RNA–Protein interactions for RNA: ENST00000542794.5

SDHAF2-207, Transcript of succinate dehydrogenase complex assembly factor 2, humanhuman

TSL 2

Gene SDHAF2, Length 1,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF2-207ENST00000542794 NISCHQ9Y2I1 1504 aa48.51■■■■■ 5.36
SDHAF2-207ENST00000542794 CCDC180Q9P1Z9 1646 aa43.45■■■■■ 4.55
SDHAF2-207ENST00000542794 ABCC9O60706 1549 aa43.12■■■■■ 4.49
SDHAF2-207ENST00000542794 RB1CC1Q8TDY2 1594 aa41.18■■■■■ 4.18
SDHAF2-207ENST00000542794 NACADO15069 1562 aa40.99■■■■■ 4.15
SDHAF2-207ENST00000542794 DCAF8L2P0C7V8 631 aa40.64■■■■■ 4.1
SDHAF2-207ENST00000542794 MYO15BQ96JP2 1530 aa40.56■■■■■ 4.08
SDHAF2-207ENST00000542794 UNC13AQ9UPW8 1703 aa40.3■■■■■ 4.04
SDHAF2-207ENST00000542794 ZCCHC6Q5VYS8 1495 aaKnown RBP40.3■■■■■ 4.04
SDHAF2-207ENST00000542794 DNAJC5BQ9UF47 199 aa40.2■■■■■ 4.03
SDHAF2-207ENST00000542794 DCAF1Q9Y4B6 1507 aa40.13■■■■■ 4.01
SDHAF2-207ENST00000542794 PABPN1Q86U42 306 aaKnown RBP eCLIP40.13■■■■■ 4.01
SDHAF2-207ENST00000542794 BICRAQ9NZM4 1560 aa40.03■■■■■ 4
SDHAF2-207ENST00000542794 SCRIBQ14160 1630 aa39.56■■■■□ 3.92
SDHAF2-207ENST00000542794 SHROOM4Q9ULL8 1493 aa39.53■■■■□ 3.92
SDHAF2-207ENST00000542794 CC2D2AQ9P2K1 1620 aa39■■■■□ 3.83
SDHAF2-207ENST00000542794 EIF4G1Q04637 1599 aaKnown RBP38.99■■■■□ 3.83
SDHAF2-207ENST00000542794 CECR2Q9BXF3 1484 aa38.82■■■■□ 3.81
SDHAF2-207ENST00000542794 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
SDHAF2-207ENST00000542794 SMARCA4P51532 1647 aa37.8■■■■□ 3.64
SDHAF2-207ENST00000542794 ATAD2BQ9ULI0 1458 aa37.76■■■■□ 3.63
SDHAF2-207ENST00000542794 SMARCA2P51531 1590 aa37.66■■■■□ 3.62
SDHAF2-207ENST00000542794 BAZ1AQ9NRL2 1556 aaPredicted RBP37.63■■■■□ 3.62
SDHAF2-207ENST00000542794 HMGXB3Q12766 1538 aa37.61■■■■□ 3.61
SDHAF2-207ENST00000542794 PEG3Q9GZU2 1588 aa37.46■■■■□ 3.59
SDHAF2-207ENST00000542794 MROH2BQ7Z745 1585 aa37.38■■■■□ 3.58
SDHAF2-207ENST00000542794 BAZ1BQ9UIG0 1483 aaKnown RBP37.38■■■■□ 3.57
SDHAF2-207ENST00000542794 ERCC6Q03468 1493 aa37.18■■■■□ 3.54
SDHAF2-207ENST00000542794 NESP48681 1621 aa37.14■■■■□ 3.54
SDHAF2-207ENST00000542794 CUX2O14529 1486 aa37.08■■■■□ 3.53
SDHAF2-207ENST00000542794 LAMC3Q9Y6N6 1575 aa36.94■■■■□ 3.5
SDHAF2-207ENST00000542794 WIZO95785 1651 aa36.93■■■■□ 3.5
SDHAF2-207ENST00000542794 THOC2Q8NI27 1593 aaKnown RBP36.76■■■■□ 3.48
SDHAF2-207ENST00000542794 DNAJC5Q9H3Z4 198 aa36.71■■■■□ 3.47
SDHAF2-207ENST00000542794 RSF1Q96T23 1441 aaPredicted RBP36.7■■■■□ 3.47
SDHAF2-207ENST00000542794 KIF21AQ7Z4S6 1674 aa36.69■■■■□ 3.46
SDHAF2-207ENST00000542794 PDS5BQ9NTI5 1447 aa36.67■■■■□ 3.46
SDHAF2-207ENST00000542794 CADPSQ9ULU8 1353 aa36.66■■■■□ 3.46
SDHAF2-207ENST00000542794 TOP2AP11388 1531 aaKnown RBP36.51■■■■□ 3.44
SDHAF2-207ENST00000542794 MRC2Q9UBG0 1479 aa36.37■■■■□ 3.41
SDHAF2-207ENST00000542794 CFTRP13569 1480 aa36.34■■■■□ 3.41
SDHAF2-207ENST00000542794 WDR62O43379 1518 aa36.31■■■■□ 3.4
SDHAF2-207ENST00000542794 CEP164Q9UPV0 1460 aa36.27■■■■□ 3.4
SDHAF2-207ENST00000542794 FANCD2Q9BXW9 1451 aa36.25■■■■□ 3.39
SDHAF2-207ENST00000542794 CCDC88BA6NC98 1476 aa36.05■■■■□ 3.36
SDHAF2-207ENST00000542794 PRDM2Q13029 1718 aa36.03■■■■□ 3.36
SDHAF2-207ENST00000542794 URB2Q14146 1524 aaKnown RBP35.97■■■■□ 3.35
SDHAF2-207ENST00000542794 TOPBP1Q92547 1522 aa35.62■■■■□ 3.29
SDHAF2-207ENST00000542794 IFT140Q96RY7 1462 aa35.54■■■■□ 3.28
SDHAF2-207ENST00000542794 ABCC8Q09428 1581 aa35.53■■■■□ 3.28
SDHAF2-207ENST00000542794 DNMBPQ6XZF7 1577 aa35.52■■■■□ 3.28
SDHAF2-207ENST00000542794 ZNF608Q9ULD9 1512 aaPredicted RBP35.47■■■■□ 3.27
SDHAF2-207ENST00000542794 OSCARQ8IYS5 282 aa35.35■■■■□ 3.25
SDHAF2-207ENST00000542794 TARBP1Q13395 1621 aaKnown RBP35.31■■■■□ 3.24
SDHAF2-207ENST00000542794 EIF4G3O43432 1585 aaKnown RBP35.3■■■■□ 3.24
SDHAF2-207ENST00000542794 POLA1P09884 1462 aaPredicted RBP35.28■■■■□ 3.24
SDHAF2-207ENST00000542794 AQRO60306 1485 aaKnown RBP eCLIP35.15■■■■□ 3.225e-6■■□□□ 14.3
SDHAF2-207ENST00000542794 SUPT5HO00267 1087 aaKnown RBP35.14■■■■□ 3.22
SDHAF2-207ENST00000542794 TRIM41Q8WV44 630 aa35.13■■■■□ 3.21
SDHAF2-207ENST00000542794 CUX1P39880 1505 aa35.11■■■■□ 3.21
SDHAF2-207ENST00000542794 RAD54L2Q9Y4B4 1467 aa35.11■■■■□ 3.21
SDHAF2-207ENST00000542794 FGD5Q6ZNL6 1462 aa35.09■■■■□ 3.21
SDHAF2-207ENST00000542794 SOGA1O94964 1423 aa35.06■■■■□ 3.2
SDHAF2-207ENST00000542794 CHD1O14646 1710 aa34.98■■■■□ 3.19
SDHAF2-207ENST00000542794 WDR97A6NE52 1622 aa34.97■■■■□ 3.19
SDHAF2-207ENST00000542794 TDRD9Q8NDG6 1382 aaKnown RBP34.97■■■■□ 3.19
SDHAF2-207ENST00000542794 RIMBP3CA6NJZ7 1639 aa34.94■■■■□ 3.18
SDHAF2-207ENST00000542794 RIMBP3BA6NNM3 1639 aa34.94■■■■□ 3.18
SDHAF2-207ENST00000542794 RIMBP3Q9UFD9 1639 aa34.94■■■■□ 3.18
SDHAF2-207ENST00000542794 ARHGEF11O15085 1522 aa34.86■■■■□ 3.17
SDHAF2-207ENST00000542794 SNAPC4Q5SXM2 1469 aa34.83■■■■□ 3.17
SDHAF2-207ENST00000542794 GRIN2BQ13224 1484 aa34.77■■■■□ 3.16
SDHAF2-207ENST00000542794 FBLN2P98095 1184 aa34.76■■■■□ 3.16
SDHAF2-207ENST00000542794 MAGI1Q96QZ7 1491 aaPredicted RBP34.76■■■■□ 3.15
SDHAF2-207ENST00000542794 ABCA10Q8WWZ4 1543 aa34.71■■■■□ 3.15
SDHAF2-207ENST00000542794 PBRM1Q86U86 1689 aa34.67■■■■□ 3.14
SDHAF2-207ENST00000542794 GAPVD1Q14C86 1478 aa34.67■■■■□ 3.14
SDHAF2-207ENST00000542794 ABCA5Q8WWZ7 1642 aa34.66■■■■□ 3.14
SDHAF2-207ENST00000542794 BIVM-ERCC5R4GMW8 1640 aa34.63■■■■□ 3.13
SDHAF2-207ENST00000542794 SYNJ2O15056 1496 aa34.63■■■■□ 3.13
SDHAF2-207ENST00000542794 TOP2BQ02880 1626 aa34.63■■■■□ 3.13
SDHAF2-207ENST00000542794 CLASP1Q7Z460 1538 aa34.62■■■■□ 3.13
SDHAF2-207ENST00000542794 WRNQ14191 1432 aaPredicted RBP eCLIP34.6■■■■□ 3.13
SDHAF2-207ENST00000542794 SYNJ1O43426 1573 aa34.59■■■■□ 3.13
SDHAF2-207ENST00000542794 CHMP7Q8WUX9 453 aaPredicted RBP34.58■■■■□ 3.13
SDHAF2-207ENST00000542794 ARAP1Q96P48 1450 aa34.56■■■■□ 3.12
SDHAF2-207ENST00000542794 CYB5RLQ6IPT4 315 aa34.49■■■■□ 3.11
SDHAF2-207ENST00000542794 ADAMTS12P58397 1594 aa34.38■■■■□ 3.09
SDHAF2-207ENST00000542794 GRIN2AQ12879 1464 aa34.33■■■■□ 3.09
SDHAF2-207ENST00000542794 ERICH3Q5RHP9 1530 aa34.28■■■■□ 3.08
SDHAF2-207ENST00000542794 FHAD1B1AJZ9 1412 aa34.24■■■■□ 3.07
SDHAF2-207ENST00000542794 NUP160Q12769 1436 aa34.23■■■■□ 3.07
SDHAF2-207ENST00000542794 CEP170Q5SW79 1584 aa34.21■■■■□ 3.07
SDHAF2-207ENST00000542794 ERCC6L2Q5T890 1561 aa34.08■■■■□ 3.05
SDHAF2-207ENST00000542794 SHROOM2Q13796 1616 aa34.07■■■■□ 3.04
SDHAF2-207ENST00000542794 TRHP20396 242 aaPredicted RBP33.98■■■■□ 3.03
SDHAF2-207ENST00000542794 KIF27Q86VH2 1401 aa33.91■■■■□ 3.02
SDHAF2-207ENST00000542794 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
SDHAF2-207ENST00000542794 IGF1RP08069 1367 aa33.87■■■■□ 3.01
SDHAF2-207ENST00000542794 CUL7Q14999 1698 aa33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms