RNA–Protein interactions for RNA: ENST00000544051.5

MMAB-209, Transcript of methylmalonic aciduria (cobalamin deficiency) cblB type, humanhuman

TSL 3

Gene MMAB, Length 1,089 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMAB-209ENST00000544051 NISCHQ9Y2I1 1504 aa43.88■■■■■ 4.61
MMAB-209ENST00000544051 CCDC180Q9P1Z9 1646 aa39.13■■■■□ 3.85
MMAB-209ENST00000544051 ABCC9O60706 1549 aa38.66■■■■□ 3.78
MMAB-209ENST00000544051 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
MMAB-209ENST00000544051 NACADO15069 1562 aa36.91■■■■□ 3.5
MMAB-209ENST00000544051 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
MMAB-209ENST00000544051 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
MMAB-209ENST00000544051 ZCCHC6Q5VYS8 1495 aaKnown RBP36.45■■■■□ 3.43
MMAB-209ENST00000544051 DCAF1Q9Y4B6 1507 aa36.29■■■■□ 3.4
MMAB-209ENST00000544051 PABPN1Q86U42 306 aaKnown RBP eCLIP36.1■■■■□ 3.37
MMAB-209ENST00000544051 UNC13AQ9UPW8 1703 aa36.1■■■■□ 3.37
MMAB-209ENST00000544051 BICRAQ9NZM4 1560 aa35.9■■■■□ 3.34
MMAB-209ENST00000544051 DNAJC5BQ9UF47 199 aa35.84■■■■□ 3.33
MMAB-209ENST00000544051 SCRIBQ14160 1630 aa35.67■■■■□ 3.3
MMAB-209ENST00000544051 SHROOM4Q9ULL8 1493 aa35.55■■■■□ 3.28
MMAB-209ENST00000544051 EIF4G1Q04637 1599 aaKnown RBP35■■■■□ 3.19
MMAB-209ENST00000544051 CC2D2AQ9P2K1 1620 aa34.93■■■■□ 3.18
MMAB-209ENST00000544051 CECR2Q9BXF3 1484 aa34.8■■■■□ 3.16
MMAB-209ENST00000544051 SMARCA4P51532 1647 aa34.09■■■■□ 3.05
MMAB-209ENST00000544051 NCAPD3P42695 1498 aa34.08■■■■□ 3.05
MMAB-209ENST00000544051 BAZ1AQ9NRL2 1556 aaPredicted RBP34.03■■■■□ 3.04
MMAB-209ENST00000544051 ATAD2BQ9ULI0 1458 aa34.03■■■■□ 3.04
MMAB-209ENST00000544051 SMARCA2P51531 1590 aa33.98■■■■□ 3.03
MMAB-209ENST00000544051 HMGXB3Q12766 1538 aa33.85■■■■□ 3.01
MMAB-209ENST00000544051 MROH2BQ7Z745 1585 aa33.8■■■■□ 3
MMAB-209ENST00000544051 PEG3Q9GZU2 1588 aa33.78■■■■□ 3
MMAB-209ENST00000544051 BAZ1BQ9UIG0 1483 aaKnown RBP33.74■■■□□ 2.99
MMAB-209ENST00000544051 WIZO95785 1651 aa33.38■■■□□ 2.93
MMAB-209ENST00000544051 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
MMAB-209ENST00000544051 NESP48681 1621 aa33.34■■■□□ 2.93
MMAB-209ENST00000544051 RSF1Q96T23 1441 aaPredicted RBP33.31■■■□□ 2.92
MMAB-209ENST00000544051 LAMC3Q9Y6N6 1575 aa33.21■■■□□ 2.91
MMAB-209ENST00000544051 CUX2O14529 1486 aa33.15■■■□□ 2.9
MMAB-209ENST00000544051 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
MMAB-209ENST00000544051 PDS5BQ9NTI5 1447 aa33.05■■■□□ 2.88
MMAB-209ENST00000544051 TOP2AP11388 1531 aaKnown RBP33.03■■■□□ 2.88
MMAB-209ENST00000544051 KIF21AQ7Z4S6 1674 aa32.88■■■□□ 2.85
MMAB-209ENST00000544051 THOC2Q8NI27 1593 aaKnown RBP32.88■■■□□ 2.85
MMAB-209ENST00000544051 CFTRP13569 1480 aa32.8■■■□□ 2.84
MMAB-209ENST00000544051 MRC2Q9UBG0 1479 aa32.7■■■□□ 2.83
MMAB-209ENST00000544051 FANCD2Q9BXW9 1451 aa32.68■■■□□ 2.82
MMAB-209ENST00000544051 CEP164Q9UPV0 1460 aa32.67■■■□□ 2.82
MMAB-209ENST00000544051 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
MMAB-209ENST00000544051 DNAJC5Q9H3Z4 198 aa32.6■■■□□ 2.81
MMAB-209ENST00000544051 WDR62O43379 1518 aa32.58■■■□□ 2.81
MMAB-209ENST00000544051 PRDM2Q13029 1718 aa32.43■■■□□ 2.78
MMAB-209ENST00000544051 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
MMAB-209ENST00000544051 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
MMAB-209ENST00000544051 ABCC8Q09428 1581 aa32.12■■■□□ 2.73
MMAB-209ENST00000544051 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
MMAB-209ENST00000544051 DNMBPQ6XZF7 1577 aa32.03■■■□□ 2.72
MMAB-209ENST00000544051 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
MMAB-209ENST00000544051 ZNF608Q9ULD9 1512 aaPredicted RBP31.88■■■□□ 2.69
MMAB-209ENST00000544051 POLA1P09884 1462 aaPredicted RBP31.81■■■□□ 2.68
MMAB-209ENST00000544051 TARBP1Q13395 1621 aaKnown RBP31.76■■■□□ 2.67
MMAB-209ENST00000544051 OSCARQ8IYS5 282 aa31.76■■■□□ 2.67
MMAB-209ENST00000544051 CUX1P39880 1505 aa31.73■■■□□ 2.67
MMAB-209ENST00000544051 EIF4G3O43432 1585 aaKnown RBP31.7■■■□□ 2.67
MMAB-209ENST00000544051 SOGA1O94964 1423 aa31.7■■■□□ 2.67
MMAB-209ENST00000544051 FGD5Q6ZNL6 1462 aa31.68■■■□□ 2.66
MMAB-209ENST00000544051 AQRO60306 1485 aaKnown RBP eCLIP31.67■■■□□ 2.667e-9■■■■■ 34.8
MMAB-209ENST00000544051 RAD54L2Q9Y4B4 1467 aa31.67■■■□□ 2.66
MMAB-209ENST00000544051 TDRD9Q8NDG6 1382 aaKnown RBP31.57■■■□□ 2.64
MMAB-209ENST00000544051 WDR97A6NE52 1622 aa31.51■■■□□ 2.63
MMAB-209ENST00000544051 WRNQ14191 1432 aaPredicted RBP eCLIP31.41■■■□□ 2.62
MMAB-209ENST00000544051 FBLN2P98095 1184 aa31.4■■■□□ 2.62
MMAB-209ENST00000544051 GRIN2BQ13224 1484 aa31.38■■■□□ 2.61
MMAB-209ENST00000544051 ABCA10Q8WWZ4 1543 aa31.37■■■□□ 2.61
MMAB-209ENST00000544051 CHD1O14646 1710 aa31.35■■■□□ 2.61
MMAB-209ENST00000544051 TOP2BQ02880 1626 aa31.35■■■□□ 2.61
MMAB-209ENST00000544051 SNAPC4Q5SXM2 1469 aa31.35■■■□□ 2.61
MMAB-209ENST00000544051 TRIM41Q8WV44 630 aa31.34■■■□□ 2.61
MMAB-209ENST00000544051 BIVM-ERCC5R4GMW8 1640 aa31.33■■■□□ 2.61
MMAB-209ENST00000544051 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
MMAB-209ENST00000544051 GAPVD1Q14C86 1478 aa31.32■■■□□ 2.6
MMAB-209ENST00000544051 SYNJ1O43426 1573 aa31.3■■■□□ 2.6
MMAB-209ENST00000544051 CHMP7Q8WUX9 453 aaPredicted RBP31.26■■■□□ 2.59
MMAB-209ENST00000544051 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
MMAB-209ENST00000544051 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
MMAB-209ENST00000544051 RIMBP3CA6NJZ7 1639 aa31.2■■■□□ 2.58
MMAB-209ENST00000544051 RIMBP3BA6NNM3 1639 aa31.2■■■□□ 2.58
MMAB-209ENST00000544051 RIMBP3Q9UFD9 1639 aa31.2■■■□□ 2.58
MMAB-209ENST00000544051 PBRM1Q86U86 1689 aa31.19■■■□□ 2.58
MMAB-209ENST00000544051 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
MMAB-209ENST00000544051 CLASP1Q7Z460 1538 aa31.05■■■□□ 2.56
MMAB-209ENST00000544051 ERICH3Q5RHP9 1530 aa30.98■■■□□ 2.55
MMAB-209ENST00000544051 ADAMTS12P58397 1594 aa30.96■■■□□ 2.55
MMAB-209ENST00000544051 CYB5RLQ6IPT4 315 aa30.96■■■□□ 2.55
MMAB-209ENST00000544051 FHAD1B1AJZ9 1412 aa30.96■■■□□ 2.55
MMAB-209ENST00000544051 GRIN2AQ12879 1464 aa30.95■■■□□ 2.55
MMAB-209ENST00000544051 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
MMAB-209ENST00000544051 NUP160Q12769 1436 aa30.84■■■□□ 2.53
MMAB-209ENST00000544051 KIF27Q86VH2 1401 aa30.81■■■□□ 2.52
MMAB-209ENST00000544051 CEP170Q5SW79 1584 aa30.78■■■□□ 2.52
MMAB-209ENST00000544051 IGF1RP08069 1367 aa30.73■■■□□ 2.51
MMAB-209ENST00000544051 SHROOM2Q13796 1616 aa30.61■■■□□ 2.49
MMAB-209ENST00000544051 CUL7Q14999 1698 aa30.61■■■□□ 2.49
MMAB-209ENST00000544051 ERCC6L2Q5T890 1561 aa30.57■■■□□ 2.48
MMAB-209ENST00000544051 JPH4Q96JJ6 628 aa30.56■■■□□ 2.48
MMAB-209ENST00000544051 CARMIL1Q5VZK9 1371 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms