RNA–Protein interactions for RNA: ENST00000543722.1

SLC6A13-211, Transcript of solute carrier family 6 member 13, humanhuman

TSL 3

Gene SLC6A13, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13-211ENST00000543722 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
SLC6A13-211ENST00000543722 ABCC9O60706 1549 aa29.91■■■□□ 2.38
SLC6A13-211ENST00000543722 CCDC180Q9P1Z9 1646 aa29.77■■■□□ 2.36
SLC6A13-211ENST00000543722 RB1CC1Q8TDY2 1594 aa28.39■■■□□ 2.14
SLC6A13-211ENST00000543722 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
SLC6A13-211ENST00000543722 NACADO15069 1562 aa28.2■■■□□ 2.11
SLC6A13-211ENST00000543722 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
SLC6A13-211ENST00000543722 PABPN1Q86U42 306 aaKnown RBP eCLIP27.93■■■□□ 2.06
SLC6A13-211ENST00000543722 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
SLC6A13-211ENST00000543722 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.02
SLC6A13-211ENST00000543722 ZCCHC6Q5VYS8 1495 aaKnown RBP27.61■■■□□ 2.01
SLC6A13-211ENST00000543722 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
SLC6A13-211ENST00000543722 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
SLC6A13-211ENST00000543722 SCRIBQ14160 1630 aa27.26■■□□□ 1.95
SLC6A13-211ENST00000543722 SHROOM4Q9ULL8 1493 aa27.11■■□□□ 1.93
SLC6A13-211ENST00000543722 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
SLC6A13-211ENST00000543722 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
SLC6A13-211ENST00000543722 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
SLC6A13-211ENST00000543722 NCAPD3P42695 1498 aa26.07■■□□□ 1.76
SLC6A13-211ENST00000543722 ATAD2BQ9ULI0 1458 aa26.02■■□□□ 1.76
SLC6A13-211ENST00000543722 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
SLC6A13-211ENST00000543722 SMARCA2P51531 1590 aa25.9■■□□□ 1.74
SLC6A13-211ENST00000543722 BAZ1AQ9NRL2 1556 aaPredicted RBP25.85■■□□□ 1.73
SLC6A13-211ENST00000543722 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
SLC6A13-211ENST00000543722 HMGXB3Q12766 1538 aa25.82■■□□□ 1.72
SLC6A13-211ENST00000543722 BAZ1BQ9UIG0 1483 aaKnown RBP25.78■■□□□ 1.72
SLC6A13-211ENST00000543722 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
SLC6A13-211ENST00000543722 NESP48681 1621 aa25.68■■□□□ 1.7
SLC6A13-211ENST00000543722 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
SLC6A13-211ENST00000543722 CUX2O14529 1486 aa25.65■■□□□ 1.7
SLC6A13-211ENST00000543722 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
SLC6A13-211ENST00000543722 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
SLC6A13-211ENST00000543722 WIZO95785 1651 aa25.38■■□□□ 1.65
SLC6A13-211ENST00000543722 PDS5BQ9NTI5 1447 aa25.36■■□□□ 1.65
SLC6A13-211ENST00000543722 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
SLC6A13-211ENST00000543722 THOC2Q8NI27 1593 aaKnown RBP25.3■■□□□ 1.64
SLC6A13-211ENST00000543722 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
SLC6A13-211ENST00000543722 RSF1Q96T23 1441 aaPredicted RBP25.21■■□□□ 1.63
SLC6A13-211ENST00000543722 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
SLC6A13-211ENST00000543722 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
SLC6A13-211ENST00000543722 CEP164Q9UPV0 1460 aa25.03■■□□□ 1.6
SLC6A13-211ENST00000543722 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
SLC6A13-211ENST00000543722 CFTRP13569 1480 aa25■■□□□ 1.59
SLC6A13-211ENST00000543722 WDR62O43379 1518 aa25■■□□□ 1.59
SLC6A13-211ENST00000543722 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.56
SLC6A13-211ENST00000543722 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
SLC6A13-211ENST00000543722 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
SLC6A13-211ENST00000543722 OSCARQ8IYS5 282 aa24.62■■□□□ 1.53
SLC6A13-211ENST00000543722 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
SLC6A13-211ENST00000543722 TOPBP1Q92547 1522 aa24.55■■□□□ 1.52
SLC6A13-211ENST00000543722 IFT140Q96RY7 1462 aa24.52■■□□□ 1.52
SLC6A13-211ENST00000543722 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
SLC6A13-211ENST00000543722 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
SLC6A13-211ENST00000543722 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
SLC6A13-211ENST00000543722 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.49
SLC6A13-211ENST00000543722 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.49
SLC6A13-211ENST00000543722 EIF4G3O43432 1585 aaKnown RBP24.3■■□□□ 1.48
SLC6A13-211ENST00000543722 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
SLC6A13-211ENST00000543722 FBLN2P98095 1184 aa24.27■■□□□ 1.48
SLC6A13-211ENST00000543722 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
SLC6A13-211ENST00000543722 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
SLC6A13-211ENST00000543722 SOGA1O94964 1423 aa24.25■■□□□ 1.47
SLC6A13-211ENST00000543722 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
SLC6A13-211ENST00000543722 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
SLC6A13-211ENST00000543722 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
SLC6A13-211ENST00000543722 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
SLC6A13-211ENST00000543722 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
SLC6A13-211ENST00000543722 CUX1P39880 1505 aa24.14■■□□□ 1.45
SLC6A13-211ENST00000543722 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
SLC6A13-211ENST00000543722 CYB5RLQ6IPT4 315 aa24.09■■□□□ 1.45
SLC6A13-211ENST00000543722 CHD1O14646 1710 aa24.09■■□□□ 1.45
SLC6A13-211ENST00000543722 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
SLC6A13-211ENST00000543722 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
SLC6A13-211ENST00000543722 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
SLC6A13-211ENST00000543722 WDR97A6NE52 1622 aa23.96■■□□□ 1.43
SLC6A13-211ENST00000543722 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
SLC6A13-211ENST00000543722 GAPVD1Q14C86 1478 aa23.92■■□□□ 1.42
SLC6A13-211ENST00000543722 ARAP1Q96P48 1450 aa23.89■■□□□ 1.42
SLC6A13-211ENST00000543722 SYNJ2O15056 1496 aa23.88■■□□□ 1.41
SLC6A13-211ENST00000543722 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
SLC6A13-211ENST00000543722 SYNJ1O43426 1573 aa23.85■■□□□ 1.41
SLC6A13-211ENST00000543722 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
SLC6A13-211ENST00000543722 TRHP20396 242 aaPredicted RBP23.83■■□□□ 1.41
SLC6A13-211ENST00000543722 CLASP1Q7Z460 1538 aa23.83■■□□□ 1.41
SLC6A13-211ENST00000543722 PBRM1Q86U86 1689 aa23.8■■□□□ 1.4
SLC6A13-211ENST00000543722 ABCA5Q8WWZ7 1642 aa23.77■■□□□ 1.4
SLC6A13-211ENST00000543722 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
SLC6A13-211ENST00000543722 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
SLC6A13-211ENST00000543722 GRIN2AQ12879 1464 aa23.66■■□□□ 1.38
SLC6A13-211ENST00000543722 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
SLC6A13-211ENST00000543722 FHAD1B1AJZ9 1412 aa23.61■■□□□ 1.37
SLC6A13-211ENST00000543722 NUP160Q12769 1436 aa23.57■■□□□ 1.36
SLC6A13-211ENST00000543722 CEP170Q5SW79 1584 aa23.55■■□□□ 1.36
SLC6A13-211ENST00000543722 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
SLC6A13-211ENST00000543722 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
SLC6A13-211ENST00000543722 JPH4Q96JJ6 628 aa23.44■■□□□ 1.34
SLC6A13-211ENST00000543722 PRG4Q92954 1404 aaPredicted RBP23.41■■□□□ 1.34
SLC6A13-211ENST00000543722 SHROOM2Q13796 1616 aa23.38■■□□□ 1.33
SLC6A13-211ENST00000543722 KIF27Q86VH2 1401 aa23.36■■□□□ 1.33
SLC6A13-211ENST00000543722 IGF1RP08069 1367 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms