RNA–Protein interactions for RNA: ENST00000543402.1

NLRC5-225, Transcript of NLR family CARD domain containing 5, humanhuman

TSL 2

Gene NLRC5, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC5-225ENST00000543402 NISCHQ9Y2I1 1504 aa33.27■■■□□ 2.92
NLRC5-225ENST00000543402 ABCC9O60706 1549 aa30.01■■■□□ 2.4
NLRC5-225ENST00000543402 CCDC180Q9P1Z9 1646 aa29.9■■■□□ 2.38
NLRC5-225ENST00000543402 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
NLRC5-225ENST00000543402 DNAJC5BQ9UF47 199 aa28.42■■■□□ 2.14
NLRC5-225ENST00000543402 NACADO15069 1562 aa28.37■■■□□ 2.13
NLRC5-225ENST00000543402 MYO15BQ96JP2 1530 aa28.04■■■□□ 2.08
NLRC5-225ENST00000543402 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
NLRC5-225ENST00000543402 PABPN1Q86U42 306 aaKnown RBP eCLIP27.93■■■□□ 2.06
NLRC5-225ENST00000543402 UNC13AQ9UPW8 1703 aa27.78■■■□□ 2.04
NLRC5-225ENST00000543402 BICRAQ9NZM4 1560 aa27.73■■■□□ 2.03
NLRC5-225ENST00000543402 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
NLRC5-225ENST00000543402 ZCCHC6Q5VYS8 1495 aaKnown RBP27.53■■■□□ 2
NLRC5-225ENST00000543402 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
NLRC5-225ENST00000543402 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
NLRC5-225ENST00000543402 CC2D2AQ9P2K1 1620 aa27.13■■□□□ 1.93
NLRC5-225ENST00000543402 SCRIBQ14160 1630 aa27.11■■□□□ 1.93
NLRC5-225ENST00000543402 EIF4G1Q04637 1599 aaKnown RBP27.07■■□□□ 1.92
NLRC5-225ENST00000543402 DNAJC5Q9H3Z4 198 aa26.31■■□□□ 1.8
NLRC5-225ENST00000543402 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
NLRC5-225ENST00000543402 CUX2O14529 1486 aa26.09■■□□□ 1.77
NLRC5-225ENST00000543402 ATAD2BQ9ULI0 1458 aa26.08■■□□□ 1.77
NLRC5-225ENST00000543402 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
NLRC5-225ENST00000543402 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
NLRC5-225ENST00000543402 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
NLRC5-225ENST00000543402 SMARCA4P51532 1647 aa25.93■■□□□ 1.74
NLRC5-225ENST00000543402 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
NLRC5-225ENST00000543402 PEG3Q9GZU2 1588 aa25.8■■□□□ 1.72
NLRC5-225ENST00000543402 BAZ1BQ9UIG0 1483 aaKnown RBP25.76■■□□□ 1.71
NLRC5-225ENST00000543402 NESP48681 1621 aa25.74■■□□□ 1.71
NLRC5-225ENST00000543402 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
NLRC5-225ENST00000543402 MROH2BQ7Z745 1585 aa25.57■■□□□ 1.68
NLRC5-225ENST00000543402 THOC2Q8NI27 1593 aaKnown RBP25.54■■□□□ 1.68
NLRC5-225ENST00000543402 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
NLRC5-225ENST00000543402 CADPSQ9ULU8 1353 aa25.42■■□□□ 1.66
NLRC5-225ENST00000543402 KIF21AQ7Z4S6 1674 aa25.33■■□□□ 1.65
NLRC5-225ENST00000543402 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
NLRC5-225ENST00000543402 WDR62O43379 1518 aa25.21■■□□□ 1.63
NLRC5-225ENST00000543402 WIZO95785 1651 aa25.19■■□□□ 1.62
NLRC5-225ENST00000543402 CFTRP13569 1480 aa25.09■■□□□ 1.61
NLRC5-225ENST00000543402 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
NLRC5-225ENST00000543402 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
NLRC5-225ENST00000543402 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
NLRC5-225ENST00000543402 TOP2AP11388 1531 aaKnown RBP24.95■■□□□ 1.58
NLRC5-225ENST00000543402 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
NLRC5-225ENST00000543402 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
NLRC5-225ENST00000543402 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
NLRC5-225ENST00000543402 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
NLRC5-225ENST00000543402 IFT140Q96RY7 1462 aa24.65■■□□□ 1.54
NLRC5-225ENST00000543402 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
NLRC5-225ENST00000543402 ABCC8Q09428 1581 aa24.58■■□□□ 1.52
NLRC5-225ENST00000543402 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
NLRC5-225ENST00000543402 ZNF608Q9ULD9 1512 aaPredicted RBP24.56■■□□□ 1.52
NLRC5-225ENST00000543402 DNMBPQ6XZF7 1577 aa24.44■■□□□ 1.5
NLRC5-225ENST00000543402 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
NLRC5-225ENST00000543402 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
NLRC5-225ENST00000543402 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
NLRC5-225ENST00000543402 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
NLRC5-225ENST00000543402 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
NLRC5-225ENST00000543402 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
NLRC5-225ENST00000543402 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.48
NLRC5-225ENST00000543402 POLA1P09884 1462 aaPredicted RBP24.31■■□□□ 1.48
NLRC5-225ENST00000543402 CYB5RLQ6IPT4 315 aa24.21■■□□□ 1.47
NLRC5-225ENST00000543402 SOGA1O94964 1423 aa24.19■■□□□ 1.46
NLRC5-225ENST00000543402 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
NLRC5-225ENST00000543402 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
NLRC5-225ENST00000543402 CHD1O14646 1710 aa24.16■■□□□ 1.46
NLRC5-225ENST00000543402 TDRD9Q8NDG6 1382 aaKnown RBP24.14■■□□□ 1.45
NLRC5-225ENST00000543402 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
NLRC5-225ENST00000543402 FBLN2P98095 1184 aa24.13■■□□□ 1.45
NLRC5-225ENST00000543402 FGD5Q6ZNL6 1462 aa24.09■■□□□ 1.45
NLRC5-225ENST00000543402 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
NLRC5-225ENST00000543402 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
NLRC5-225ENST00000543402 CUX1P39880 1505 aa24.04■■□□□ 1.44
NLRC5-225ENST00000543402 CLASP1Q7Z460 1538 aa24.03■■□□□ 1.44
NLRC5-225ENST00000543402 GRIN2BQ13224 1484 aa24.02■■□□□ 1.44
NLRC5-225ENST00000543402 CHMP7Q8WUX9 453 aaPredicted RBP24.02■■□□□ 1.44
NLRC5-225ENST00000543402 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
NLRC5-225ENST00000543402 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
NLRC5-225ENST00000543402 TRHP20396 242 aaPredicted RBP23.96■■□□□ 1.43
NLRC5-225ENST00000543402 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.42
NLRC5-225ENST00000543402 ABCA10Q8WWZ4 1543 aa23.88■■□□□ 1.41
NLRC5-225ENST00000543402 ABCA5Q8WWZ7 1642 aa23.79■■□□□ 1.4
NLRC5-225ENST00000543402 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
NLRC5-225ENST00000543402 WRNQ14191 1432 aaPredicted RBP eCLIP23.73■■□□□ 1.39
NLRC5-225ENST00000543402 GRIN2AQ12879 1464 aa23.69■■□□□ 1.38
NLRC5-225ENST00000543402 NUP160Q12769 1436 aa23.68■■□□□ 1.38
NLRC5-225ENST00000543402 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
NLRC5-225ENST00000543402 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
NLRC5-225ENST00000543402 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
NLRC5-225ENST00000543402 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
NLRC5-225ENST00000543402 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
NLRC5-225ENST00000543402 ERICH3Q5RHP9 1530 aa23.57■■□□□ 1.36
NLRC5-225ENST00000543402 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
NLRC5-225ENST00000543402 ERCC6L2Q5T890 1561 aa23.55■■□□□ 1.36
NLRC5-225ENST00000543402 SHROOM2Q13796 1616 aa23.54■■□□□ 1.36
NLRC5-225ENST00000543402 JPH4Q96JJ6 628 aa23.42■■□□□ 1.34
NLRC5-225ENST00000543402 AEBP2Q6ZN18 517 aaPredicted RBP23.41■■□□□ 1.34
NLRC5-225ENST00000543402 PRG4Q92954 1404 aaPredicted RBP23.41■■□□□ 1.34
NLRC5-225ENST00000543402 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms