RNA–Protein interactions for RNA: ENST00000542942.1

GALNT9-209, Transcript of polypeptide N-acetylgalactosaminyltransferase 9, humanhuman

TSL 4

Gene GALNT9, Length 624 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GALNT9-209ENST00000542942 NISCHQ9Y2I1 1504 aa48.23■■■■■ 5.31
GALNT9-209ENST00000542942 CCDC180Q9P1Z9 1646 aa42.82■■■■■ 4.44
GALNT9-209ENST00000542942 ABCC9O60706 1549 aa42■■■■■ 4.31
GALNT9-209ENST00000542942 DCAF8L2P0C7V8 631 aa40.51■■■■■ 4.08
GALNT9-209ENST00000542942 RB1CC1Q8TDY2 1594 aa40.35■■■■■ 4.05
GALNT9-209ENST00000542942 NACADO15069 1562 aa40.3■■■■■ 4.04
GALNT9-209ENST00000542942 ZCCHC6Q5VYS8 1495 aaKnown RBP40.16■■■■■ 4.02
GALNT9-209ENST00000542942 MYO15BQ96JP2 1530 aa40.01■■■■■ 4
GALNT9-209ENST00000542942 DCAF1Q9Y4B6 1507 aa39.86■■■■□ 3.97
GALNT9-209ENST00000542942 UNC13AQ9UPW8 1703 aa39.38■■■■□ 3.89
GALNT9-209ENST00000542942 PABPN1Q86U42 306 aaKnown RBP eCLIP39.3■■■■□ 3.88
GALNT9-209ENST00000542942 SCRIBQ14160 1630 aa39.14■■■■□ 3.86
GALNT9-209ENST00000542942 BICRAQ9NZM4 1560 aa39.08■■■■□ 3.85
GALNT9-209ENST00000542942 DNAJC5BQ9UF47 199 aa39.03■■■■□ 3.84
GALNT9-209ENST00000542942 SHROOM4Q9ULL8 1493 aa38.65■■■■□ 3.78
GALNT9-209ENST00000542942 EIF4G1Q04637 1599 aaKnown RBP38.09■■■■□ 3.69
GALNT9-209ENST00000542942 CC2D2AQ9P2K1 1620 aa37.94■■■■□ 3.66
GALNT9-209ENST00000542942 CECR2Q9BXF3 1484 aa37.71■■■■□ 3.63
GALNT9-209ENST00000542942 SMARCA4P51532 1647 aa37.41■■■■□ 3.58
GALNT9-209ENST00000542942 BAZ1AQ9NRL2 1556 aaPredicted RBP37.39■■■■□ 3.58
GALNT9-209ENST00000542942 ATAD2BQ9ULI0 1458 aa37.23■■■■□ 3.55
GALNT9-209ENST00000542942 NCAPD3P42695 1498 aa37.2■■■■□ 3.54
GALNT9-209ENST00000542942 MROH2BQ7Z745 1585 aa37.19■■■■□ 3.54
GALNT9-209ENST00000542942 SMARCA2P51531 1590 aa37.17■■■■□ 3.54
GALNT9-209ENST00000542942 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
GALNT9-209ENST00000542942 HMGXB3Q12766 1538 aa36.98■■■■□ 3.51
GALNT9-209ENST00000542942 BAZ1BQ9UIG0 1483 aaKnown RBP36.94■■■■□ 3.5
GALNT9-209ENST00000542942 WIZO95785 1651 aa36.79■■■■□ 3.48
GALNT9-209ENST00000542942 RSF1Q96T23 1441 aaPredicted RBP36.78■■■■□ 3.48
GALNT9-209ENST00000542942 TOP2AP11388 1531 aaKnown RBP36.38■■■■□ 3.41
GALNT9-209ENST00000542942 NESP48681 1621 aa36.32■■■■□ 3.4
GALNT9-209ENST00000542942 LAMC3Q9Y6N6 1575 aa36.2■■■■□ 3.39
GALNT9-209ENST00000542942 ERCC6Q03468 1493 aa36.2■■■■□ 3.39
GALNT9-209ENST00000542942 CADPSQ9ULU8 1353 aa36.15■■■■□ 3.38
GALNT9-209ENST00000542942 SUPT5HO00267 1087 aaKnown RBP36.01■■■■□ 3.36
GALNT9-209ENST00000542942 PDS5BQ9NTI5 1447 aa36■■■■□ 3.35
GALNT9-209ENST00000542942 CCDC88BA6NC98 1476 aa35.99■■■■□ 3.35
GALNT9-209ENST00000542942 CUX2O14529 1486 aa35.93■■■■□ 3.34
GALNT9-209ENST00000542942 CFTRP13569 1480 aa35.9■■■■□ 3.34
GALNT9-209ENST00000542942 KIF21AQ7Z4S6 1674 aa35.84■■■■□ 3.33
GALNT9-209ENST00000542942 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
GALNT9-209ENST00000542942 DNAJC5Q9H3Z4 198 aa35.71■■■■□ 3.31
GALNT9-209ENST00000542942 THOC2Q8NI27 1593 aaKnown RBP35.7■■■■□ 3.31
GALNT9-209ENST00000542942 CEP164Q9UPV0 1460 aa35.67■■■■□ 3.3
GALNT9-209ENST00000542942 MRC2Q9UBG0 1479 aa35.61■■■■□ 3.29
GALNT9-209ENST00000542942 PRDM2Q13029 1718 aa35.57■■■■□ 3.29
GALNT9-209ENST00000542942 WDR62O43379 1518 aa35.45■■■■□ 3.27
GALNT9-209ENST00000542942 URB2Q14146 1524 aaKnown RBP35.34■■■■□ 3.25
GALNT9-209ENST00000542942 ABCC8Q09428 1581 aa35.16■■■■□ 3.22
GALNT9-209ENST00000542942 TOPBP1Q92547 1522 aa35.15■■■■□ 3.22
GALNT9-209ENST00000542942 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
GALNT9-209ENST00000542942 IFT140Q96RY7 1462 aa34.92■■■■□ 3.18
GALNT9-209ENST00000542942 CUX1P39880 1505 aa34.87■■■■□ 3.17
GALNT9-209ENST00000542942 POLA1P09884 1462 aaPredicted RBP34.84■■■■□ 3.17
GALNT9-209ENST00000542942 FGD5Q6ZNL6 1462 aa34.78■■■■□ 3.16
GALNT9-209ENST00000542942 ZNF608Q9ULD9 1512 aaPredicted RBP34.76■■■■□ 3.16
GALNT9-209ENST00000542942 SOGA1O94964 1423 aa34.76■■■■□ 3.16
GALNT9-209ENST00000542942 RAD54L2Q9Y4B4 1467 aa34.73■■■■□ 3.15
GALNT9-209ENST00000542942 TARBP1Q13395 1621 aaKnown RBP34.72■■■■□ 3.15
GALNT9-209ENST00000542942 WRNQ14191 1432 aaPredicted RBP eCLIP34.71■■■■□ 3.15
GALNT9-209ENST00000542942 AQRO60306 1485 aaKnown RBP eCLIP34.61■■■■□ 3.13
GALNT9-209ENST00000542942 EIF4G3O43432 1585 aaKnown RBP34.59■■■■□ 3.13
GALNT9-209ENST00000542942 TOP2BQ02880 1626 aa34.57■■■■□ 3.12
GALNT9-209ENST00000542942 TDRD9Q8NDG6 1382 aaKnown RBP34.57■■■■□ 3.12
GALNT9-209ENST00000542942 SYNJ1O43426 1573 aa34.57■■■■□ 3.12
GALNT9-209ENST00000542942 BIVM-ERCC5R4GMW8 1640 aa34.55■■■■□ 3.12
GALNT9-209ENST00000542942 WDR97A6NE52 1622 aa34.43■■■■□ 3.1
GALNT9-209ENST00000542942 ABCA10Q8WWZ4 1543 aa34.42■■■■□ 3.1
GALNT9-209ENST00000542942 OSCARQ8IYS5 282 aa34.38■■■■□ 3.09
GALNT9-209ENST00000542942 GAPVD1Q14C86 1478 aa34.33■■■■□ 3.09
GALNT9-209ENST00000542942 GRIN2BQ13224 1484 aa34.31■■■■□ 3.08
GALNT9-209ENST00000542942 FBLN2P98095 1184 aa34.29■■■■□ 3.08
GALNT9-209ENST00000542942 SNAPC4Q5SXM2 1469 aa34.26■■■■□ 3.07
GALNT9-209ENST00000542942 ABCA5Q8WWZ7 1642 aa34.25■■■■□ 3.07
GALNT9-209ENST00000542942 PBRM1Q86U86 1689 aa34.2■■■■□ 3.07
GALNT9-209ENST00000542942 MAGI1Q96QZ7 1491 aaPredicted RBP34.2■■■■□ 3.06
GALNT9-209ENST00000542942 CHMP7Q8WUX9 453 aaPredicted RBP34.16■■■■□ 3.06
GALNT9-209ENST00000542942 CHD1O14646 1710 aa34.16■■■■□ 3.06
GALNT9-209ENST00000542942 TRIM41Q8WV44 630 aa34.15■■■■□ 3.06
GALNT9-209ENST00000542942 SYNJ2O15056 1496 aa34.07■■■■□ 3.05
GALNT9-209ENST00000542942 ERICH3Q5RHP9 1530 aa34■■■■□ 3.03
GALNT9-209ENST00000542942 KIF27Q86VH2 1401 aa33.98■■■■□ 3.03
GALNT9-209ENST00000542942 FHAD1B1AJZ9 1412 aa33.93■■■■□ 3.02
GALNT9-209ENST00000542942 ADAMTS12P58397 1594 aa33.93■■■■□ 3.02
GALNT9-209ENST00000542942 RIMBP3CA6NJZ7 1639 aa33.89■■■■□ 3.02
GALNT9-209ENST00000542942 RIMBP3BA6NNM3 1639 aa33.89■■■■□ 3.02
GALNT9-209ENST00000542942 RIMBP3Q9UFD9 1639 aa33.89■■■■□ 3.02
GALNT9-209ENST00000542942 GRIN2AQ12879 1464 aa33.86■■■■□ 3.01
GALNT9-209ENST00000542942 IGF1RP08069 1367 aa33.85■■■■□ 3.01
GALNT9-209ENST00000542942 ARHGEF11O15085 1522 aa33.78■■■■□ 3
GALNT9-209ENST00000542942 CLASP1Q7Z460 1538 aa33.77■■■■□ 3
GALNT9-209ENST00000542942 CUL7Q14999 1698 aa33.69■■■□□ 2.98
GALNT9-209ENST00000542942 NUP160Q12769 1436 aa33.69■■■□□ 2.98
GALNT9-209ENST00000542942 RUSC2Q8N2Y8 1516 aa33.69■■■□□ 2.98
GALNT9-209ENST00000542942 CARMIL1Q5VZK9 1371 aa33.67■■■□□ 2.98
GALNT9-209ENST00000542942 CEP170Q5SW79 1584 aa33.67■■■□□ 2.98
GALNT9-209ENST00000542942 CHIC1Q5VXU3 224 aa33.57■■■□□ 2.96
GALNT9-209ENST00000542942 CYB5RLQ6IPT4 315 aa33.53■■■□□ 2.96
GALNT9-209ENST00000542942 ARAP1Q96P48 1450 aa33.47■■■□□ 2.95
GALNT9-209ENST00000542942 JPH4Q96JJ6 628 aa33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms