RNA–Protein interactions for RNA: ENST00000542632.5

LINC00598-204, long intergenic non-protein coding RNA 598, humanhuman

TSL 5

Gene LINC00598, Length 1,973 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-204ENST00000542632 NISCHQ9Y2I1 1504 aa26.05■■□□□ 1.76
LINC00598-204ENST00000542632 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
LINC00598-204ENST00000542632 ZCCHC6Q5VYS8 1495 aaKnown RBP21.88■■□□□ 1.09
LINC00598-204ENST00000542632 ABCC9O60706 1549 aa21.65■■□□□ 1.06
LINC00598-204ENST00000542632 DCAF8L2P0C7V8 631 aa21.59■■□□□ 1.05
LINC00598-204ENST00000542632 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
LINC00598-204ENST00000542632 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
LINC00598-204ENST00000542632 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
LINC00598-204ENST00000542632 NACADO15069 1562 aa21.19■□□□□ 0.98
LINC00598-204ENST00000542632 RB1CC1Q8TDY2 1594 aa21.05■□□□□ 0.96
LINC00598-204ENST00000542632 SCRIBQ14160 1630 aa20.99■□□□□ 0.95
LINC00598-204ENST00000542632 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
LINC00598-204ENST00000542632 BICRAQ9NZM4 1560 aa20.45■□□□□ 0.87
LINC00598-204ENST00000542632 SUPT5HO00267 1087 aaKnown RBP20.41■□□□□ 0.86
LINC00598-204ENST00000542632 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
LINC00598-204ENST00000542632 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
LINC00598-204ENST00000542632 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
LINC00598-204ENST00000542632 MROH2BQ7Z745 1585 aa20.16■□□□□ 0.82
LINC00598-204ENST00000542632 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
LINC00598-204ENST00000542632 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
LINC00598-204ENST00000542632 WIZO95785 1651 aa20.01■□□□□ 0.79
LINC00598-204ENST00000542632 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.77
LINC00598-204ENST00000542632 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
LINC00598-204ENST00000542632 TOP2AP11388 1531 aaKnown RBP19.75■□□□□ 0.75
LINC00598-204ENST00000542632 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
LINC00598-204ENST00000542632 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
LINC00598-204ENST00000542632 BAZ1BQ9UIG0 1483 aaKnown RBP19.63■□□□□ 0.73
LINC00598-204ENST00000542632 CC2D2AQ9P2K1 1620 aa19.57■□□□□ 0.72
LINC00598-204ENST00000542632 CCDC88BA6NC98 1476 aa19.56■□□□□ 0.72
LINC00598-204ENST00000542632 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
LINC00598-204ENST00000542632 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
LINC00598-204ENST00000542632 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
LINC00598-204ENST00000542632 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
LINC00598-204ENST00000542632 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
LINC00598-204ENST00000542632 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
LINC00598-204ENST00000542632 CFTRP13569 1480 aa19.11■□□□□ 0.65
LINC00598-204ENST00000542632 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
LINC00598-204ENST00000542632 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
LINC00598-204ENST00000542632 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
LINC00598-204ENST00000542632 NESP48681 1621 aa18.99■□□□□ 0.63
LINC00598-204ENST00000542632 SYNJ1O43426 1573 aa18.97■□□□□ 0.63
LINC00598-204ENST00000542632 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
LINC00598-204ENST00000542632 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
LINC00598-204ENST00000542632 FAM9AQ8IZU1 332 aaPredicted RBP18.86■□□□□ 0.61
LINC00598-204ENST00000542632 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
LINC00598-204ENST00000542632 CUX1P39880 1505 aa18.85■□□□□ 0.61
LINC00598-204ENST00000542632 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
LINC00598-204ENST00000542632 SOGA1O94964 1423 aa18.77■□□□□ 0.6
LINC00598-204ENST00000542632 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.6
LINC00598-204ENST00000542632 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
LINC00598-204ENST00000542632 PDS5BQ9NTI5 1447 aa18.75■□□□□ 0.59
LINC00598-204ENST00000542632 LOC105371045A0A1W2PR82 267 aa18.75■□□□□ 0.59
LINC00598-204ENST00000542632 RUSC2Q8N2Y8 1516 aa18.73■□□□□ 0.59
LINC00598-204ENST00000542632 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
LINC00598-204ENST00000542632 TOPBP1Q92547 1522 aa18.67■□□□□ 0.58
LINC00598-204ENST00000542632 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
LINC00598-204ENST00000542632 EHMT2Q96KQ7 1210 aa18.66■□□□□ 0.58
LINC00598-204ENST00000542632 FGD5Q6ZNL6 1462 aa18.66■□□□□ 0.58
LINC00598-204ENST00000542632 EEA1Q15075 1411 aa18.62■□□□□ 0.57
LINC00598-204ENST00000542632 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
LINC00598-204ENST00000542632 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
LINC00598-204ENST00000542632 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
LINC00598-204ENST00000542632 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
LINC00598-204ENST00000542632 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
LINC00598-204ENST00000542632 CUX2O14529 1486 aa18.52■□□□□ 0.55
LINC00598-204ENST00000542632 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
LINC00598-204ENST00000542632 WDR62O43379 1518 aa18.46■□□□□ 0.55
LINC00598-204ENST00000542632 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
LINC00598-204ENST00000542632 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
LINC00598-204ENST00000542632 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
LINC00598-204ENST00000542632 KIF21BO75037 1637 aa18.45■□□□□ 0.54
LINC00598-204ENST00000542632 GOLGA3Q08378 1498 aa18.42■□□□□ 0.54
LINC00598-204ENST00000542632 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
LINC00598-204ENST00000542632 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.53
LINC00598-204ENST00000542632 PRXQ9BXM0 1461 aa18.37■□□□□ 0.53
LINC00598-204ENST00000542632 IGF1RP08069 1367 aa18.36■□□□□ 0.53
LINC00598-204ENST00000542632 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
LINC00598-204ENST00000542632 UBTFP17480 764 aaKnown RBP18.35■□□□□ 0.53
LINC00598-204ENST00000542632 ABCA5Q8WWZ7 1642 aa18.35■□□□□ 0.53
LINC00598-204ENST00000542632 ERICH3Q5RHP9 1530 aa18.32■□□□□ 0.52
LINC00598-204ENST00000542632 TNIKQ9UKE5 1360 aa18.32■□□□□ 0.52
LINC00598-204ENST00000542632 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
LINC00598-204ENST00000542632 IFT140Q96RY7 1462 aa18.29■□□□□ 0.52
LINC00598-204ENST00000542632 CEP162Q5TB80 1403 aa18.26■□□□□ 0.51
LINC00598-204ENST00000542632 CARMIL1Q5VZK9 1371 aa18.26■□□□□ 0.51
LINC00598-204ENST00000542632 ZNF608Q9ULD9 1512 aaPredicted RBP18.26■□□□□ 0.51
LINC00598-204ENST00000542632 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.51
LINC00598-204ENST00000542632 PBRM1Q86U86 1689 aa18.24■□□□□ 0.51
LINC00598-204ENST00000542632 CUL7Q14999 1698 aa18.24■□□□□ 0.51
LINC00598-204ENST00000542632 EIF4G3O43432 1585 aaKnown RBP18.2■□□□□ 0.5
LINC00598-204ENST00000542632 RANGAP1P46060 587 aaPredicted RBP18.16■□□□□ 0.5
LINC00598-204ENST00000542632 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
LINC00598-204ENST00000542632 CLIP1P30622 1438 aa18.13■□□□□ 0.49
LINC00598-204ENST00000542632 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
LINC00598-204ENST00000542632 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
LINC00598-204ENST00000542632 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
LINC00598-204ENST00000542632 CTTNBP2Q8WZ74 1663 aa18.06■□□□□ 0.48
LINC00598-204ENST00000542632 MAGI1Q96QZ7 1491 aaPredicted RBP18■□□□□ 0.47
LINC00598-204ENST00000542632 ARHGAP35Q9NRY4 1499 aa17.99■□□□□ 0.47
LINC00598-204ENST00000542632 ARAP1Q96P48 1450 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms