RNA–Protein interactions for RNA: ENST00000542966.1

SCNN1A-219, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 560 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-219ENST00000542966 NISCHQ9Y2I1 1504 aa40.59■■■■■ 4.09
SCNN1A-219ENST00000542966 CCDC180Q9P1Z9 1646 aa36.17■■■■□ 3.38
SCNN1A-219ENST00000542966 ABCC9O60706 1549 aa35.83■■■■□ 3.33
SCNN1A-219ENST00000542966 RB1CC1Q8TDY2 1594 aa34.24■■■■□ 3.07
SCNN1A-219ENST00000542966 DCAF8L2P0C7V8 631 aa34.19■■■■□ 3.06
SCNN1A-219ENST00000542966 NACADO15069 1562 aa34.11■■■■□ 3.05
SCNN1A-219ENST00000542966 DNAJC5BQ9UF47 199 aa33.84■■■■□ 3.01
SCNN1A-219ENST00000542966 MYO15BQ96JP2 1530 aa33.75■■■□□ 2.99
SCNN1A-219ENST00000542966 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
SCNN1A-219ENST00000542966 DCAF1Q9Y4B6 1507 aa33.51■■■□□ 2.95
SCNN1A-219ENST00000542966 PABPN1Q86U42 306 aaKnown RBP eCLIP33.47■■■□□ 2.95
SCNN1A-219ENST00000542966 UNC13AQ9UPW8 1703 aa33.45■■■□□ 2.94
SCNN1A-219ENST00000542966 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
SCNN1A-219ENST00000542966 SCRIBQ14160 1630 aa33.08■■■□□ 2.89
SCNN1A-219ENST00000542966 SHROOM4Q9ULL8 1493 aa32.79■■■□□ 2.84
SCNN1A-219ENST00000542966 EIF4G1Q04637 1599 aaKnown RBP32.4■■■□□ 2.78
SCNN1A-219ENST00000542966 CC2D2AQ9P2K1 1620 aa32.35■■■□□ 2.77
SCNN1A-219ENST00000542966 CECR2Q9BXF3 1484 aa32.21■■■□□ 2.75
SCNN1A-219ENST00000542966 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
SCNN1A-219ENST00000542966 NCAPD3P42695 1498 aa31.5■■■□□ 2.63
SCNN1A-219ENST00000542966 ATAD2BQ9ULI0 1458 aa31.49■■■□□ 2.63
SCNN1A-219ENST00000542966 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
SCNN1A-219ENST00000542966 SMARCA2P51531 1590 aa31.41■■■□□ 2.62
SCNN1A-219ENST00000542966 MROH2BQ7Z745 1585 aa31.31■■■□□ 2.6
SCNN1A-219ENST00000542966 HMGXB3Q12766 1538 aa31.29■■■□□ 2.6
SCNN1A-219ENST00000542966 DNAJC5Q9H3Z4 198 aa31.28■■■□□ 2.6
SCNN1A-219ENST00000542966 BAZ1BQ9UIG0 1483 aaKnown RBP31.22■■■□□ 2.59
SCNN1A-219ENST00000542966 PEG3Q9GZU2 1588 aa31.22■■■□□ 2.59
SCNN1A-219ENST00000542966 WIZO95785 1651 aa30.95■■■□□ 2.55
SCNN1A-219ENST00000542966 NESP48681 1621 aa30.91■■■□□ 2.54
SCNN1A-219ENST00000542966 ERCC6Q03468 1493 aa30.91■■■□□ 2.54
SCNN1A-219ENST00000542966 RSF1Q96T23 1441 aaPredicted RBP30.83■■■□□ 2.53
SCNN1A-219ENST00000542966 CUX2O14529 1486 aa30.76■■■□□ 2.51
SCNN1A-219ENST00000542966 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
SCNN1A-219ENST00000542966 CADPSQ9ULU8 1353 aa30.59■■■□□ 2.49
SCNN1A-219ENST00000542966 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.49
SCNN1A-219ENST00000542966 PDS5BQ9NTI5 1447 aa30.55■■■□□ 2.48
SCNN1A-219ENST00000542966 KIF21AQ7Z4S6 1674 aa30.49■■■□□ 2.47
SCNN1A-219ENST00000542966 THOC2Q8NI27 1593 aaKnown RBP30.45■■■□□ 2.47
SCNN1A-219ENST00000542966 CFTRP13569 1480 aa30.33■■■□□ 2.45
SCNN1A-219ENST00000542966 MRC2Q9UBG0 1479 aa30.26■■■□□ 2.44
SCNN1A-219ENST00000542966 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
SCNN1A-219ENST00000542966 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
SCNN1A-219ENST00000542966 CEP164Q9UPV0 1460 aa30.24■■■□□ 2.43
SCNN1A-219ENST00000542966 WDR62O43379 1518 aa30.16■■■□□ 2.42
SCNN1A-219ENST00000542966 PRDM2Q13029 1718 aa29.99■■■□□ 2.39
SCNN1A-219ENST00000542966 URB2Q14146 1524 aaKnown RBP29.97■■■□□ 2.39
SCNN1A-219ENST00000542966 SUPT5HO00267 1087 aaKnown RBP29.89■■■□□ 2.38
SCNN1A-219ENST00000542966 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
SCNN1A-219ENST00000542966 TOPBP1Q92547 1522 aa29.72■■■□□ 2.35
SCNN1A-219ENST00000542966 ABCC8Q09428 1581 aa29.66■■■□□ 2.34
SCNN1A-219ENST00000542966 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.34
SCNN1A-219ENST00000542966 IFT140Q96RY7 1462 aa29.61■■■□□ 2.33
SCNN1A-219ENST00000542966 ZNF608Q9ULD9 1512 aaPredicted RBP29.54■■■□□ 2.32
SCNN1A-219ENST00000542966 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
SCNN1A-219ENST00000542966 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
SCNN1A-219ENST00000542966 TARBP1Q13395 1621 aaKnown RBP29.4■■■□□ 2.3
SCNN1A-219ENST00000542966 CUX1P39880 1505 aa29.39■■■□□ 2.3
SCNN1A-219ENST00000542966 RAD54L2Q9Y4B4 1467 aa29.37■■■□□ 2.29
SCNN1A-219ENST00000542966 EIF4G3O43432 1585 aaKnown RBP29.37■■■□□ 2.29
SCNN1A-219ENST00000542966 FGD5Q6ZNL6 1462 aa29.35■■■□□ 2.29
SCNN1A-219ENST00000542966 SOGA1O94964 1423 aa29.34■■■□□ 2.29
SCNN1A-219ENST00000542966 AQRO60306 1485 aaKnown RBP eCLIP29.34■■■□□ 2.29
SCNN1A-219ENST00000542966 TDRD9Q8NDG6 1382 aaKnown RBP29.25■■■□□ 2.27
SCNN1A-219ENST00000542966 FBLN2P98095 1184 aa29.1■■■□□ 2.25
SCNN1A-219ENST00000542966 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
SCNN1A-219ENST00000542966 WRNQ14191 1432 aaPredicted RBP eCLIP29.08■■■□□ 2.25
SCNN1A-219ENST00000542966 CHD1O14646 1710 aa29.06■■■□□ 2.24
SCNN1A-219ENST00000542966 SNAPC4Q5SXM2 1469 aa29.05■■■□□ 2.24
SCNN1A-219ENST00000542966 SYNJ1O43426 1573 aa29.02■■■□□ 2.24
SCNN1A-219ENST00000542966 GRIN2BQ13224 1484 aa29.02■■■□□ 2.24
SCNN1A-219ENST00000542966 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
SCNN1A-219ENST00000542966 ABCA10Q8WWZ4 1543 aa29.01■■■□□ 2.23
SCNN1A-219ENST00000542966 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
SCNN1A-219ENST00000542966 GAPVD1Q14C86 1478 aa28.98■■■□□ 2.23
SCNN1A-219ENST00000542966 RIMBP3CA6NJZ7 1639 aa28.97■■■□□ 2.23
SCNN1A-219ENST00000542966 RIMBP3BA6NNM3 1639 aa28.97■■■□□ 2.23
SCNN1A-219ENST00000542966 RIMBP3Q9UFD9 1639 aa28.97■■■□□ 2.23
SCNN1A-219ENST00000542966 MAGI1Q96QZ7 1491 aaPredicted RBP28.95■■■□□ 2.22
SCNN1A-219ENST00000542966 CHMP7Q8WUX9 453 aaPredicted RBP28.94■■■□□ 2.22
SCNN1A-219ENST00000542966 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
SCNN1A-219ENST00000542966 PBRM1Q86U86 1689 aa28.91■■■□□ 2.22
SCNN1A-219ENST00000542966 SYNJ2O15056 1496 aa28.87■■■□□ 2.21
SCNN1A-219ENST00000542966 ARHGEF11O15085 1522 aa28.87■■■□□ 2.21
SCNN1A-219ENST00000542966 CYB5RLQ6IPT4 315 aa28.84■■■□□ 2.21
SCNN1A-219ENST00000542966 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
SCNN1A-219ENST00000542966 ADAMTS12P58397 1594 aa28.68■■■□□ 2.18
SCNN1A-219ENST00000542966 GRIN2AQ12879 1464 aa28.65■■■□□ 2.18
SCNN1A-219ENST00000542966 ERICH3Q5RHP9 1530 aa28.64■■■□□ 2.18
SCNN1A-219ENST00000542966 FHAD1B1AJZ9 1412 aa28.63■■■□□ 2.17
SCNN1A-219ENST00000542966 TRHP20396 242 aaPredicted RBP28.63■■■□□ 2.17
SCNN1A-219ENST00000542966 ARAP1Q96P48 1450 aa28.62■■■□□ 2.17
SCNN1A-219ENST00000542966 NUP160Q12769 1436 aa28.52■■■□□ 2.16
SCNN1A-219ENST00000542966 CEP170Q5SW79 1584 aa28.52■■■□□ 2.16
SCNN1A-219ENST00000542966 KIF27Q86VH2 1401 aa28.5■■■□□ 2.15
SCNN1A-219ENST00000542966 IGF1RP08069 1367 aa28.42■■■□□ 2.14
SCNN1A-219ENST00000542966 ERCC6L2Q5T890 1561 aa28.36■■■□□ 2.13
SCNN1A-219ENST00000542966 SHROOM2Q13796 1616 aa28.31■■■□□ 2.12
SCNN1A-219ENST00000542966 CUL7Q14999 1698 aa28.31■■■□□ 2.12
SCNN1A-219ENST00000542966 CARMIL1Q5VZK9 1371 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms