RNA–Protein interactions for RNA: ENST00000543835.5

C1R-211, Transcript of complement C1r, humanhuman

TSL 4

Gene C1R, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-211ENST00000543835 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
C1R-211ENST00000543835 ABCC9O60706 1549 aa21.19■□□□□ 0.98
C1R-211ENST00000543835 CCDC180Q9P1Z9 1646 aa21.02■□□□□ 0.96
C1R-211ENST00000543835 RB1CC1Q8TDY2 1594 aa20.09■□□□□ 0.81
C1R-211ENST00000543835 DNAJC5BQ9UF47 199 aa20.04■□□□□ 0.8
C1R-211ENST00000543835 NACADO15069 1562 aa19.95■□□□□ 0.78
C1R-211ENST00000543835 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
C1R-211ENST00000543835 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
C1R-211ENST00000543835 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
C1R-211ENST00000543835 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
C1R-211ENST00000543835 UNC13AQ9UPW8 1703 aa19.52■□□□□ 0.72
C1R-211ENST00000543835 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
C1R-211ENST00000543835 DCAF1Q9Y4B6 1507 aa19.36■□□□□ 0.69
C1R-211ENST00000543835 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
C1R-211ENST00000543835 SCRIBQ14160 1630 aa19.15■□□□□ 0.66
C1R-211ENST00000543835 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
C1R-211ENST00000543835 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
C1R-211ENST00000543835 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
C1R-211ENST00000543835 DNAJC5Q9H3Z4 198 aa18.48■□□□□ 0.55
C1R-211ENST00000543835 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
C1R-211ENST00000543835 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
C1R-211ENST00000543835 CUX2O14529 1486 aa18.33■□□□□ 0.52
C1R-211ENST00000543835 ERCC6Q03468 1493 aa18.29■□□□□ 0.52
C1R-211ENST00000543835 SMARCA2P51531 1590 aa18.28■□□□□ 0.52
C1R-211ENST00000543835 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
C1R-211ENST00000543835 SMARCA4P51532 1647 aa18.27■□□□□ 0.52
C1R-211ENST00000543835 BAZ1AQ9NRL2 1556 aaPredicted RBP18.18■□□□□ 0.5
C1R-211ENST00000543835 NESP48681 1621 aa18.17■□□□□ 0.5
C1R-211ENST00000543835 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
C1R-211ENST00000543835 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
C1R-211ENST00000543835 MROH2BQ7Z745 1585 aa18.05■□□□□ 0.48
C1R-211ENST00000543835 LAMC3Q9Y6N6 1575 aa18■□□□□ 0.47
C1R-211ENST00000543835 THOC2Q8NI27 1593 aaKnown RBP17.99■□□□□ 0.47
C1R-211ENST00000543835 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
C1R-211ENST00000543835 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
C1R-211ENST00000543835 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
C1R-211ENST00000543835 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
C1R-211ENST00000543835 WIZO95785 1651 aa17.77■□□□□ 0.44
C1R-211ENST00000543835 WDR62O43379 1518 aa17.75■□□□□ 0.43
C1R-211ENST00000543835 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
C1R-211ENST00000543835 RSF1Q96T23 1441 aaPredicted RBP17.66■□□□□ 0.42
C1R-211ENST00000543835 CFTRP13569 1480 aa17.66■□□□□ 0.42
C1R-211ENST00000543835 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
C1R-211ENST00000543835 TOP2AP11388 1531 aaKnown RBP17.59■□□□□ 0.41
C1R-211ENST00000543835 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
C1R-211ENST00000543835 URB2Q14146 1524 aaKnown RBP17.53■□□□□ 0.4
C1R-211ENST00000543835 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
C1R-211ENST00000543835 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
C1R-211ENST00000543835 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
C1R-211ENST00000543835 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
C1R-211ENST00000543835 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
C1R-211ENST00000543835 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
C1R-211ENST00000543835 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
C1R-211ENST00000543835 DNMBPQ6XZF7 1577 aa17.22■□□□□ 0.35
C1R-211ENST00000543835 RIMBP3CA6NJZ7 1639 aa17.2■□□□□ 0.34
C1R-211ENST00000543835 RIMBP3BA6NNM3 1639 aa17.2■□□□□ 0.34
C1R-211ENST00000543835 RIMBP3Q9UFD9 1639 aa17.2■□□□□ 0.34
C1R-211ENST00000543835 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
C1R-211ENST00000543835 ARHGEF11O15085 1522 aa17.18■□□□□ 0.34
C1R-211ENST00000543835 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.34
C1R-211ENST00000543835 TARBP1Q13395 1621 aaKnown RBP17.14■□□□□ 0.33
C1R-211ENST00000543835 POLA1P09884 1462 aaPredicted RBP17.14■□□□□ 0.33
C1R-211ENST00000543835 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
C1R-211ENST00000543835 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
C1R-211ENST00000543835 SOGA1O94964 1423 aa17.05■□□□□ 0.32
C1R-211ENST00000543835 FBLN2P98095 1184 aa17.05■□□□□ 0.32
C1R-211ENST00000543835 TDRD9Q8NDG6 1382 aaKnown RBP17.04■□□□□ 0.32
C1R-211ENST00000543835 ARAP1Q96P48 1450 aa17.02■□□□□ 0.32
C1R-211ENST00000543835 CHD1O14646 1710 aa17.01■□□□□ 0.31
C1R-211ENST00000543835 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
C1R-211ENST00000543835 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
C1R-211ENST00000543835 CUX1P39880 1505 aa16.96■□□□□ 0.31
C1R-211ENST00000543835 WDR97A6NE52 1622 aa16.96■□□□□ 0.3
C1R-211ENST00000543835 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
C1R-211ENST00000543835 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
C1R-211ENST00000543835 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
C1R-211ENST00000543835 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
C1R-211ENST00000543835 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
C1R-211ENST00000543835 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
C1R-211ENST00000543835 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
C1R-211ENST00000543835 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
C1R-211ENST00000543835 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
C1R-211ENST00000543835 ABCA5Q8WWZ7 1642 aa16.77■□□□□ 0.27
C1R-211ENST00000543835 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
C1R-211ENST00000543835 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
C1R-211ENST00000543835 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
C1R-211ENST00000543835 GRIN2AQ12879 1464 aa16.7■□□□□ 0.26
C1R-211ENST00000543835 NUP160Q12769 1436 aa16.67■□□□□ 0.26
C1R-211ENST00000543835 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
C1R-211ENST00000543835 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.25
C1R-211ENST00000543835 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
C1R-211ENST00000543835 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
C1R-211ENST00000543835 CEP170Q5SW79 1584 aa16.63■□□□□ 0.25
C1R-211ENST00000543835 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
C1R-211ENST00000543835 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
C1R-211ENST00000543835 SHROOM2Q13796 1616 aa16.56■□□□□ 0.24
C1R-211ENST00000543835 PRG4Q92954 1404 aaPredicted RBP16.5■□□□□ 0.23
C1R-211ENST00000543835 JPH4Q96JJ6 628 aa16.48■□□□□ 0.23
C1R-211ENST00000543835 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
C1R-211ENST00000543835 RUSC2Q8N2Y8 1516 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms