RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 NISCHQ9Y2I1 1504 aa46.28■■■■■ 5
TDG-208ENST00000544060 CCDC180Q9P1Z9 1646 aa41.4■■■■■ 4.22
TDG-208ENST00000544060 ABCC9O60706 1549 aa40.97■■■■■ 4.15
TDG-208ENST00000544060 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
TDG-208ENST00000544060 NACADO15069 1562 aa39.02■■■■□ 3.84
TDG-208ENST00000544060 DCAF8L2P0C7V8 631 aa38.93■■■■□ 3.82
TDG-208ENST00000544060 MYO15BQ96JP2 1530 aa38.59■■■■□ 3.77
TDG-208ENST00000544060 ZCCHC6Q5VYS8 1495 aaKnown RBP38.46■■■■□ 3.75
TDG-208ENST00000544060 UNC13AQ9UPW8 1703 aa38.29■■■■□ 3.72
TDG-208ENST00000544060 DCAF1Q9Y4B6 1507 aa38.25■■■■□ 3.71
TDG-208ENST00000544060 PABPN1Q86U42 306 aaKnown RBP eCLIP38.18■■■■□ 3.7
TDG-208ENST00000544060 BICRAQ9NZM4 1560 aa37.98■■■■□ 3.67
TDG-208ENST00000544060 DNAJC5BQ9UF47 199 aa37.95■■■■□ 3.67
TDG-208ENST00000544060 SCRIBQ14160 1630 aa37.76■■■■□ 3.63
TDG-208ENST00000544060 SHROOM4Q9ULL8 1493 aa37.57■■■■□ 3.6
TDG-208ENST00000544060 EIF4G1Q04637 1599 aaKnown RBP37.05■■■■□ 3.52
TDG-208ENST00000544060 CC2D2AQ9P2K1 1620 aa37.03■■■■□ 3.52
TDG-208ENST00000544060 CECR2Q9BXF3 1484 aa36.86■■■■□ 3.49
TDG-208ENST00000544060 SMARCA4P51532 1647 aa36.05■■■■□ 3.36
TDG-208ENST00000544060 NCAPD3P42695 1498 aa35.98■■■■□ 3.35
TDG-208ENST00000544060 BAZ1AQ9NRL2 1556 aaPredicted RBP35.93■■■■□ 3.34
TDG-208ENST00000544060 ATAD2BQ9ULI0 1458 aa35.93■■■■□ 3.34
TDG-208ENST00000544060 SMARCA2P51531 1590 aa35.91■■■■□ 3.34
TDG-208ENST00000544060 HMGXB3Q12766 1538 aa35.79■■■■□ 3.32
TDG-208ENST00000544060 BAZ1BQ9UIG0 1483 aaKnown RBP35.67■■■■□ 3.3
TDG-208ENST00000544060 MROH2BQ7Z745 1585 aa35.66■■■■□ 3.3
TDG-208ENST00000544060 PEG3Q9GZU2 1588 aa35.66■■■■□ 3.3
TDG-208ENST00000544060 ERCC6Q03468 1493 aa35.39■■■■□ 3.26
TDG-208ENST00000544060 NESP48681 1621 aa35.28■■■■□ 3.24
TDG-208ENST00000544060 WIZO95785 1651 aa35.28■■■■□ 3.24
TDG-208ENST00000544060 LAMC3Q9Y6N6 1575 aa35.15■■■■□ 3.22
TDG-208ENST00000544060 CUX2O14529 1486 aa35.15■■■■□ 3.22
TDG-208ENST00000544060 RSF1Q96T23 1441 aaPredicted RBP35.06■■■■□ 3.2
TDG-208ENST00000544060 PDS5BQ9NTI5 1447 aa34.94■■■■□ 3.18
TDG-208ENST00000544060 CADPSQ9ULU8 1353 aa34.92■■■■□ 3.18
TDG-208ENST00000544060 KIF21AQ7Z4S6 1674 aa34.89■■■■□ 3.18
TDG-208ENST00000544060 THOC2Q8NI27 1593 aaKnown RBP34.87■■■■□ 3.17
TDG-208ENST00000544060 TOP2AP11388 1531 aaKnown RBP34.87■■■■□ 3.17
TDG-208ENST00000544060 CFTRP13569 1480 aa34.6■■■■□ 3.13
TDG-208ENST00000544060 MRC2Q9UBG0 1479 aa34.6■■■■□ 3.13
TDG-208ENST00000544060 DNAJC5Q9H3Z4 198 aa34.58■■■■□ 3.13
TDG-208ENST00000544060 CEP164Q9UPV0 1460 aa34.57■■■■□ 3.12
TDG-208ENST00000544060 FANCD2Q9BXW9 1451 aa34.54■■■■□ 3.12
TDG-208ENST00000544060 WDR62O43379 1518 aa34.5■■■■□ 3.11
TDG-208ENST00000544060 CCDC88BA6NC98 1476 aa34.45■■■■□ 3.1
TDG-208ENST00000544060 PRDM2Q13029 1718 aa34.37■■■■□ 3.09
TDG-208ENST00000544060 URB2Q14146 1524 aaKnown RBP34.21■■■■□ 3.07
TDG-208ENST00000544060 TOPBP1Q92547 1522 aa33.93■■■■□ 3.02
TDG-208ENST00000544060 ABCC8Q09428 1581 aa33.91■■■■□ 3.02
TDG-208ENST00000544060 SUPT5HO00267 1087 aaKnown RBP33.88■■■■□ 3.01
TDG-208ENST00000544060 DNMBPQ6XZF7 1577 aa33.87■■■■□ 3.01
TDG-208ENST00000544060 IFT140Q96RY7 1462 aa33.84■■■■□ 3.01
TDG-208ENST00000544060 ZNF608Q9ULD9 1512 aaPredicted RBP33.71■■■□□ 2.99
TDG-208ENST00000544060 POLA1P09884 1462 aaPredicted RBP33.61■■■□□ 2.97
TDG-208ENST00000544060 EIF4G3O43432 1585 aaKnown RBP33.6■■■□□ 2.97
TDG-208ENST00000544060 OSCARQ8IYS5 282 aa33.6■■■□□ 2.97
TDG-208ENST00000544060 TARBP1Q13395 1621 aaKnown RBP33.59■■■□□ 2.97
TDG-208ENST00000544060 CUX1P39880 1505 aa33.49■■■□□ 2.95
TDG-208ENST00000544060 FGD5Q6ZNL6 1462 aa33.48■■■□□ 2.95
TDG-208ENST00000544060 SOGA1O94964 1423 aa33.47■■■□□ 2.95
TDG-208ENST00000544060 AQRO60306 1485 aaKnown RBP eCLIP33.47■■■□□ 2.954e-6■■■■■ 31
TDG-208ENST00000544060 RAD54L2Q9Y4B4 1467 aa33.47■■■□□ 2.95
TDG-208ENST00000544060 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
TDG-208ENST00000544060 WDR97A6NE52 1622 aa33.32■■■□□ 2.92
TDG-208ENST00000544060 TRIM41Q8WV44 630 aa33.32■■■□□ 2.92
TDG-208ENST00000544060 CHD1O14646 1710 aa33.28■■■□□ 2.92
TDG-208ENST00000544060 FBLN2P98095 1184 aa33.22■■■□□ 2.91
TDG-208ENST00000544060 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
TDG-208ENST00000544060 GRIN2BQ13224 1484 aa33.15■■■□□ 2.9
TDG-208ENST00000544060 RIMBP3CA6NJZ7 1639 aa33.13■■■□□ 2.89
TDG-208ENST00000544060 RIMBP3BA6NNM3 1639 aa33.13■■■□□ 2.89
TDG-208ENST00000544060 RIMBP3Q9UFD9 1639 aa33.13■■■□□ 2.89
TDG-208ENST00000544060 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
TDG-208ENST00000544060 ABCA10Q8WWZ4 1543 aa33.11■■■□□ 2.89
TDG-208ENST00000544060 MAGI1Q96QZ7 1491 aaPredicted RBP33.11■■■□□ 2.89
TDG-208ENST00000544060 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
TDG-208ENST00000544060 TOP2BQ02880 1626 aa33.09■■■□□ 2.89
TDG-208ENST00000544060 GAPVD1Q14C86 1478 aa33.08■■■□□ 2.89
TDG-208ENST00000544060 PBRM1Q86U86 1689 aa33.07■■■□□ 2.89
TDG-208ENST00000544060 ARHGEF11O15085 1522 aa33.06■■■□□ 2.88
TDG-208ENST00000544060 SYNJ1O43426 1573 aa33.05■■■□□ 2.88
TDG-208ENST00000544060 ABCA5Q8WWZ7 1642 aa33.03■■■□□ 2.88
TDG-208ENST00000544060 CHMP7Q8WUX9 453 aaPredicted RBP33.03■■■□□ 2.88
TDG-208ENST00000544060 SYNJ2O15056 1496 aa32.99■■■□□ 2.87
TDG-208ENST00000544060 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
TDG-208ENST00000544060 CYB5RLQ6IPT4 315 aa32.78■■■□□ 2.84
TDG-208ENST00000544060 ADAMTS12P58397 1594 aa32.77■■■□□ 2.84
TDG-208ENST00000544060 ARAP1Q96P48 1450 aa32.75■■■□□ 2.83
TDG-208ENST00000544060 GRIN2AQ12879 1464 aa32.72■■■□□ 2.83
TDG-208ENST00000544060 ERICH3Q5RHP9 1530 aa32.72■■■□□ 2.83
TDG-208ENST00000544060 FHAD1B1AJZ9 1412 aa32.68■■■□□ 2.82
TDG-208ENST00000544060 CEP170Q5SW79 1584 aa32.57■■■□□ 2.8
TDG-208ENST00000544060 NUP160Q12769 1436 aa32.56■■■□□ 2.8
TDG-208ENST00000544060 KIF27Q86VH2 1401 aa32.47■■■□□ 2.79
TDG-208ENST00000544060 SHROOM2Q13796 1616 aa32.39■■■□□ 2.78
TDG-208ENST00000544060 ERCC6L2Q5T890 1561 aa32.37■■■□□ 2.77
TDG-208ENST00000544060 CUL7Q14999 1698 aa32.36■■■□□ 2.77
TDG-208ENST00000544060 IGF1RP08069 1367 aa32.34■■■□□ 2.77
TDG-208ENST00000544060 TRHP20396 242 aaPredicted RBP32.33■■■□□ 2.77
TDG-208ENST00000544060 RUSC2Q8N2Y8 1516 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms