENST00000544188 RIMBP3Q9UFD9 1639 aa20.21■□□□□ 0.83
TMED2-205ENST00000544188 GRIN2AQ12879 1464 aa20.2■□□□□ 0.82
TMED2-205ENST00000544188 ARHGEF11O15085 1522 aa20.2■□□□□ 0.82
TMED2-205ENST00000544188 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
TMED2-205ENST00000544188 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
TMED2-205ENST00000544188 CEP170Q5SW79 1584 aa20.11■□□□□ 0.81
TMED2-205ENST00000544188 NUP160Q12769 1436 aa20.1■□□□□ 0.81
TMED2-205ENST00000544188 IGF1RP08069 1367 aa20.09■□□□□ 0.81
TMED2-205ENST00000544188 CUL7Q14999 1698 aa20.09■□□□□ 0.81
TMED2-205ENST00000544188 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
TMED2-205ENST00000544188 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
TMED2-205ENST00000544188 CARMIL1Q5VZK9 1371 aa19.98■□□□□ 0.79
TMED2-205ENST00000544188 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
TMED2-205ENST00000544188 SHROOM2Q13796 1616 aa19.96■□□□□ 0.79
TMED2-205ENST00000544188 ERCC6L2Q5T890 1561 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms