RNA–Protein interactions for RNA: ENST00000543331.1

PXN-210, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-210ENST00000543331 NISCHQ9Y2I1 1504 aa27.92■■■□□ 2.06
PXN-210ENST00000543331 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
PXN-210ENST00000543331 ABCC9O60706 1549 aa24.4■■□□□ 1.5
PXN-210ENST00000543331 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
PXN-210ENST00000543331 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
PXN-210ENST00000543331 NACADO15069 1562 aa23.22■■□□□ 1.31
PXN-210ENST00000543331 DCAF8L2P0C7V8 631 aa23.14■■□□□ 1.29
PXN-210ENST00000543331 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
PXN-210ENST00000543331 MYO15BQ96JP2 1530 aa23.06■■□□□ 1.28
PXN-210ENST00000543331 UNC13AQ9UPW8 1703 aa22.85■■□□□ 1.25
PXN-210ENST00000543331 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
PXN-210ENST00000543331 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
PXN-210ENST00000543331 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
PXN-210ENST00000543331 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
PXN-210ENST00000543331 SHROOM4Q9ULL8 1493 aa22.36■■□□□ 1.17
PXN-210ENST00000543331 EIF4G1Q04637 1599 aaKnown RBP22.07■■□□□ 1.12
PXN-210ENST00000543331 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
PXN-210ENST00000543331 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
PXN-210ENST00000543331 BAZ1AQ9NRL2 1556 aaPredicted RBP21.62■■□□□ 1.05
PXN-210ENST00000543331 SMARCA4P51532 1647 aa21.59■■□□□ 1.05
PXN-210ENST00000543331 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
PXN-210ENST00000543331 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
PXN-210ENST00000543331 NCAPD3P42695 1498 aa21.4■■□□□ 1.02
PXN-210ENST00000543331 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.01
PXN-210ENST00000543331 PEG3Q9GZU2 1588 aa21.37■■□□□ 1.01
PXN-210ENST00000543331 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
PXN-210ENST00000543331 WIZO95785 1651 aa21.32■■□□□ 1
PXN-210ENST00000543331 HMGXB3Q12766 1538 aa21.29■■□□□ 1
PXN-210ENST00000543331 BAZ1BQ9UIG0 1483 aaKnown RBP21.21■□□□□ 0.99
PXN-210ENST00000543331 SUPT5HO00267 1087 aaKnown RBP21.18■□□□□ 0.98
PXN-210ENST00000543331 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
PXN-210ENST00000543331 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
PXN-210ENST00000543331 NESP48681 1621 aa21.02■□□□□ 0.96
PXN-210ENST00000543331 CUX2O14529 1486 aa20.94■□□□□ 0.94
PXN-210ENST00000543331 LAMC3Q9Y6N6 1575 aa20.92■□□□□ 0.94
PXN-210ENST00000543331 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
PXN-210ENST00000543331 KIF21AQ7Z4S6 1674 aa20.79■□□□□ 0.92
PXN-210ENST00000543331 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
PXN-210ENST00000543331 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
PXN-210ENST00000543331 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
PXN-210ENST00000543331 DNAJC5Q9H3Z4 198 aa20.66■□□□□ 0.9
PXN-210ENST00000543331 CFTRP13569 1480 aa20.63■□□□□ 0.89
PXN-210ENST00000543331 MRC2Q9UBG0 1479 aa20.6■□□□□ 0.89
PXN-210ENST00000543331 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
PXN-210ENST00000543331 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
PXN-210ENST00000543331 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
PXN-210ENST00000543331 WDR62O43379 1518 aa20.54■□□□□ 0.88
PXN-210ENST00000543331 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
PXN-210ENST00000543331 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
PXN-210ENST00000543331 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
PXN-210ENST00000543331 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
PXN-210ENST00000543331 DNMBPQ6XZF7 1577 aa20.19■□□□□ 0.82
PXN-210ENST00000543331 CUX1P39880 1505 aa20.17■□□□□ 0.82
PXN-210ENST00000543331 SYNJ1O43426 1573 aa20.15■□□□□ 0.82
PXN-210ENST00000543331 IFT140Q96RY7 1462 aa20.14■□□□□ 0.81
PXN-210ENST00000543331 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
PXN-210ENST00000543331 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
PXN-210ENST00000543331 ZNF608Q9ULD9 1512 aaPredicted RBP20.08■□□□□ 0.81
PXN-210ENST00000543331 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
PXN-210ENST00000543331 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
PXN-210ENST00000543331 CHIC1Q5VXU3 224 aa20.02■□□□□ 0.8
PXN-210ENST00000543331 OSCARQ8IYS5 282 aa20.01■□□□□ 0.79
PXN-210ENST00000543331 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
PXN-210ENST00000543331 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
PXN-210ENST00000543331 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
PXN-210ENST00000543331 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
PXN-210ENST00000543331 SOGA1O94964 1423 aa19.92■□□□□ 0.78
PXN-210ENST00000543331 AQRO60306 1485 aaKnown RBP eCLIP19.92■□□□□ 0.782e-6■■■□□ 15.2
PXN-210ENST00000543331 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
PXN-210ENST00000543331 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
PXN-210ENST00000543331 CHD1O14646 1710 aa19.84■□□□□ 0.77
PXN-210ENST00000543331 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.77
PXN-210ENST00000543331 ABCA5Q8WWZ7 1642 aa19.77■□□□□ 0.76
PXN-210ENST00000543331 FBLN2P98095 1184 aa19.76■□□□□ 0.75
PXN-210ENST00000543331 RIMBP3CA6NJZ7 1639 aa19.76■□□□□ 0.75
PXN-210ENST00000543331 RIMBP3BA6NNM3 1639 aa19.76■□□□□ 0.75
PXN-210ENST00000543331 RIMBP3Q9UFD9 1639 aa19.76■□□□□ 0.75
PXN-210ENST00000543331 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
PXN-210ENST00000543331 KIF27Q86VH2 1401 aa19.73■□□□□ 0.75
PXN-210ENST00000543331 GRIN2BQ13224 1484 aa19.71■□□□□ 0.75
PXN-210ENST00000543331 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
PXN-210ENST00000543331 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
PXN-210ENST00000543331 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
PXN-210ENST00000543331 PBRM1Q86U86 1689 aa19.69■□□□□ 0.74
PXN-210ENST00000543331 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
PXN-210ENST00000543331 EEA1Q15075 1411 aa19.66■□□□□ 0.74
PXN-210ENST00000543331 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
PXN-210ENST00000543331 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.73
PXN-210ENST00000543331 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
PXN-210ENST00000543331 IGF1RP08069 1367 aa19.57■□□□□ 0.72
PXN-210ENST00000543331 CLASP1Q7Z460 1538 aa19.57■□□□□ 0.72
PXN-210ENST00000543331 CUL7Q14999 1698 aa19.56■□□□□ 0.72
PXN-210ENST00000543331 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
PXN-210ENST00000543331 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
PXN-210ENST00000543331 CYB5RLQ6IPT4 315 aa19.54■□□□□ 0.72
PXN-210ENST00000543331 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
PXN-210ENST00000543331 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
PXN-210ENST00000543331 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
PXN-210ENST00000543331 CARMIL1Q5VZK9 1371 aa19.48■□□□□ 0.71
PXN-210ENST00000543331 PRXQ9BXM0 1461 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms