RNA–Protein interactions for RNA: ENST00000543508.1

TPRX1-203, Transcript of tetrapeptide repeat homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene TPRX1, Length 1,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1-203ENST00000543508 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
TPRX1-203ENST00000543508 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
TPRX1-203ENST00000543508 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
TPRX1-203ENST00000543508 DCAF1Q9Y4B6 1507 aa23.37■■□□□ 1.33
TPRX1-203ENST00000543508 SHROOM4Q9ULL8 1493 aa23.03■■□□□ 1.28
TPRX1-203ENST00000543508 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
TPRX1-203ENST00000543508 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
TPRX1-203ENST00000543508 NACADO15069 1562 aa22.63■■□□□ 1.21
TPRX1-203ENST00000543508 ABCC9O60706 1549 aa22.56■■□□□ 1.2
TPRX1-203ENST00000543508 SCRIBQ14160 1630 aa22.4■■□□□ 1.18
TPRX1-203ENST00000543508 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
TPRX1-203ENST00000543508 RB1CC1Q8TDY2 1594 aa22.32■■□□□ 1.16
TPRX1-203ENST00000543508 RSF1Q96T23 1441 aaPredicted RBP21.96■■□□□ 1.11
TPRX1-203ENST00000543508 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
TPRX1-203ENST00000543508 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
TPRX1-203ENST00000543508 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
TPRX1-203ENST00000543508 MROH2BQ7Z745 1585 aa21.72■■□□□ 1.07
TPRX1-203ENST00000543508 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
TPRX1-203ENST00000543508 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.05
TPRX1-203ENST00000543508 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
TPRX1-203ENST00000543508 WIZO95785 1651 aa21.56■■□□□ 1.04
TPRX1-203ENST00000543508 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
TPRX1-203ENST00000543508 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
TPRX1-203ENST00000543508 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 1
TPRX1-203ENST00000543508 EIF4G1Q04637 1599 aaKnown RBP21.27■■□□□ 1
TPRX1-203ENST00000543508 SMARCA2P51531 1590 aa21.2■□□□□ 0.99
TPRX1-203ENST00000543508 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
TPRX1-203ENST00000543508 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.97
TPRX1-203ENST00000543508 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
TPRX1-203ENST00000543508 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
TPRX1-203ENST00000543508 HMGXB3Q12766 1538 aa20.92■□□□□ 0.94
TPRX1-203ENST00000543508 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
TPRX1-203ENST00000543508 ABCC8Q09428 1581 aa20.79■□□□□ 0.92
TPRX1-203ENST00000543508 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
TPRX1-203ENST00000543508 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
TPRX1-203ENST00000543508 EEA1Q15075 1411 aa20.64■□□□□ 0.89
TPRX1-203ENST00000543508 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
TPRX1-203ENST00000543508 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
TPRX1-203ENST00000543508 CFTRP13569 1480 aa20.5■□□□□ 0.87
TPRX1-203ENST00000543508 CC2D2AQ9P2K1 1620 aa20.5■□□□□ 0.87
TPRX1-203ENST00000543508 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
TPRX1-203ENST00000543508 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
TPRX1-203ENST00000543508 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
TPRX1-203ENST00000543508 SOGA1O94964 1423 aa20.47■□□□□ 0.87
TPRX1-203ENST00000543508 KIF21BO75037 1637 aa20.36■□□□□ 0.85
TPRX1-203ENST00000543508 RUSC2Q8N2Y8 1516 aa20.35■□□□□ 0.85
TPRX1-203ENST00000543508 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
TPRX1-203ENST00000543508 GOLGA3Q08378 1498 aa20.32■□□□□ 0.84
TPRX1-203ENST00000543508 TNIKQ9UKE5 1360 aa20.32■□□□□ 0.84
TPRX1-203ENST00000543508 CADPSQ9ULU8 1353 aa20.3■□□□□ 0.84
TPRX1-203ENST00000543508 CUX1P39880 1505 aa20.3■□□□□ 0.84
TPRX1-203ENST00000543508 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
TPRX1-203ENST00000543508 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
TPRX1-203ENST00000543508 PCGF6Q9BYE7 350 aa20.24■□□□□ 0.83
TPRX1-203ENST00000543508 CEP162Q5TB80 1403 aa20.22■□□□□ 0.83
TPRX1-203ENST00000543508 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
TPRX1-203ENST00000543508 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
TPRX1-203ENST00000543508 LAMC3Q9Y6N6 1575 aa20.11■□□□□ 0.81
TPRX1-203ENST00000543508 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
TPRX1-203ENST00000543508 PRXQ9BXM0 1461 aa20.1■□□□□ 0.81
TPRX1-203ENST00000543508 FANCD2Q9BXW9 1451 aa20.09■□□□□ 0.81
TPRX1-203ENST00000543508 HRCP23327 699 aa20.08■□□□□ 0.81
TPRX1-203ENST00000543508 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
TPRX1-203ENST00000543508 UBTFP17480 764 aaKnown RBP20.05■□□□□ 0.8
TPRX1-203ENST00000543508 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
TPRX1-203ENST00000543508 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
TPRX1-203ENST00000543508 CLIP1P30622 1438 aa19.97■□□□□ 0.79
TPRX1-203ENST00000543508 NESP48681 1621 aa19.95■□□□□ 0.78
TPRX1-203ENST00000543508 TOPBP1Q92547 1522 aa19.93■□□□□ 0.78
TPRX1-203ENST00000543508 CUX2O14529 1486 aa19.92■□□□□ 0.78
TPRX1-203ENST00000543508 VPS8Q8N3P4 1428 aa19.89■□□□□ 0.77
TPRX1-203ENST00000543508 ABCA10Q8WWZ4 1543 aa19.89■□□□□ 0.77
TPRX1-203ENST00000543508 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
TPRX1-203ENST00000543508 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
TPRX1-203ENST00000543508 IGF1RP08069 1367 aa19.85■□□□□ 0.77
TPRX1-203ENST00000543508 WDR97A6NE52 1622 aa19.82■□□□□ 0.76
TPRX1-203ENST00000543508 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
TPRX1-203ENST00000543508 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
TPRX1-203ENST00000543508 CUL7Q14999 1698 aa19.77■□□□□ 0.75
TPRX1-203ENST00000543508 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
TPRX1-203ENST00000543508 ARAP1Q96P48 1450 aa19.76■□□□□ 0.75
TPRX1-203ENST00000543508 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
TPRX1-203ENST00000543508 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
TPRX1-203ENST00000543508 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
TPRX1-203ENST00000543508 ZEB1P37275 1124 aaPredicted RBP19.69■□□□□ 0.74
TPRX1-203ENST00000543508 PPARGC1BQ86YN6 1023 aaKnown RBP19.68■□□□□ 0.74
TPRX1-203ENST00000543508 ARHGAP35Q9NRY4 1499 aa19.66■□□□□ 0.74
TPRX1-203ENST00000543508 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
TPRX1-203ENST00000543508 MRC2Q9UBG0 1479 aa19.63■□□□□ 0.73
TPRX1-203ENST00000543508 CTTNBP2Q8WZ74 1663 aa19.58■□□□□ 0.73
TPRX1-203ENST00000543508 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.72
TPRX1-203ENST00000543508 EFCAB5A4FU69 1503 aa19.57■□□□□ 0.72
TPRX1-203ENST00000543508 APLP2Q06481 763 aa19.56■□□□□ 0.72
TPRX1-203ENST00000543508 WDR62O43379 1518 aa19.55■□□□□ 0.72
TPRX1-203ENST00000543508 MAP3K1Q13233 1512 aa19.55■□□□□ 0.72
TPRX1-203ENST00000543508 RANGAP1P46060 587 aaPredicted RBP19.49■□□□□ 0.71
TPRX1-203ENST00000543508 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
TPRX1-203ENST00000543508 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
TPRX1-203ENST00000543508 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
TPRX1-203ENST00000543508 IFT140Q96RY7 1462 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms