RNA–Protein interactions for RNA: ENST00000543559.1

CACNA1C-AS3-201, CACNA1C antisense RNA 3, humanhuman

TSL 5 BASIC

Gene CACNA1C-AS3, Length 444 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-AS3-201ENST00000543559 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
CACNA1C-AS3-201ENST00000543559 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
CACNA1C-AS3-201ENST00000543559 ABCC9O60706 1549 aa19.75■□□□□ 0.75
CACNA1C-AS3-201ENST00000543559 RB1CC1Q8TDY2 1594 aa18.88■□□□□ 0.61
CACNA1C-AS3-201ENST00000543559 NACADO15069 1562 aa18.81■□□□□ 0.6
CACNA1C-AS3-201ENST00000543559 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
CACNA1C-AS3-201ENST00000543559 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
CACNA1C-AS3-201ENST00000543559 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
CACNA1C-AS3-201ENST00000543559 DCAF1Q9Y4B6 1507 aa18.48■□□□□ 0.55
CACNA1C-AS3-201ENST00000543559 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
CACNA1C-AS3-201ENST00000543559 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
CACNA1C-AS3-201ENST00000543559 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
CACNA1C-AS3-201ENST00000543559 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
CACNA1C-AS3-201ENST00000543559 SHROOM4Q9ULL8 1493 aa18.17■□□□□ 0.5
CACNA1C-AS3-201ENST00000543559 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
CACNA1C-AS3-201ENST00000543559 EIF4G1Q04637 1599 aaKnown RBP17.88■□□□□ 0.45
CACNA1C-AS3-201ENST00000543559 CC2D2AQ9P2K1 1620 aa17.86■□□□□ 0.45
CACNA1C-AS3-201ENST00000543559 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
CACNA1C-AS3-201ENST00000543559 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
CACNA1C-AS3-201ENST00000543559 ATAD2BQ9ULI0 1458 aa17.35■□□□□ 0.37
CACNA1C-AS3-201ENST00000543559 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
CACNA1C-AS3-201ENST00000543559 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
CACNA1C-AS3-201ENST00000543559 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
CACNA1C-AS3-201ENST00000543559 HMGXB3Q12766 1538 aa17.27■□□□□ 0.36
CACNA1C-AS3-201ENST00000543559 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
CACNA1C-AS3-201ENST00000543559 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
CACNA1C-AS3-201ENST00000543559 BAZ1BQ9UIG0 1483 aaKnown RBP17.15■□□□□ 0.34
CACNA1C-AS3-201ENST00000543559 NESP48681 1621 aa17.03■□□□□ 0.32
CACNA1C-AS3-201ENST00000543559 ERCC6Q03468 1493 aa17.01■□□□□ 0.31
CACNA1C-AS3-201ENST00000543559 CUX2O14529 1486 aa16.99■□□□□ 0.31
CACNA1C-AS3-201ENST00000543559 WIZO95785 1651 aa16.95■□□□□ 0.3
CACNA1C-AS3-201ENST00000543559 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
CACNA1C-AS3-201ENST00000543559 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
CACNA1C-AS3-201ENST00000543559 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
CACNA1C-AS3-201ENST00000543559 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
CACNA1C-AS3-201ENST00000543559 PDS5BQ9NTI5 1447 aa16.83■□□□□ 0.28
CACNA1C-AS3-201ENST00000543559 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
CACNA1C-AS3-201ENST00000543559 TOP2AP11388 1531 aaKnown RBP16.78■□□□□ 0.28
CACNA1C-AS3-201ENST00000543559 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
CACNA1C-AS3-201ENST00000543559 CFTRP13569 1480 aa16.71■□□□□ 0.27
CACNA1C-AS3-201ENST00000543559 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
CACNA1C-AS3-201ENST00000543559 WDR62O43379 1518 aa16.66■□□□□ 0.26
CACNA1C-AS3-201ENST00000543559 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
CACNA1C-AS3-201ENST00000543559 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
CACNA1C-AS3-201ENST00000543559 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
CACNA1C-AS3-201ENST00000543559 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.24
CACNA1C-AS3-201ENST00000543559 PRDM2Q13029 1718 aa16.48■□□□□ 0.23
CACNA1C-AS3-201ENST00000543559 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
CACNA1C-AS3-201ENST00000543559 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
CACNA1C-AS3-201ENST00000543559 ABCC8Q09428 1581 aa16.31■□□□□ 0.2
CACNA1C-AS3-201ENST00000543559 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
CACNA1C-AS3-201ENST00000543559 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
CACNA1C-AS3-201ENST00000543559 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
CACNA1C-AS3-201ENST00000543559 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.19
CACNA1C-AS3-201ENST00000543559 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
CACNA1C-AS3-201ENST00000543559 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
CACNA1C-AS3-201ENST00000543559 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
CACNA1C-AS3-201ENST00000543559 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
CACNA1C-AS3-201ENST00000543559 CUX1P39880 1505 aa16.14■□□□□ 0.17
CACNA1C-AS3-201ENST00000543559 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
CACNA1C-AS3-201ENST00000543559 FGD5Q6ZNL6 1462 aa16.11■□□□□ 0.17
CACNA1C-AS3-201ENST00000543559 SOGA1O94964 1423 aa16.11■□□□□ 0.17
CACNA1C-AS3-201ENST00000543559 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
CACNA1C-AS3-201ENST00000543559 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
CACNA1C-AS3-201ENST00000543559 TRIM41Q8WV44 630 aa16.03■□□□□ 0.16
CACNA1C-AS3-201ENST00000543559 CHD1O14646 1710 aa15.99■□□□□ 0.15
CACNA1C-AS3-201ENST00000543559 RIMBP3CA6NJZ7 1639 aa15.98■□□□□ 0.15
CACNA1C-AS3-201ENST00000543559 RIMBP3BA6NNM3 1639 aa15.98■□□□□ 0.15
CACNA1C-AS3-201ENST00000543559 RIMBP3Q9UFD9 1639 aa15.98■□□□□ 0.15
CACNA1C-AS3-201ENST00000543559 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
CACNA1C-AS3-201ENST00000543559 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
CACNA1C-AS3-201ENST00000543559 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
CACNA1C-AS3-201ENST00000543559 GRIN2BQ13224 1484 aa15.96■□□□□ 0.14
CACNA1C-AS3-201ENST00000543559 MAGI1Q96QZ7 1491 aaPredicted RBP15.96■□□□□ 0.14
CACNA1C-AS3-201ENST00000543559 FBLN2P98095 1184 aa15.92■□□□□ 0.14
CACNA1C-AS3-201ENST00000543559 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
CACNA1C-AS3-201ENST00000543559 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
CACNA1C-AS3-201ENST00000543559 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
CACNA1C-AS3-201ENST00000543559 TOP2BQ02880 1626 aa15.91■□□□□ 0.14
CACNA1C-AS3-201ENST00000543559 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
CACNA1C-AS3-201ENST00000543559 SYNJ1O43426 1573 aa15.9■□□□□ 0.14
CACNA1C-AS3-201ENST00000543559 SYNJ2O15056 1496 aa15.9■□□□□ 0.14
CACNA1C-AS3-201ENST00000543559 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
CACNA1C-AS3-201ENST00000543559 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
CACNA1C-AS3-201ENST00000543559 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
CACNA1C-AS3-201ENST00000543559 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
CACNA1C-AS3-201ENST00000543559 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
CACNA1C-AS3-201ENST00000543559 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
CACNA1C-AS3-201ENST00000543559 GRIN2AQ12879 1464 aa15.77■□□□□ 0.11
CACNA1C-AS3-201ENST00000543559 ERICH3Q5RHP9 1530 aa15.75■□□□□ 0.11
CACNA1C-AS3-201ENST00000543559 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
CACNA1C-AS3-201ENST00000543559 NUP160Q12769 1436 aa15.74■□□□□ 0.11
CACNA1C-AS3-201ENST00000543559 CEP170Q5SW79 1584 aa15.7■□□□□ 0.1
CACNA1C-AS3-201ENST00000543559 SHROOM2Q13796 1616 aa15.64■□□□□ 0.09
CACNA1C-AS3-201ENST00000543559 ERCC6L2Q5T890 1561 aa15.63■□□□□ 0.09
CACNA1C-AS3-201ENST00000543559 IGF1RP08069 1367 aa15.6■□□□□ 0.09
CACNA1C-AS3-201ENST00000543559 KIF27Q86VH2 1401 aa15.59■□□□□ 0.09
CACNA1C-AS3-201ENST00000543559 RUSC2Q8N2Y8 1516 aa15.56■□□□□ 0.08
CACNA1C-AS3-201ENST00000543559 CUL7Q14999 1698 aa15.53■□□□□ 0.08
CACNA1C-AS3-201ENST00000543559 PRG4Q92954 1404 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms