RNA–Protein interactions for RNA: ENST00000543699.5

PSMD9-209, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 5

Gene PSMD9, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-209ENST00000543699 NISCHQ9Y2I1 1504 aa40.16■■■■■ 4.02
PSMD9-209ENST00000543699 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.36
PSMD9-209ENST00000543699 ABCC9O60706 1549 aa35.54■■■■□ 3.28
PSMD9-209ENST00000543699 RB1CC1Q8TDY2 1594 aa34.06■■■■□ 3.04
PSMD9-209ENST00000543699 NACADO15069 1562 aa33.93■■■■□ 3.02
PSMD9-209ENST00000543699 MYO15BQ96JP2 1530 aa33.62■■■□□ 2.97
PSMD9-209ENST00000543699 DCAF8L2P0C7V8 631 aa33.5■■■□□ 2.95
PSMD9-209ENST00000543699 UNC13AQ9UPW8 1703 aa33.4■■■□□ 2.94
PSMD9-209ENST00000543699 ZCCHC6Q5VYS8 1495 aaKnown RBP33.37■■■□□ 2.93
PSMD9-209ENST00000543699 DCAF1Q9Y4B6 1507 aa33.28■■■□□ 2.92
PSMD9-209ENST00000543699 BICRAQ9NZM4 1560 aa33.11■■■□□ 2.89
PSMD9-209ENST00000543699 DNAJC5BQ9UF47 199 aa33.1■■■□□ 2.89
PSMD9-209ENST00000543699 PABPN1Q86U42 306 aaKnown RBP eCLIP33.07■■■□□ 2.88
PSMD9-209ENST00000543699 SHROOM4Q9ULL8 1493 aa32.73■■■□□ 2.83
PSMD9-209ENST00000543699 SCRIBQ14160 1630 aa32.7■■■□□ 2.83
PSMD9-209ENST00000543699 EIF4G1Q04637 1599 aaKnown RBP32.23■■■□□ 2.75
PSMD9-209ENST00000543699 CC2D2AQ9P2K1 1620 aa32.22■■■□□ 2.75
PSMD9-209ENST00000543699 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
PSMD9-209ENST00000543699 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
PSMD9-209ENST00000543699 SMARCA4P51532 1647 aa31.3■■■□□ 2.6
PSMD9-209ENST00000543699 ATAD2BQ9ULI0 1458 aa31.22■■■□□ 2.59
PSMD9-209ENST00000543699 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
PSMD9-209ENST00000543699 BAZ1AQ9NRL2 1556 aaPredicted RBP31.16■■■□□ 2.58
PSMD9-209ENST00000543699 HMGXB3Q12766 1538 aa31.13■■■□□ 2.57
PSMD9-209ENST00000543699 PEG3Q9GZU2 1588 aa31.05■■■□□ 2.56
PSMD9-209ENST00000543699 MROH2BQ7Z745 1585 aa30.93■■■□□ 2.54
PSMD9-209ENST00000543699 BAZ1BQ9UIG0 1483 aaKnown RBP30.89■■■□□ 2.54
PSMD9-209ENST00000543699 NESP48681 1621 aa30.65■■■□□ 2.5
PSMD9-209ENST00000543699 ERCC6Q03468 1493 aa30.64■■■□□ 2.5
PSMD9-209ENST00000543699 CUX2O14529 1486 aa30.61■■■□□ 2.49
PSMD9-209ENST00000543699 WIZO95785 1651 aa30.58■■■□□ 2.49
PSMD9-209ENST00000543699 LAMC3Q9Y6N6 1575 aa30.56■■■□□ 2.48
PSMD9-209ENST00000543699 THOC2Q8NI27 1593 aaKnown RBP30.39■■■□□ 2.46
PSMD9-209ENST00000543699 RSF1Q96T23 1441 aaPredicted RBP30.38■■■□□ 2.45
PSMD9-209ENST00000543699 KIF21AQ7Z4S6 1674 aa30.35■■■□□ 2.45
PSMD9-209ENST00000543699 CADPSQ9ULU8 1353 aa30.3■■■□□ 2.44
PSMD9-209ENST00000543699 PDS5BQ9NTI5 1447 aa30.3■■■□□ 2.44
PSMD9-209ENST00000543699 TOP2AP11388 1531 aaKnown RBP30.23■■■□□ 2.43
PSMD9-209ENST00000543699 DNAJC5Q9H3Z4 198 aa30.2■■■□□ 2.43
PSMD9-209ENST00000543699 CFTRP13569 1480 aa30.06■■■□□ 2.4
PSMD9-209ENST00000543699 MRC2Q9UBG0 1479 aa30.04■■■□□ 2.4
PSMD9-209ENST00000543699 WDR62O43379 1518 aa30.01■■■□□ 2.4
PSMD9-209ENST00000543699 FANCD2Q9BXW9 1451 aa29.96■■■□□ 2.39
PSMD9-209ENST00000543699 CEP164Q9UPV0 1460 aa29.96■■■□□ 2.39
PSMD9-209ENST00000543699 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
PSMD9-209ENST00000543699 CCDC88BA6NC98 1476 aa29.85■■■□□ 2.37
PSMD9-209ENST00000543699 URB2Q14146 1524 aaKnown RBP29.73■■■□□ 2.35
PSMD9-209ENST00000543699 TOPBP1Q92547 1522 aa29.45■■■□□ 2.3
PSMD9-209ENST00000543699 ABCC8Q09428 1581 aa29.41■■■□□ 2.3
PSMD9-209ENST00000543699 DNMBPQ6XZF7 1577 aa29.39■■■□□ 2.29
PSMD9-209ENST00000543699 IFT140Q96RY7 1462 aa29.37■■■□□ 2.29
PSMD9-209ENST00000543699 ZNF608Q9ULD9 1512 aaPredicted RBP29.29■■■□□ 2.28
PSMD9-209ENST00000543699 TARBP1Q13395 1621 aaKnown RBP29.23■■■□□ 2.27
PSMD9-209ENST00000543699 EIF4G3O43432 1585 aaKnown RBP29.18■■■□□ 2.26
PSMD9-209ENST00000543699 POLA1P09884 1462 aaPredicted RBP29.17■■■□□ 2.26
PSMD9-209ENST00000543699 OSCARQ8IYS5 282 aa29.15■■■□□ 2.26
PSMD9-209ENST00000543699 CUX1P39880 1505 aa29.05■■■□□ 2.24
PSMD9-209ENST00000543699 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
PSMD9-209ENST00000543699 AQRO60306 1485 aaKnown RBP eCLIP29.02■■■□□ 2.241e-6■■■■□ 24.3
PSMD9-209ENST00000543699 FGD5Q6ZNL6 1462 aa29■■■□□ 2.23
PSMD9-209ENST00000543699 RAD54L2Q9Y4B4 1467 aa29■■■□□ 2.23
PSMD9-209ENST00000543699 WDR97A6NE52 1622 aa28.98■■■□□ 2.23
PSMD9-209ENST00000543699 SOGA1O94964 1423 aa28.97■■■□□ 2.23
PSMD9-209ENST00000543699 CHD1O14646 1710 aa28.94■■■□□ 2.22
PSMD9-209ENST00000543699 TDRD9Q8NDG6 1382 aaKnown RBP28.86■■■□□ 2.21
PSMD9-209ENST00000543699 RIMBP3CA6NJZ7 1639 aa28.85■■■□□ 2.21
PSMD9-209ENST00000543699 RIMBP3BA6NNM3 1639 aa28.85■■■□□ 2.21
PSMD9-209ENST00000543699 RIMBP3Q9UFD9 1639 aa28.85■■■□□ 2.21
PSMD9-209ENST00000543699 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
PSMD9-209ENST00000543699 ARHGEF11O15085 1522 aa28.77■■■□□ 2.2
PSMD9-209ENST00000543699 SNAPC4Q5SXM2 1469 aa28.75■■■□□ 2.19
PSMD9-209ENST00000543699 MAGI1Q96QZ7 1491 aaPredicted RBP28.74■■■□□ 2.19
PSMD9-209ENST00000543699 ABCA10Q8WWZ4 1543 aa28.74■■■□□ 2.19
PSMD9-209ENST00000543699 GRIN2BQ13224 1484 aa28.73■■■□□ 2.19
PSMD9-209ENST00000543699 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
PSMD9-209ENST00000543699 PBRM1Q86U86 1689 aa28.72■■■□□ 2.19
PSMD9-209ENST00000543699 ABCA5Q8WWZ7 1642 aa28.71■■■□□ 2.19
PSMD9-209ENST00000543699 TOP2BQ02880 1626 aa28.7■■■□□ 2.19
PSMD9-209ENST00000543699 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
PSMD9-209ENST00000543699 SYNJ1O43426 1573 aa28.65■■■□□ 2.18
PSMD9-209ENST00000543699 FBLN2P98095 1184 aa28.64■■■□□ 2.18
PSMD9-209ENST00000543699 WRNQ14191 1432 aaPredicted RBP eCLIP28.62■■■□□ 2.17
PSMD9-209ENST00000543699 SYNJ2O15056 1496 aa28.62■■■□□ 2.17
PSMD9-209ENST00000543699 CLASP1Q7Z460 1538 aa28.62■■■□□ 2.17
PSMD9-209ENST00000543699 CHMP7Q8WUX9 453 aaPredicted RBP28.53■■■□□ 2.16
PSMD9-209ENST00000543699 ARAP1Q96P48 1450 aa28.5■■■□□ 2.15
PSMD9-209ENST00000543699 ADAMTS12P58397 1594 aa28.44■■■□□ 2.14
PSMD9-209ENST00000543699 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
PSMD9-209ENST00000543699 ERICH3Q5RHP9 1530 aa28.39■■■□□ 2.14
PSMD9-209ENST00000543699 GRIN2AQ12879 1464 aa28.38■■■□□ 2.13
PSMD9-209ENST00000543699 FHAD1B1AJZ9 1412 aa28.31■■■□□ 2.12
PSMD9-209ENST00000543699 NUP160Q12769 1436 aa28.31■■■□□ 2.12
PSMD9-209ENST00000543699 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
PSMD9-209ENST00000543699 SHROOM2Q13796 1616 aa28.21■■■□□ 2.11
PSMD9-209ENST00000543699 ERCC6L2Q5T890 1561 aa28.14■■■□□ 2.1
PSMD9-209ENST00000543699 KIF27Q86VH2 1401 aa28.05■■■□□ 2.08
PSMD9-209ENST00000543699 CUL7Q14999 1698 aa28.04■■■□□ 2.08
PSMD9-209ENST00000543699 RUSC2Q8N2Y8 1516 aa28.04■■■□□ 2.08
PSMD9-209ENST00000543699 IGF1RP08069 1367 aa28.03■■■□□ 2.08
PSMD9-209ENST00000543699 TRHP20396 242 aaPredicted RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms