RNA–Protein interactions for RNA: ENST00000543087.5

TSG101-208, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-208ENST00000543087 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
TSG101-208ENST00000543087 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
TSG101-208ENST00000543087 ABCC9O60706 1549 aa28.53■■■□□ 2.16
TSG101-208ENST00000543087 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
TSG101-208ENST00000543087 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
TSG101-208ENST00000543087 NACADO15069 1562 aa27.09■■□□□ 1.93
TSG101-208ENST00000543087 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
TSG101-208ENST00000543087 UNC13AQ9UPW8 1703 aa26.7■■□□□ 1.87
TSG101-208ENST00000543087 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
TSG101-208ENST00000543087 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
TSG101-208ENST00000543087 DNAJC5BQ9UF47 199 aa26.54■■□□□ 1.84
TSG101-208ENST00000543087 DCAF1Q9Y4B6 1507 aa26.52■■□□□ 1.84
TSG101-208ENST00000543087 BICRAQ9NZM4 1560 aa26.43■■□□□ 1.82
TSG101-208ENST00000543087 SCRIBQ14160 1630 aa26.27■■□□□ 1.8
TSG101-208ENST00000543087 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
TSG101-208ENST00000543087 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
TSG101-208ENST00000543087 EIF4G1Q04637 1599 aaKnown RBP25.75■■□□□ 1.71
TSG101-208ENST00000543087 CECR2Q9BXF3 1484 aa25.64■■□□□ 1.69
TSG101-208ENST00000543087 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
TSG101-208ENST00000543087 NCAPD3P42695 1498 aa24.99■■□□□ 1.59
TSG101-208ENST00000543087 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
TSG101-208ENST00000543087 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
TSG101-208ENST00000543087 SMARCA2P51531 1590 aa24.92■■□□□ 1.58
TSG101-208ENST00000543087 MROH2BQ7Z745 1585 aa24.82■■□□□ 1.56
TSG101-208ENST00000543087 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
TSG101-208ENST00000543087 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
TSG101-208ENST00000543087 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
TSG101-208ENST00000543087 ERCC6Q03468 1493 aa24.6■■□□□ 1.53
TSG101-208ENST00000543087 NESP48681 1621 aa24.6■■□□□ 1.53
TSG101-208ENST00000543087 WIZO95785 1651 aa24.58■■□□□ 1.53
TSG101-208ENST00000543087 LAMC3Q9Y6N6 1575 aa24.4■■□□□ 1.5
TSG101-208ENST00000543087 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
TSG101-208ENST00000543087 CUX2O14529 1486 aa24.38■■□□□ 1.49
TSG101-208ENST00000543087 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
TSG101-208ENST00000543087 CADPSQ9ULU8 1353 aa24.28■■□□□ 1.48
TSG101-208ENST00000543087 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
TSG101-208ENST00000543087 THOC2Q8NI27 1593 aaKnown RBP24.22■■□□□ 1.47
TSG101-208ENST00000543087 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.47
TSG101-208ENST00000543087 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
TSG101-208ENST00000543087 CFTRP13569 1480 aa24.04■■□□□ 1.44
TSG101-208ENST00000543087 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
TSG101-208ENST00000543087 FANCD2Q9BXW9 1451 aa24.01■■□□□ 1.43
TSG101-208ENST00000543087 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
TSG101-208ENST00000543087 CCDC88BA6NC98 1476 aa23.98■■□□□ 1.43
TSG101-208ENST00000543087 WDR62O43379 1518 aa23.94■■□□□ 1.42
TSG101-208ENST00000543087 PRDM2Q13029 1718 aa23.89■■□□□ 1.41
TSG101-208ENST00000543087 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
TSG101-208ENST00000543087 SUPT5HO00267 1087 aaKnown RBP23.67■■□□□ 1.38
TSG101-208ENST00000543087 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
TSG101-208ENST00000543087 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
TSG101-208ENST00000543087 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
TSG101-208ENST00000543087 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
TSG101-208ENST00000543087 ZNF608Q9ULD9 1512 aaPredicted RBP23.48■■□□□ 1.35
TSG101-208ENST00000543087 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
TSG101-208ENST00000543087 TARBP1Q13395 1621 aaKnown RBP23.36■■□□□ 1.33
TSG101-208ENST00000543087 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
TSG101-208ENST00000543087 EIF4G3O43432 1585 aaKnown RBP23.34■■□□□ 1.33
TSG101-208ENST00000543087 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.32
TSG101-208ENST00000543087 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
TSG101-208ENST00000543087 SOGA1O94964 1423 aa23.3■■□□□ 1.32
TSG101-208ENST00000543087 CUX1P39880 1505 aa23.29■■□□□ 1.32
TSG101-208ENST00000543087 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
TSG101-208ENST00000543087 FGD5Q6ZNL6 1462 aa23.27■■□□□ 1.32
TSG101-208ENST00000543087 TDRD9Q8NDG6 1382 aaKnown RBP23.24■■□□□ 1.31
TSG101-208ENST00000543087 FBLN2P98095 1184 aa23.19■■□□□ 1.3
TSG101-208ENST00000543087 CHD1O14646 1710 aa23.18■■□□□ 1.3
TSG101-208ENST00000543087 WDR97A6NE52 1622 aa23.07■■□□□ 1.28
TSG101-208ENST00000543087 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
TSG101-208ENST00000543087 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
TSG101-208ENST00000543087 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
TSG101-208ENST00000543087 SNAPC4Q5SXM2 1469 aa23.06■■□□□ 1.28
TSG101-208ENST00000543087 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
TSG101-208ENST00000543087 WRNQ14191 1432 aaPredicted RBP eCLIP23.01■■□□□ 1.27
TSG101-208ENST00000543087 CHMP7Q8WUX9 453 aaPredicted RBP23.01■■□□□ 1.27
TSG101-208ENST00000543087 PBRM1Q86U86 1689 aa23■■□□□ 1.27
TSG101-208ENST00000543087 GAPVD1Q14C86 1478 aa23■■□□□ 1.27
TSG101-208ENST00000543087 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
TSG101-208ENST00000543087 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
TSG101-208ENST00000543087 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
TSG101-208ENST00000543087 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
TSG101-208ENST00000543087 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
TSG101-208ENST00000543087 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
TSG101-208ENST00000543087 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
TSG101-208ENST00000543087 SYNJ2O15056 1496 aa22.91■■□□□ 1.26
TSG101-208ENST00000543087 CYB5RLQ6IPT4 315 aa22.9■■□□□ 1.26
TSG101-208ENST00000543087 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
TSG101-208ENST00000543087 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
TSG101-208ENST00000543087 ADAMTS12P58397 1594 aa22.74■■□□□ 1.23
TSG101-208ENST00000543087 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
TSG101-208ENST00000543087 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.22
TSG101-208ENST00000543087 ERICH3Q5RHP9 1530 aa22.7■■□□□ 1.22
TSG101-208ENST00000543087 CEP170Q5SW79 1584 aa22.65■■□□□ 1.22
TSG101-208ENST00000543087 NUP160Q12769 1436 aa22.61■■□□□ 1.21
TSG101-208ENST00000543087 TRHP20396 242 aaPredicted RBP22.57■■□□□ 1.2
TSG101-208ENST00000543087 ERCC6L2Q5T890 1561 aa22.56■■□□□ 1.2
TSG101-208ENST00000543087 KIF27Q86VH2 1401 aa22.55■■□□□ 1.2
TSG101-208ENST00000543087 IGF1RP08069 1367 aa22.52■■□□□ 1.2
TSG101-208ENST00000543087 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
TSG101-208ENST00000543087 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
TSG101-208ENST00000543087 CUL7Q14999 1698 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms