RNA–Protein interactions for RNA: ENST00000542766.5

IFT43-203, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-203ENST00000542766 NISCHQ9Y2I1 1504 aa52.25■■■■■ 5.96
IFT43-203ENST00000542766 CCDC180Q9P1Z9 1646 aa46.87■■■■■ 5.09
IFT43-203ENST00000542766 ABCC9O60706 1549 aa46.72■■■■■ 5.07
IFT43-203ENST00000542766 RB1CC1Q8TDY2 1594 aa44.48■■■■■ 4.71
IFT43-203ENST00000542766 NACADO15069 1562 aa44.21■■■■■ 4.67
IFT43-203ENST00000542766 DCAF8L2P0C7V8 631 aa43.95■■■■■ 4.63
IFT43-203ENST00000542766 DNAJC5BQ9UF47 199 aa43.77■■■■■ 4.6
IFT43-203ENST00000542766 UNC13AQ9UPW8 1703 aa43.73■■■■■ 4.59
IFT43-203ENST00000542766 MYO15BQ96JP2 1530 aa43.63■■■■■ 4.57
IFT43-203ENST00000542766 PABPN1Q86U42 306 aaKnown RBP eCLIP43.49■■■■■ 4.55
IFT43-203ENST00000542766 ZCCHC6Q5VYS8 1495 aaKnown RBP43.35■■■■■ 4.53
IFT43-203ENST00000542766 BICRAQ9NZM4 1560 aa43.32■■■■■ 4.52
IFT43-203ENST00000542766 DCAF1Q9Y4B6 1507 aa43.13■■■■■ 4.5
IFT43-203ENST00000542766 SCRIBQ14160 1630 aa42.74■■■■■ 4.43
IFT43-203ENST00000542766 SHROOM4Q9ULL8 1493 aa42.55■■■■■ 4.4
IFT43-203ENST00000542766 CC2D2AQ9P2K1 1620 aa42.25■■■■■ 4.35
IFT43-203ENST00000542766 EIF4G1Q04637 1599 aaKnown RBP42.17■■■■■ 4.34
IFT43-203ENST00000542766 CECR2Q9BXF3 1484 aa42.04■■■■■ 4.32
IFT43-203ENST00000542766 NCAPD3P42695 1498 aa40.81■■■■■ 4.12
IFT43-203ENST00000542766 SMARCA4P51532 1647 aa40.78■■■■■ 4.12
IFT43-203ENST00000542766 ATAD2BQ9ULI0 1458 aa40.73■■■■■ 4.11
IFT43-203ENST00000542766 SMARCA2P51531 1590 aa40.59■■■■■ 4.09
IFT43-203ENST00000542766 HMGXB3Q12766 1538 aa40.54■■■■■ 4.08
IFT43-203ENST00000542766 BAZ1AQ9NRL2 1556 aaPredicted RBP40.52■■■■■ 4.08
IFT43-203ENST00000542766 PEG3Q9GZU2 1588 aa40.35■■■■■ 4.05
IFT43-203ENST00000542766 BAZ1BQ9UIG0 1483 aaKnown RBP40.32■■■■■ 4.04
IFT43-203ENST00000542766 MROH2BQ7Z745 1585 aa40.31■■■■■ 4.04
IFT43-203ENST00000542766 ERCC6Q03468 1493 aa40.25■■■■■ 4.03
IFT43-203ENST00000542766 NESP48681 1621 aa40.23■■■■■ 4.03
IFT43-203ENST00000542766 CUX2O14529 1486 aa40.14■■■■■ 4.02
IFT43-203ENST00000542766 DNAJC5Q9H3Z4 198 aa39.98■■■■□ 3.99
IFT43-203ENST00000542766 WIZO95785 1651 aa39.89■■■■□ 3.98
IFT43-203ENST00000542766 LAMC3Q9Y6N6 1575 aa39.89■■■■□ 3.98
IFT43-203ENST00000542766 THOC2Q8NI27 1593 aaKnown RBP39.8■■■■□ 3.96
IFT43-203ENST00000542766 KIF21AQ7Z4S6 1674 aa39.77■■■■□ 3.96
IFT43-203ENST00000542766 PDS5BQ9NTI5 1447 aa39.57■■■■□ 3.92
IFT43-203ENST00000542766 CADPSQ9ULU8 1353 aa39.55■■■■□ 3.92
IFT43-203ENST00000542766 RSF1Q96T23 1441 aaPredicted RBP39.48■■■■□ 3.91
IFT43-203ENST00000542766 TOP2AP11388 1531 aaKnown RBP39.3■■■■□ 3.88
IFT43-203ENST00000542766 MRC2Q9UBG0 1479 aa39.29■■■■□ 3.88
IFT43-203ENST00000542766 WDR62O43379 1518 aa39.23■■■■□ 3.87
IFT43-203ENST00000542766 CFTRP13569 1480 aa39.17■■■■□ 3.86
IFT43-203ENST00000542766 CEP164Q9UPV0 1460 aa39.15■■■■□ 3.86
IFT43-203ENST00000542766 FANCD2Q9BXW9 1451 aa39.14■■■■□ 3.86
IFT43-203ENST00000542766 PRDM2Q13029 1718 aa38.94■■■■□ 3.82
IFT43-203ENST00000542766 URB2Q14146 1524 aaKnown RBP38.87■■■■□ 3.81
IFT43-203ENST00000542766 CCDC88BA6NC98 1476 aa38.86■■■■□ 3.81
IFT43-203ENST00000542766 TOPBP1Q92547 1522 aa38.44■■■■□ 3.74
IFT43-203ENST00000542766 ZNF608Q9ULD9 1512 aaPredicted RBP38.37■■■■□ 3.73
IFT43-203ENST00000542766 IFT140Q96RY7 1462 aa38.35■■■■□ 3.73
IFT43-203ENST00000542766 DNMBPQ6XZF7 1577 aa38.31■■■■□ 3.72
IFT43-203ENST00000542766 OSCARQ8IYS5 282 aa38.28■■■■□ 3.72
IFT43-203ENST00000542766 TRIM41Q8WV44 630 aa38.27■■■■□ 3.72
IFT43-203ENST00000542766 ABCC8Q09428 1581 aa38.26■■■■□ 3.72
IFT43-203ENST00000542766 EIF4G3O43432 1585 aaKnown RBP38.18■■■■□ 3.7
IFT43-203ENST00000542766 TARBP1Q13395 1621 aaKnown RBP38.15■■■■□ 3.7
IFT43-203ENST00000542766 POLA1P09884 1462 aaPredicted RBP38.06■■■■□ 3.68
IFT43-203ENST00000542766 AQRO60306 1485 aaKnown RBP eCLIP38■■■■□ 3.67
IFT43-203ENST00000542766 CHD1O14646 1710 aa37.94■■■■□ 3.66
IFT43-203ENST00000542766 RAD54L2Q9Y4B4 1467 aa37.94■■■■□ 3.66
IFT43-203ENST00000542766 RIMBP3CA6NJZ7 1639 aa37.94■■■■□ 3.66
IFT43-203ENST00000542766 RIMBP3BA6NNM3 1639 aa37.94■■■■□ 3.66
IFT43-203ENST00000542766 RIMBP3Q9UFD9 1639 aa37.94■■■■□ 3.66
IFT43-203ENST00000542766 CUX1P39880 1505 aa37.86■■■■□ 3.65
IFT43-203ENST00000542766 FGD5Q6ZNL6 1462 aa37.84■■■■□ 3.65
IFT43-203ENST00000542766 SOGA1O94964 1423 aa37.83■■■■□ 3.65
IFT43-203ENST00000542766 ARHGEF11O15085 1522 aa37.78■■■■□ 3.64
IFT43-203ENST00000542766 SUPT5HO00267 1087 aaKnown RBP37.78■■■■□ 3.64
IFT43-203ENST00000542766 TDRD9Q8NDG6 1382 aaKnown RBP37.78■■■■□ 3.64
IFT43-203ENST00000542766 WDR97A6NE52 1622 aa37.66■■■■□ 3.62
IFT43-203ENST00000542766 FBLN2P98095 1184 aa37.63■■■■□ 3.61
IFT43-203ENST00000542766 SNAPC4Q5SXM2 1469 aa37.61■■■■□ 3.61
IFT43-203ENST00000542766 PBRM1Q86U86 1689 aa37.5■■■■□ 3.59
IFT43-203ENST00000542766 GRIN2BQ13224 1484 aa37.48■■■■□ 3.59
IFT43-203ENST00000542766 MAGI1Q96QZ7 1491 aaPredicted RBP37.47■■■■□ 3.59
IFT43-203ENST00000542766 ARAP1Q96P48 1450 aa37.44■■■■□ 3.58
IFT43-203ENST00000542766 CLASP1Q7Z460 1538 aa37.43■■■■□ 3.58
IFT43-203ENST00000542766 CYB5RLQ6IPT4 315 aa37.42■■■■□ 3.58
IFT43-203ENST00000542766 ABCA5Q8WWZ7 1642 aa37.39■■■■□ 3.58
IFT43-203ENST00000542766 ABCA10Q8WWZ4 1543 aa37.39■■■■□ 3.58
IFT43-203ENST00000542766 GAPVD1Q14C86 1478 aa37.39■■■■□ 3.58
IFT43-203ENST00000542766 CHMP7Q8WUX9 453 aaPredicted RBP37.36■■■■□ 3.57
IFT43-203ENST00000542766 SYNJ2O15056 1496 aa37.36■■■■□ 3.57
IFT43-203ENST00000542766 SYNJ1O43426 1573 aa37.34■■■■□ 3.57
IFT43-203ENST00000542766 BIVM-ERCC5R4GMW8 1640 aa37.31■■■■□ 3.56
IFT43-203ENST00000542766 TOP2BQ02880 1626 aa37.28■■■■□ 3.56
IFT43-203ENST00000542766 WRNQ14191 1432 aaPredicted RBP eCLIP37.2■■■■□ 3.55
IFT43-203ENST00000542766 ADAMTS12P58397 1594 aa37.08■■■■□ 3.53
IFT43-203ENST00000542766 GRIN2AQ12879 1464 aa37.04■■■■□ 3.52
IFT43-203ENST00000542766 CEP170Q5SW79 1584 aa36.97■■■■□ 3.51
IFT43-203ENST00000542766 ERCC6L2Q5T890 1561 aa36.92■■■■□ 3.5
IFT43-203ENST00000542766 TRHP20396 242 aaPredicted RBP36.92■■■■□ 3.5
IFT43-203ENST00000542766 ERICH3Q5RHP9 1530 aa36.91■■■■□ 3.5
IFT43-203ENST00000542766 NUP160Q12769 1436 aa36.91■■■■□ 3.5
IFT43-203ENST00000542766 FHAD1B1AJZ9 1412 aa36.89■■■■□ 3.5
IFT43-203ENST00000542766 SHROOM2Q13796 1616 aa36.81■■■■□ 3.48
IFT43-203ENST00000542766 RUSC2Q8N2Y8 1516 aa36.57■■■■□ 3.44
IFT43-203ENST00000542766 PRG4Q92954 1404 aaPredicted RBP36.52■■■■□ 3.44
IFT43-203ENST00000542766 JPH4Q96JJ6 628 aa36.48■■■■□ 3.43
IFT43-203ENST00000542766 IGF1RP08069 1367 aa36.47■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms