RNA–Protein interactions for RNA: ENST00000542761.5

PTPN6-218, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-218ENST00000542761 NISCHQ9Y2I1 1504 aa41.63■■■■■ 4.25
PTPN6-218ENST00000542761 CCDC180Q9P1Z9 1646 aa37.18■■■■□ 3.54
PTPN6-218ENST00000542761 ABCC9O60706 1549 aa36.72■■■■□ 3.47
PTPN6-218ENST00000542761 RB1CC1Q8TDY2 1594 aa35.14■■■■□ 3.22
PTPN6-218ENST00000542761 NACADO15069 1562 aa35■■■■□ 3.19
PTPN6-218ENST00000542761 DCAF8L2P0C7V8 631 aa34.92■■■■□ 3.18
PTPN6-218ENST00000542761 MYO15BQ96JP2 1530 aa34.63■■■■□ 3.13
PTPN6-218ENST00000542761 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
PTPN6-218ENST00000542761 UNC13AQ9UPW8 1703 aa34.41■■■■□ 3.1
PTPN6-218ENST00000542761 DCAF1Q9Y4B6 1507 aa34.39■■■■□ 3.1
PTPN6-218ENST00000542761 PABPN1Q86U42 306 aaKnown RBP eCLIP34.24■■■■□ 3.07
PTPN6-218ENST00000542761 BICRAQ9NZM4 1560 aa34.11■■■■□ 3.05
PTPN6-218ENST00000542761 DNAJC5BQ9UF47 199 aa33.98■■■■□ 3.03
PTPN6-218ENST00000542761 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
PTPN6-218ENST00000542761 SHROOM4Q9ULL8 1493 aa33.65■■■□□ 2.98
PTPN6-218ENST00000542761 EIF4G1Q04637 1599 aaKnown RBP33.24■■■□□ 2.91
PTPN6-218ENST00000542761 CC2D2AQ9P2K1 1620 aa33.2■■■□□ 2.9
PTPN6-218ENST00000542761 CECR2Q9BXF3 1484 aa33■■■□□ 2.87
PTPN6-218ENST00000542761 SMARCA4P51532 1647 aa32.4■■■□□ 2.78
PTPN6-218ENST00000542761 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
PTPN6-218ENST00000542761 NCAPD3P42695 1498 aa32.28■■■□□ 2.76
PTPN6-218ENST00000542761 ATAD2BQ9ULI0 1458 aa32.28■■■□□ 2.76
PTPN6-218ENST00000542761 SMARCA2P51531 1590 aa32.22■■■□□ 2.75
PTPN6-218ENST00000542761 HMGXB3Q12766 1538 aa32.12■■■□□ 2.73
PTPN6-218ENST00000542761 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
PTPN6-218ENST00000542761 PEG3Q9GZU2 1588 aa32.05■■■□□ 2.72
PTPN6-218ENST00000542761 BAZ1BQ9UIG0 1483 aaKnown RBP32.01■■■□□ 2.71
PTPN6-218ENST00000542761 WIZO95785 1651 aa31.76■■■□□ 2.68
PTPN6-218ENST00000542761 NESP48681 1621 aa31.69■■■□□ 2.66
PTPN6-218ENST00000542761 ERCC6Q03468 1493 aa31.66■■■□□ 2.66
PTPN6-218ENST00000542761 RSF1Q96T23 1441 aaPredicted RBP31.58■■■□□ 2.65
PTPN6-218ENST00000542761 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.64
PTPN6-218ENST00000542761 CUX2O14529 1486 aa31.41■■■□□ 2.62
PTPN6-218ENST00000542761 TOP2AP11388 1531 aaKnown RBP31.38■■■□□ 2.61
PTPN6-218ENST00000542761 KIF21AQ7Z4S6 1674 aa31.33■■■□□ 2.61
PTPN6-218ENST00000542761 CADPSQ9ULU8 1353 aa31.32■■■□□ 2.6
PTPN6-218ENST00000542761 PDS5BQ9NTI5 1447 aa31.29■■■□□ 2.6
PTPN6-218ENST00000542761 THOC2Q8NI27 1593 aaKnown RBP31.28■■■□□ 2.6
PTPN6-218ENST00000542761 CFTRP13569 1480 aa31.08■■■□□ 2.57
PTPN6-218ENST00000542761 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
PTPN6-218ENST00000542761 FANCD2Q9BXW9 1451 aa31.01■■■□□ 2.55
PTPN6-218ENST00000542761 CEP164Q9UPV0 1460 aa31.01■■■□□ 2.55
PTPN6-218ENST00000542761 CCDC88BA6NC98 1476 aa30.99■■■□□ 2.55
PTPN6-218ENST00000542761 WDR62O43379 1518 aa30.93■■■□□ 2.54
PTPN6-218ENST00000542761 PRDM2Q13029 1718 aa30.89■■■□□ 2.54
PTPN6-218ENST00000542761 DNAJC5Q9H3Z4 198 aa30.82■■■□□ 2.52
PTPN6-218ENST00000542761 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
PTPN6-218ENST00000542761 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
PTPN6-218ENST00000542761 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
PTPN6-218ENST00000542761 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
PTPN6-218ENST00000542761 ABCC8Q09428 1581 aa30.39■■■□□ 2.46
PTPN6-218ENST00000542761 IFT140Q96RY7 1462 aa30.34■■■□□ 2.45
PTPN6-218ENST00000542761 ZNF608Q9ULD9 1512 aaPredicted RBP30.28■■■□□ 2.44
PTPN6-218ENST00000542761 POLA1P09884 1462 aaPredicted RBP30.2■■■□□ 2.43
PTPN6-218ENST00000542761 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
PTPN6-218ENST00000542761 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
PTPN6-218ENST00000542761 CUX1P39880 1505 aa30.14■■■□□ 2.42
PTPN6-218ENST00000542761 FGD5Q6ZNL6 1462 aa30.09■■■□□ 2.41
PTPN6-218ENST00000542761 RAD54L2Q9Y4B4 1467 aa30.08■■■□□ 2.41
PTPN6-218ENST00000542761 AQRO60306 1485 aaKnown RBP eCLIP30.05■■■□□ 2.4
PTPN6-218ENST00000542761 SOGA1O94964 1423 aa30.04■■■□□ 2.4
PTPN6-218ENST00000542761 OSCARQ8IYS5 282 aa30.02■■■□□ 2.4
PTPN6-218ENST00000542761 TDRD9Q8NDG6 1382 aaKnown RBP29.93■■■□□ 2.38
PTPN6-218ENST00000542761 WDR97A6NE52 1622 aa29.88■■■□□ 2.37
PTPN6-218ENST00000542761 CHD1O14646 1710 aa29.87■■■□□ 2.37
PTPN6-218ENST00000542761 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
PTPN6-218ENST00000542761 BIVM-ERCC5R4GMW8 1640 aa29.79■■■□□ 2.36
PTPN6-218ENST00000542761 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
PTPN6-218ENST00000542761 SNAPC4Q5SXM2 1469 aa29.78■■■□□ 2.36
PTPN6-218ENST00000542761 TOP2BQ02880 1626 aa29.78■■■□□ 2.36
PTPN6-218ENST00000542761 FBLN2P98095 1184 aa29.75■■■□□ 2.35
PTPN6-218ENST00000542761 ABCA10Q8WWZ4 1543 aa29.75■■■□□ 2.35
PTPN6-218ENST00000542761 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
PTPN6-218ENST00000542761 TRIM41Q8WV44 630 aa29.73■■■□□ 2.35
PTPN6-218ENST00000542761 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
PTPN6-218ENST00000542761 GAPVD1Q14C86 1478 aa29.7■■■□□ 2.35
PTPN6-218ENST00000542761 ABCA5Q8WWZ7 1642 aa29.7■■■□□ 2.34
PTPN6-218ENST00000542761 MAGI1Q96QZ7 1491 aaPredicted RBP29.68■■■□□ 2.34
PTPN6-218ENST00000542761 RIMBP3CA6NJZ7 1639 aa29.67■■■□□ 2.34
PTPN6-218ENST00000542761 RIMBP3BA6NNM3 1639 aa29.67■■■□□ 2.34
PTPN6-218ENST00000542761 RIMBP3Q9UFD9 1639 aa29.67■■■□□ 2.34
PTPN6-218ENST00000542761 ARHGEF11O15085 1522 aa29.61■■■□□ 2.33
PTPN6-218ENST00000542761 SYNJ2O15056 1496 aa29.58■■■□□ 2.33
PTPN6-218ENST00000542761 CHMP7Q8WUX9 453 aaPredicted RBP29.58■■■□□ 2.33
PTPN6-218ENST00000542761 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
PTPN6-218ENST00000542761 ADAMTS12P58397 1594 aa29.45■■■□□ 2.31
PTPN6-218ENST00000542761 ERICH3Q5RHP9 1530 aa29.38■■■□□ 2.29
PTPN6-218ENST00000542761 GRIN2AQ12879 1464 aa29.37■■■□□ 2.29
PTPN6-218ENST00000542761 ARAP1Q96P48 1450 aa29.36■■■□□ 2.29
PTPN6-218ENST00000542761 FHAD1B1AJZ9 1412 aa29.33■■■□□ 2.29
PTPN6-218ENST00000542761 CYB5RLQ6IPT4 315 aa29.32■■■□□ 2.28
PTPN6-218ENST00000542761 CEP170Q5SW79 1584 aa29.26■■■□□ 2.28
PTPN6-218ENST00000542761 NUP160Q12769 1436 aa29.23■■■□□ 2.27
PTPN6-218ENST00000542761 KIF27Q86VH2 1401 aa29.18■■■□□ 2.26
PTPN6-218ENST00000542761 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
PTPN6-218ENST00000542761 IGF1RP08069 1367 aa29.09■■■□□ 2.25
PTPN6-218ENST00000542761 SHROOM2Q13796 1616 aa29.08■■■□□ 2.25
PTPN6-218ENST00000542761 CUL7Q14999 1698 aa29.08■■■□□ 2.25
PTPN6-218ENST00000542761 RUSC2Q8N2Y8 1516 aa29.03■■■□□ 2.24
PTPN6-218ENST00000542761 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms