RNA–Protein interactions for RNA: ENST00000542868.1

GNB3-209, Transcript of G protein subunit beta 3, humanhuman

TSL 1 (best)

Gene GNB3, Length 616 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB3-209ENST00000542868 NISCHQ9Y2I1 1504 aa48.99■■■■■ 5.43
GNB3-209ENST00000542868 CCDC180Q9P1Z9 1646 aa43.93■■■■■ 4.62
GNB3-209ENST00000542868 ABCC9O60706 1549 aa43.24■■■■■ 4.51
GNB3-209ENST00000542868 RB1CC1Q8TDY2 1594 aa41.5■■■■■ 4.23
GNB3-209ENST00000542868 NACADO15069 1562 aa41.36■■■■■ 4.21
GNB3-209ENST00000542868 MYO15BQ96JP2 1530 aa41.03■■■■■ 4.16
GNB3-209ENST00000542868 DCAF8L2P0C7V8 631 aa40.8■■■■■ 4.12
GNB3-209ENST00000542868 ZCCHC6Q5VYS8 1495 aaKnown RBP40.75■■■■■ 4.11
GNB3-209ENST00000542868 UNC13AQ9UPW8 1703 aa40.64■■■■■ 4.1
GNB3-209ENST00000542868 DCAF1Q9Y4B6 1507 aa40.62■■■■■ 4.09
GNB3-209ENST00000542868 BICRAQ9NZM4 1560 aa40.29■■■■■ 4.04
GNB3-209ENST00000542868 PABPN1Q86U42 306 aaKnown RBP eCLIP40.21■■■■■ 4.03
GNB3-209ENST00000542868 DNAJC5BQ9UF47 199 aa40.11■■■■■ 4.01
GNB3-209ENST00000542868 SHROOM4Q9ULL8 1493 aa39.94■■■■□ 3.98
GNB3-209ENST00000542868 SCRIBQ14160 1630 aa39.87■■■■□ 3.97
GNB3-209ENST00000542868 EIF4G1Q04637 1599 aaKnown RBP39.25■■■■□ 3.87
GNB3-209ENST00000542868 CC2D2AQ9P2K1 1620 aa39.2■■■■□ 3.87
GNB3-209ENST00000542868 CECR2Q9BXF3 1484 aa38.97■■■■□ 3.83
GNB3-209ENST00000542868 SMARCA4P51532 1647 aa38.16■■■■□ 3.7
GNB3-209ENST00000542868 NCAPD3P42695 1498 aa38.13■■■■□ 3.69
GNB3-209ENST00000542868 ATAD2BQ9ULI0 1458 aa38.04■■■■□ 3.68
GNB3-209ENST00000542868 BAZ1AQ9NRL2 1556 aaPredicted RBP38.03■■■■□ 3.68
GNB3-209ENST00000542868 SMARCA2P51531 1590 aa38.02■■■■□ 3.68
GNB3-209ENST00000542868 HMGXB3Q12766 1538 aa37.97■■■■□ 3.67
GNB3-209ENST00000542868 PEG3Q9GZU2 1588 aa37.89■■■■□ 3.66
GNB3-209ENST00000542868 MROH2BQ7Z745 1585 aa37.71■■■■□ 3.63
GNB3-209ENST00000542868 BAZ1BQ9UIG0 1483 aaKnown RBP37.69■■■■□ 3.62
GNB3-209ENST00000542868 ERCC6Q03468 1493 aa37.33■■■■□ 3.57
GNB3-209ENST00000542868 NESP48681 1621 aa37.28■■■■□ 3.56
GNB3-209ENST00000542868 WIZO95785 1651 aa37.28■■■■□ 3.56
GNB3-209ENST00000542868 CUX2O14529 1486 aa37.26■■■■□ 3.56
GNB3-209ENST00000542868 LAMC3Q9Y6N6 1575 aa37.25■■■■□ 3.55
GNB3-209ENST00000542868 RSF1Q96T23 1441 aaPredicted RBP37.07■■■■□ 3.52
GNB3-209ENST00000542868 THOC2Q8NI27 1593 aaKnown RBP37■■■■□ 3.51
GNB3-209ENST00000542868 KIF21AQ7Z4S6 1674 aa36.95■■■■□ 3.51
GNB3-209ENST00000542868 CADPSQ9ULU8 1353 aa36.93■■■■□ 3.5
GNB3-209ENST00000542868 PDS5BQ9NTI5 1447 aa36.93■■■■□ 3.5
GNB3-209ENST00000542868 TOP2AP11388 1531 aaKnown RBP36.91■■■■□ 3.5
GNB3-209ENST00000542868 CFTRP13569 1480 aa36.66■■■■□ 3.46
GNB3-209ENST00000542868 MRC2Q9UBG0 1479 aa36.62■■■■□ 3.45
GNB3-209ENST00000542868 DNAJC5Q9H3Z4 198 aa36.59■■■■□ 3.45
GNB3-209ENST00000542868 WDR62O43379 1518 aa36.57■■■■□ 3.44
GNB3-209ENST00000542868 CEP164Q9UPV0 1460 aa36.54■■■■□ 3.44
GNB3-209ENST00000542868 FANCD2Q9BXW9 1451 aa36.51■■■■□ 3.44
GNB3-209ENST00000542868 PRDM2Q13029 1718 aa36.48■■■■□ 3.43
GNB3-209ENST00000542868 CCDC88BA6NC98 1476 aa36.39■■■■□ 3.42
GNB3-209ENST00000542868 URB2Q14146 1524 aaKnown RBP36.2■■■■□ 3.39
GNB3-209ENST00000542868 SUPT5HO00267 1087 aaKnown RBP35.98■■■■□ 3.35
GNB3-209ENST00000542868 TOPBP1Q92547 1522 aa35.9■■■■□ 3.34
GNB3-209ENST00000542868 ABCC8Q09428 1581 aa35.89■■■■□ 3.34
GNB3-209ENST00000542868 DNMBPQ6XZF7 1577 aa35.85■■■■□ 3.33
GNB3-209ENST00000542868 IFT140Q96RY7 1462 aa35.81■■■■□ 3.32
GNB3-209ENST00000542868 ZNF608Q9ULD9 1512 aaPredicted RBP35.63■■■■□ 3.29
GNB3-209ENST00000542868 TARBP1Q13395 1621 aaKnown RBP35.6■■■■□ 3.29
GNB3-209ENST00000542868 EIF4G3O43432 1585 aaKnown RBP35.57■■■■□ 3.28
GNB3-209ENST00000542868 POLA1P09884 1462 aaPredicted RBP35.55■■■■□ 3.28
GNB3-209ENST00000542868 OSCARQ8IYS5 282 aa35.44■■■■□ 3.26
GNB3-209ENST00000542868 CUX1P39880 1505 aa35.42■■■■□ 3.26
GNB3-209ENST00000542868 WDR97A6NE52 1622 aa35.39■■■■□ 3.26
GNB3-209ENST00000542868 FGD5Q6ZNL6 1462 aa35.37■■■■□ 3.25
GNB3-209ENST00000542868 AQRO60306 1485 aaKnown RBP eCLIP35.33■■■■□ 3.25
GNB3-209ENST00000542868 RAD54L2Q9Y4B4 1467 aa35.33■■■■□ 3.25
GNB3-209ENST00000542868 SOGA1O94964 1423 aa35.32■■■■□ 3.24
GNB3-209ENST00000542868 CHD1O14646 1710 aa35.23■■■■□ 3.23
GNB3-209ENST00000542868 TDRD9Q8NDG6 1382 aaKnown RBP35.14■■■■□ 3.22
GNB3-209ENST00000542868 RIMBP3CA6NJZ7 1639 aa35.07■■■■□ 3.21
GNB3-209ENST00000542868 RIMBP3BA6NNM3 1639 aa35.07■■■■□ 3.21
GNB3-209ENST00000542868 RIMBP3Q9UFD9 1639 aa35.07■■■■□ 3.21
GNB3-209ENST00000542868 BIVM-ERCC5R4GMW8 1640 aa35.06■■■■□ 3.2
GNB3-209ENST00000542868 ABCA10Q8WWZ4 1543 aa35.06■■■■□ 3.2
GNB3-209ENST00000542868 SNAPC4Q5SXM2 1469 aa35.05■■■■□ 3.2
GNB3-209ENST00000542868 MAGI1Q96QZ7 1491 aaPredicted RBP35.05■■■■□ 3.2
GNB3-209ENST00000542868 GRIN2BQ13224 1484 aa35.03■■■■□ 3.2
GNB3-209ENST00000542868 TOP2BQ02880 1626 aa35.03■■■■□ 3.2
GNB3-209ENST00000542868 PBRM1Q86U86 1689 aa35.01■■■■□ 3.2
GNB3-209ENST00000542868 TRIM41Q8WV44 630 aa35.01■■■■□ 3.2
GNB3-209ENST00000542868 ABCA5Q8WWZ7 1642 aa35.01■■■■□ 3.19
GNB3-209ENST00000542868 ARHGEF11O15085 1522 aa35■■■■□ 3.19
GNB3-209ENST00000542868 WRNQ14191 1432 aaPredicted RBP eCLIP34.97■■■■□ 3.19
GNB3-209ENST00000542868 GAPVD1Q14C86 1478 aa34.95■■■■□ 3.19
GNB3-209ENST00000542868 SYNJ1O43426 1573 aa34.95■■■■□ 3.18
GNB3-209ENST00000542868 SYNJ2O15056 1496 aa34.9■■■■□ 3.18
GNB3-209ENST00000542868 FBLN2P98095 1184 aa34.86■■■■□ 3.17
GNB3-209ENST00000542868 CLASP1Q7Z460 1538 aa34.86■■■■□ 3.17
GNB3-209ENST00000542868 CHMP7Q8WUX9 453 aaPredicted RBP34.77■■■■□ 3.16
GNB3-209ENST00000542868 ADAMTS12P58397 1594 aa34.7■■■■□ 3.14
GNB3-209ENST00000542868 ARAP1Q96P48 1450 aa34.68■■■■□ 3.14
GNB3-209ENST00000542868 ERICH3Q5RHP9 1530 aa34.65■■■■□ 3.14
GNB3-209ENST00000542868 GRIN2AQ12879 1464 aa34.6■■■■□ 3.13
GNB3-209ENST00000542868 FHAD1B1AJZ9 1412 aa34.55■■■■□ 3.12
GNB3-209ENST00000542868 NUP160Q12769 1436 aa34.51■■■■□ 3.12
GNB3-209ENST00000542868 CYB5RLQ6IPT4 315 aa34.51■■■■□ 3.12
GNB3-209ENST00000542868 CEP170Q5SW79 1584 aa34.47■■■■□ 3.11
GNB3-209ENST00000542868 SHROOM2Q13796 1616 aa34.37■■■■□ 3.09
GNB3-209ENST00000542868 KIF27Q86VH2 1401 aa34.27■■■■□ 3.08
GNB3-209ENST00000542868 CUL7Q14999 1698 aa34.25■■■■□ 3.07
GNB3-209ENST00000542868 ERCC6L2Q5T890 1561 aa34.23■■■■□ 3.07
GNB3-209ENST00000542868 RUSC2Q8N2Y8 1516 aa34.21■■■■□ 3.07
GNB3-209ENST00000542868 IGF1RP08069 1367 aa34.17■■■■□ 3.06
GNB3-209ENST00000542868 PRG4Q92954 1404 aaPredicted RBP34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms