RNA–Protein interactions for RNA: ENST00000542907.5

CWC15-204, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 3

Gene CWC15, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-204ENST00000542907 NISCHQ9Y2I1 1504 aa40■■■■□ 3.99
CWC15-204ENST00000542907 CCDC180Q9P1Z9 1646 aa35.77■■■■□ 3.32
CWC15-204ENST00000542907 ABCC9O60706 1549 aa35.75■■■■□ 3.31
CWC15-204ENST00000542907 RB1CC1Q8TDY2 1594 aa34.08■■■■□ 3.05
CWC15-204ENST00000542907 NACADO15069 1562 aa33.89■■■■□ 3.02
CWC15-204ENST00000542907 DCAF8L2P0C7V8 631 aa33.88■■■■□ 3.01
CWC15-204ENST00000542907 MYO15BQ96JP2 1530 aa33.47■■■□□ 2.95
CWC15-204ENST00000542907 DNAJC5BQ9UF47 199 aa33.45■■■□□ 2.95
CWC15-204ENST00000542907 PABPN1Q86U42 306 aaKnown RBP eCLIP33.37■■■□□ 2.93
CWC15-204ENST00000542907 ZCCHC6Q5VYS8 1495 aaKnown RBP33.15■■■□□ 2.9
CWC15-204ENST00000542907 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
CWC15-204ENST00000542907 DCAF1Q9Y4B6 1507 aa33.07■■■□□ 2.88
CWC15-204ENST00000542907 BICRAQ9NZM4 1560 aa33■■■□□ 2.87
CWC15-204ENST00000542907 SHROOM4Q9ULL8 1493 aa32.69■■■□□ 2.82
CWC15-204ENST00000542907 SCRIBQ14160 1630 aa32.62■■■□□ 2.81
CWC15-204ENST00000542907 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.75
CWC15-204ENST00000542907 EIF4G1Q04637 1599 aaKnown RBP32.23■■■□□ 2.75
CWC15-204ENST00000542907 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
CWC15-204ENST00000542907 NCAPD3P42695 1498 aa31.31■■■□□ 2.6
CWC15-204ENST00000542907 ATAD2BQ9ULI0 1458 aa31.21■■■□□ 2.59
CWC15-204ENST00000542907 SMARCA2P51531 1590 aa31.13■■■□□ 2.57
CWC15-204ENST00000542907 SMARCA4P51532 1647 aa31.13■■■□□ 2.57
CWC15-204ENST00000542907 BAZ1AQ9NRL2 1556 aaPredicted RBP31.06■■■□□ 2.56
CWC15-204ENST00000542907 HMGXB3Q12766 1538 aa31.03■■■□□ 2.56
CWC15-204ENST00000542907 BAZ1BQ9UIG0 1483 aaKnown RBP30.93■■■□□ 2.54
CWC15-204ENST00000542907 ERCC6Q03468 1493 aa30.92■■■□□ 2.54
CWC15-204ENST00000542907 PEG3Q9GZU2 1588 aa30.85■■■□□ 2.53
CWC15-204ENST00000542907 CUX2O14529 1486 aa30.81■■■□□ 2.52
CWC15-204ENST00000542907 MROH2BQ7Z745 1585 aa30.79■■■□□ 2.52
CWC15-204ENST00000542907 DNAJC5Q9H3Z4 198 aa30.72■■■□□ 2.51
CWC15-204ENST00000542907 NESP48681 1621 aa30.7■■■□□ 2.51
CWC15-204ENST00000542907 LAMC3Q9Y6N6 1575 aa30.54■■■□□ 2.48
CWC15-204ENST00000542907 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
CWC15-204ENST00000542907 CADPSQ9ULU8 1353 aa30.4■■■□□ 2.46
CWC15-204ENST00000542907 WIZO95785 1651 aa30.38■■■□□ 2.45
CWC15-204ENST00000542907 THOC2Q8NI27 1593 aaKnown RBP30.32■■■□□ 2.44
CWC15-204ENST00000542907 RSF1Q96T23 1441 aaPredicted RBP30.25■■■□□ 2.43
CWC15-204ENST00000542907 KIF21AQ7Z4S6 1674 aa30.22■■■□□ 2.43
CWC15-204ENST00000542907 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
CWC15-204ENST00000542907 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
CWC15-204ENST00000542907 CFTRP13569 1480 aa30.03■■■□□ 2.4
CWC15-204ENST00000542907 CEP164Q9UPV0 1460 aa30.03■■■□□ 2.4
CWC15-204ENST00000542907 FANCD2Q9BXW9 1451 aa30■■■□□ 2.39
CWC15-204ENST00000542907 WDR62O43379 1518 aa30■■■□□ 2.39
CWC15-204ENST00000542907 CCDC88BA6NC98 1476 aa29.76■■■□□ 2.35
CWC15-204ENST00000542907 URB2Q14146 1524 aaKnown RBP29.71■■■□□ 2.35
CWC15-204ENST00000542907 PRDM2Q13029 1718 aa29.56■■■□□ 2.32
CWC15-204ENST00000542907 OSCARQ8IYS5 282 aa29.52■■■□□ 2.32
CWC15-204ENST00000542907 ABCC8Q09428 1581 aa29.45■■■□□ 2.31
CWC15-204ENST00000542907 IFT140Q96RY7 1462 aa29.45■■■□□ 2.31
CWC15-204ENST00000542907 TOPBP1Q92547 1522 aa29.42■■■□□ 2.3
CWC15-204ENST00000542907 TRIM41Q8WV44 630 aa29.42■■■□□ 2.3
CWC15-204ENST00000542907 ZNF608Q9ULD9 1512 aaPredicted RBP29.32■■■□□ 2.28
CWC15-204ENST00000542907 DNMBPQ6XZF7 1577 aa29.3■■■□□ 2.28
CWC15-204ENST00000542907 POLA1P09884 1462 aaPredicted RBP29.13■■■□□ 2.25
CWC15-204ENST00000542907 AQRO60306 1485 aaKnown RBP eCLIP29.12■■■□□ 2.251e-6■■■■□ 20
CWC15-204ENST00000542907 EIF4G3O43432 1585 aaKnown RBP29.12■■■□□ 2.25
CWC15-204ENST00000542907 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
CWC15-204ENST00000542907 SUPT5HO00267 1087 aaKnown RBP29.09■■■□□ 2.25
CWC15-204ENST00000542907 SOGA1O94964 1423 aa29.07■■■□□ 2.24
CWC15-204ENST00000542907 RAD54L2Q9Y4B4 1467 aa29.03■■■□□ 2.24
CWC15-204ENST00000542907 FBLN2P98095 1184 aa29.01■■■□□ 2.23
CWC15-204ENST00000542907 TDRD9Q8NDG6 1382 aaKnown RBP28.99■■■□□ 2.23
CWC15-204ENST00000542907 FGD5Q6ZNL6 1462 aa28.97■■■□□ 2.23
CWC15-204ENST00000542907 RIMBP3CA6NJZ7 1639 aa28.93■■■□□ 2.22
CWC15-204ENST00000542907 RIMBP3BA6NNM3 1639 aa28.93■■■□□ 2.22
CWC15-204ENST00000542907 RIMBP3Q9UFD9 1639 aa28.93■■■□□ 2.22
CWC15-204ENST00000542907 CUX1P39880 1505 aa28.93■■■□□ 2.22
CWC15-204ENST00000542907 ARHGEF11O15085 1522 aa28.89■■■□□ 2.22
CWC15-204ENST00000542907 WDR97A6NE52 1622 aa28.87■■■□□ 2.21
CWC15-204ENST00000542907 CHD1O14646 1710 aa28.83■■■□□ 2.21
CWC15-204ENST00000542907 CHMP7Q8WUX9 453 aaPredicted RBP28.82■■■□□ 2.2
CWC15-204ENST00000542907 SNAPC4Q5SXM2 1469 aa28.8■■■□□ 2.2
CWC15-204ENST00000542907 CYB5RLQ6IPT4 315 aa28.8■■■□□ 2.2
CWC15-204ENST00000542907 GRIN2BQ13224 1484 aa28.78■■■□□ 2.2
CWC15-204ENST00000542907 MAGI1Q96QZ7 1491 aaPredicted RBP28.76■■■□□ 2.19
CWC15-204ENST00000542907 GAPVD1Q14C86 1478 aa28.7■■■□□ 2.18
CWC15-204ENST00000542907 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
CWC15-204ENST00000542907 ABCA10Q8WWZ4 1543 aa28.66■■■□□ 2.18
CWC15-204ENST00000542907 WRNQ14191 1432 aaPredicted RBP eCLIP28.63■■■□□ 2.17
CWC15-204ENST00000542907 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
CWC15-204ENST00000542907 ARAP1Q96P48 1450 aa28.61■■■□□ 2.17
CWC15-204ENST00000542907 CLASP1Q7Z460 1538 aa28.58■■■□□ 2.17
CWC15-204ENST00000542907 PBRM1Q86U86 1689 aa28.52■■■□□ 2.16
CWC15-204ENST00000542907 ABCA5Q8WWZ7 1642 aa28.52■■■□□ 2.16
CWC15-204ENST00000542907 TOP2BQ02880 1626 aa28.5■■■□□ 2.15
CWC15-204ENST00000542907 TRHP20396 242 aaPredicted RBP28.47■■■□□ 2.15
CWC15-204ENST00000542907 BIVM-ERCC5R4GMW8 1640 aa28.45■■■□□ 2.14
CWC15-204ENST00000542907 GRIN2AQ12879 1464 aa28.38■■■□□ 2.13
CWC15-204ENST00000542907 FHAD1B1AJZ9 1412 aa28.35■■■□□ 2.13
CWC15-204ENST00000542907 ADAMTS12P58397 1594 aa28.32■■■□□ 2.12
CWC15-204ENST00000542907 ERICH3Q5RHP9 1530 aa28.3■■■□□ 2.12
CWC15-204ENST00000542907 NUP160Q12769 1436 aa28.29■■■□□ 2.12
CWC15-204ENST00000542907 CEP170Q5SW79 1584 aa28.2■■■□□ 2.11
CWC15-204ENST00000542907 JPH4Q96JJ6 628 aa28.1■■■□□ 2.09
CWC15-204ENST00000542907 ERCC6L2Q5T890 1561 aa28.1■■■□□ 2.09
CWC15-204ENST00000542907 SHROOM2Q13796 1616 aa28.07■■■□□ 2.08
CWC15-204ENST00000542907 KIF27Q86VH2 1401 aa28.06■■■□□ 2.08
CWC15-204ENST00000542907 PRG4Q92954 1404 aaPredicted RBP28.04■■■□□ 2.08
CWC15-204ENST00000542907 IGF1RP08069 1367 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms