RNA–Protein interactions for RNA: ENST00000543821.5

HMBS-218, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 4

Gene HMBS, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-218ENST00000543821 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
HMBS-218ENST00000543821 CCDC180Q9P1Z9 1646 aa28.04■■■□□ 2.08
HMBS-218ENST00000543821 ABCC9O60706 1549 aa27.57■■■□□ 2
HMBS-218ENST00000543821 RB1CC1Q8TDY2 1594 aa26.47■■□□□ 1.83
HMBS-218ENST00000543821 NACADO15069 1562 aa26.43■■□□□ 1.82
HMBS-218ENST00000543821 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
HMBS-218ENST00000543821 DCAF8L2P0C7V8 631 aa26.16■■□□□ 1.78
HMBS-218ENST00000543821 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
HMBS-218ENST00000543821 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
HMBS-218ENST00000543821 UNC13AQ9UPW8 1703 aa25.88■■□□□ 1.73
HMBS-218ENST00000543821 BICRAQ9NZM4 1560 aa25.76■■□□□ 1.71
HMBS-218ENST00000543821 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
HMBS-218ENST00000543821 DNAJC5BQ9UF47 199 aa25.63■■□□□ 1.69
HMBS-218ENST00000543821 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
HMBS-218ENST00000543821 SCRIBQ14160 1630 aa25.46■■□□□ 1.67
HMBS-218ENST00000543821 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
HMBS-218ENST00000543821 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
HMBS-218ENST00000543821 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
HMBS-218ENST00000543821 NCAPD3P42695 1498 aa24.44■■□□□ 1.5
HMBS-218ENST00000543821 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
HMBS-218ENST00000543821 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
HMBS-218ENST00000543821 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
HMBS-218ENST00000543821 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
HMBS-218ENST00000543821 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
HMBS-218ENST00000543821 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
HMBS-218ENST00000543821 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.47
HMBS-218ENST00000543821 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
HMBS-218ENST00000543821 WIZO95785 1651 aa23.89■■□□□ 1.42
HMBS-218ENST00000543821 RSF1Q96T23 1441 aaPredicted RBP23.88■■□□□ 1.41
HMBS-218ENST00000543821 NESP48681 1621 aa23.82■■□□□ 1.4
HMBS-218ENST00000543821 LAMC3Q9Y6N6 1575 aa23.77■■□□□ 1.4
HMBS-218ENST00000543821 ERCC6Q03468 1493 aa23.74■■□□□ 1.39
HMBS-218ENST00000543821 CUX2O14529 1486 aa23.68■■□□□ 1.38
HMBS-218ENST00000543821 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
HMBS-218ENST00000543821 TOP2AP11388 1531 aaKnown RBP23.65■■□□□ 1.38
HMBS-218ENST00000543821 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
HMBS-218ENST00000543821 THOC2Q8NI27 1593 aaKnown RBP23.54■■□□□ 1.36
HMBS-218ENST00000543821 KIF21AQ7Z4S6 1674 aa23.51■■□□□ 1.35
HMBS-218ENST00000543821 CFTRP13569 1480 aa23.5■■□□□ 1.35
HMBS-218ENST00000543821 CCDC88BA6NC98 1476 aa23.39■■□□□ 1.34
HMBS-218ENST00000543821 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
HMBS-218ENST00000543821 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
HMBS-218ENST00000543821 WDR62O43379 1518 aa23.33■■□□□ 1.32
HMBS-218ENST00000543821 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
HMBS-218ENST00000543821 DNAJC5Q9H3Z4 198 aa23.26■■□□□ 1.31
HMBS-218ENST00000543821 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
HMBS-218ENST00000543821 URB2Q14146 1524 aaKnown RBP23.17■■□□□ 1.3
HMBS-218ENST00000543821 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
HMBS-218ENST00000543821 TOPBP1Q92547 1522 aa22.97■■□□□ 1.27
HMBS-218ENST00000543821 SUPT5HO00267 1087 aaKnown RBP22.92■■□□□ 1.26
HMBS-218ENST00000543821 DNMBPQ6XZF7 1577 aa22.91■■□□□ 1.26
HMBS-218ENST00000543821 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
HMBS-218ENST00000543821 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
HMBS-218ENST00000543821 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
HMBS-218ENST00000543821 POLA1P09884 1462 aaPredicted RBP22.77■■□□□ 1.24
HMBS-218ENST00000543821 CUX1P39880 1505 aa22.72■■□□□ 1.23
HMBS-218ENST00000543821 EIF4G3O43432 1585 aaKnown RBP22.66■■□□□ 1.22
HMBS-218ENST00000543821 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
HMBS-218ENST00000543821 SOGA1O94964 1423 aa22.65■■□□□ 1.22
HMBS-218ENST00000543821 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
HMBS-218ENST00000543821 RAD54L2Q9Y4B4 1467 aa22.64■■□□□ 1.21
HMBS-218ENST00000543821 AQRO60306 1485 aaKnown RBP eCLIP22.62■■□□□ 1.212e-8■■■■■ 32.5
HMBS-218ENST00000543821 WDR97A6NE52 1622 aa22.59■■□□□ 1.21
HMBS-218ENST00000543821 TDRD9Q8NDG6 1382 aaKnown RBP22.53■■□□□ 1.2
HMBS-218ENST00000543821 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
HMBS-218ENST00000543821 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
HMBS-218ENST00000543821 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
HMBS-218ENST00000543821 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
HMBS-218ENST00000543821 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
HMBS-218ENST00000543821 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
HMBS-218ENST00000543821 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
HMBS-218ENST00000543821 CHD1O14646 1710 aa22.4■■□□□ 1.18
HMBS-218ENST00000543821 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
HMBS-218ENST00000543821 SNAPC4Q5SXM2 1469 aa22.39■■□□□ 1.17
HMBS-218ENST00000543821 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.17
HMBS-218ENST00000543821 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
HMBS-218ENST00000543821 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
HMBS-218ENST00000543821 RIMBP3CA6NJZ7 1639 aa22.28■■□□□ 1.16
HMBS-218ENST00000543821 RIMBP3BA6NNM3 1639 aa22.28■■□□□ 1.16
HMBS-218ENST00000543821 RIMBP3Q9UFD9 1639 aa22.28■■□□□ 1.16
HMBS-218ENST00000543821 FBLN2P98095 1184 aa22.28■■□□□ 1.16
HMBS-218ENST00000543821 ARHGEF11O15085 1522 aa22.26■■□□□ 1.15
HMBS-218ENST00000543821 CHMP7Q8WUX9 453 aaPredicted RBP22.26■■□□□ 1.15
HMBS-218ENST00000543821 CLASP1Q7Z460 1538 aa22.24■■□□□ 1.15
HMBS-218ENST00000543821 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
HMBS-218ENST00000543821 ERICH3Q5RHP9 1530 aa22.19■■□□□ 1.14
HMBS-218ENST00000543821 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
HMBS-218ENST00000543821 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.13
HMBS-218ENST00000543821 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
HMBS-218ENST00000543821 NUP160Q12769 1436 aa22.09■■□□□ 1.13
HMBS-218ENST00000543821 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
HMBS-218ENST00000543821 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
HMBS-218ENST00000543821 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
HMBS-218ENST00000543821 IGF1RP08069 1367 aa22.01■■□□□ 1.11
HMBS-218ENST00000543821 KIF27Q86VH2 1401 aa22.01■■□□□ 1.11
HMBS-218ENST00000543821 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
HMBS-218ENST00000543821 CUL7Q14999 1698 aa21.89■■□□□ 1.1
HMBS-218ENST00000543821 ERCC6L2Q5T890 1561 aa21.87■■□□□ 1.09
HMBS-218ENST00000543821 RUSC2Q8N2Y8 1516 aa21.84■■□□□ 1.09
HMBS-218ENST00000543821 CARMIL1Q5VZK9 1371 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms