RNA–Protein interactions for RNA: ENST00000542519.1

ZNF384-213, Transcript of zinc finger protein 384, humanhuman

TSL 1 (best)

Gene ZNF384, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF384-213ENST00000542519 NISCHQ9Y2I1 1504 aa37.25■■■■□ 3.55
ZNF384-213ENST00000542519 CCDC180Q9P1Z9 1646 aa33.51■■■□□ 2.96
ZNF384-213ENST00000542519 ABCC9O60706 1549 aa33.3■■■□□ 2.92
ZNF384-213ENST00000542519 RB1CC1Q8TDY2 1594 aa31.8■■■□□ 2.68
ZNF384-213ENST00000542519 NACADO15069 1562 aa31.61■■■□□ 2.65
ZNF384-213ENST00000542519 MYO15BQ96JP2 1530 aa31.26■■■□□ 2.59
ZNF384-213ENST00000542519 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
ZNF384-213ENST00000542519 UNC13AQ9UPW8 1703 aa31.19■■■□□ 2.58
ZNF384-213ENST00000542519 DCAF8L2P0C7V8 631 aa31.12■■■□□ 2.57
ZNF384-213ENST00000542519 BICRAQ9NZM4 1560 aa30.94■■■□□ 2.54
ZNF384-213ENST00000542519 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
ZNF384-213ENST00000542519 ZCCHC6Q5VYS8 1495 aaKnown RBP30.91■■■□□ 2.54
ZNF384-213ENST00000542519 DCAF1Q9Y4B6 1507 aa30.85■■■□□ 2.53
ZNF384-213ENST00000542519 SHROOM4Q9ULL8 1493 aa30.56■■■□□ 2.48
ZNF384-213ENST00000542519 SCRIBQ14160 1630 aa30.4■■■□□ 2.46
ZNF384-213ENST00000542519 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
ZNF384-213ENST00000542519 EIF4G1Q04637 1599 aaKnown RBP30.13■■■□□ 2.41
ZNF384-213ENST00000542519 CECR2Q9BXF3 1484 aa30.03■■■□□ 2.4
ZNF384-213ENST00000542519 NCAPD3P42695 1498 aa29.17■■■□□ 2.26
ZNF384-213ENST00000542519 SMARCA4P51532 1647 aa29.08■■■□□ 2.25
ZNF384-213ENST00000542519 ATAD2BQ9ULI0 1458 aa29.06■■■□□ 2.24
ZNF384-213ENST00000542519 SMARCA2P51531 1590 aa29.01■■■□□ 2.23
ZNF384-213ENST00000542519 HMGXB3Q12766 1538 aa29■■■□□ 2.23
ZNF384-213ENST00000542519 BAZ1AQ9NRL2 1556 aaPredicted RBP28.91■■■□□ 2.22
ZNF384-213ENST00000542519 PEG3Q9GZU2 1588 aa28.86■■■□□ 2.21
ZNF384-213ENST00000542519 CUX2O14529 1486 aa28.79■■■□□ 2.2
ZNF384-213ENST00000542519 BAZ1BQ9UIG0 1483 aaKnown RBP28.75■■■□□ 2.19
ZNF384-213ENST00000542519 ERCC6Q03468 1493 aa28.72■■■□□ 2.19
ZNF384-213ENST00000542519 MROH2BQ7Z745 1585 aa28.68■■■□□ 2.18
ZNF384-213ENST00000542519 DNAJC5Q9H3Z4 198 aa28.66■■■□□ 2.18
ZNF384-213ENST00000542519 NESP48681 1621 aa28.65■■■□□ 2.18
ZNF384-213ENST00000542519 LAMC3Q9Y6N6 1575 aa28.53■■■□□ 2.16
ZNF384-213ENST00000542519 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
ZNF384-213ENST00000542519 KIF21AQ7Z4S6 1674 aa28.36■■■□□ 2.13
ZNF384-213ENST00000542519 WIZO95785 1651 aa28.34■■■□□ 2.13
ZNF384-213ENST00000542519 PDS5BQ9NTI5 1447 aa28.27■■■□□ 2.12
ZNF384-213ENST00000542519 CADPSQ9ULU8 1353 aa28.23■■■□□ 2.11
ZNF384-213ENST00000542519 RSF1Q96T23 1441 aaPredicted RBP28.08■■■□□ 2.09
ZNF384-213ENST00000542519 MRC2Q9UBG0 1479 aa28.07■■■□□ 2.08
ZNF384-213ENST00000542519 WDR62O43379 1518 aa28.06■■■□□ 2.08
ZNF384-213ENST00000542519 TOP2AP11388 1531 aaKnown RBP28.01■■■□□ 2.07
ZNF384-213ENST00000542519 CFTRP13569 1480 aa27.96■■■□□ 2.07
ZNF384-213ENST00000542519 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.06
ZNF384-213ENST00000542519 FANCD2Q9BXW9 1451 aa27.91■■■□□ 2.06
ZNF384-213ENST00000542519 PRDM2Q13029 1718 aa27.79■■■□□ 2.04
ZNF384-213ENST00000542519 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
ZNF384-213ENST00000542519 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
ZNF384-213ENST00000542519 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
ZNF384-213ENST00000542519 IFT140Q96RY7 1462 aa27.4■■□□□ 1.98
ZNF384-213ENST00000542519 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
ZNF384-213ENST00000542519 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
ZNF384-213ENST00000542519 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
ZNF384-213ENST00000542519 DNMBPQ6XZF7 1577 aa27.34■■□□□ 1.97
ZNF384-213ENST00000542519 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
ZNF384-213ENST00000542519 EIF4G3O43432 1585 aaKnown RBP27.25■■□□□ 1.95
ZNF384-213ENST00000542519 TARBP1Q13395 1621 aaKnown RBP27.23■■□□□ 1.95
ZNF384-213ENST00000542519 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
ZNF384-213ENST00000542519 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
ZNF384-213ENST00000542519 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
ZNF384-213ENST00000542519 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
ZNF384-213ENST00000542519 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.921e-10■■■■■ 31.7
ZNF384-213ENST00000542519 CHD1O14646 1710 aa27.05■■□□□ 1.92
ZNF384-213ENST00000542519 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
ZNF384-213ENST00000542519 WDR97A6NE52 1622 aa26.99■■□□□ 1.91
ZNF384-213ENST00000542519 RAD54L2Q9Y4B4 1467 aa26.98■■□□□ 1.91
ZNF384-213ENST00000542519 CUX1P39880 1505 aa26.96■■□□□ 1.91
ZNF384-213ENST00000542519 FGD5Q6ZNL6 1462 aa26.94■■□□□ 1.9
ZNF384-213ENST00000542519 SOGA1O94964 1423 aa26.94■■□□□ 1.9
ZNF384-213ENST00000542519 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
ZNF384-213ENST00000542519 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
ZNF384-213ENST00000542519 MAGI1Q96QZ7 1491 aaPredicted RBP26.79■■□□□ 1.88
ZNF384-213ENST00000542519 CLASP1Q7Z460 1538 aa26.76■■□□□ 1.87
ZNF384-213ENST00000542519 GRIN2BQ13224 1484 aa26.75■■□□□ 1.87
ZNF384-213ENST00000542519 ARAP1Q96P48 1450 aa26.75■■□□□ 1.87
ZNF384-213ENST00000542519 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
ZNF384-213ENST00000542519 FBLN2P98095 1184 aa26.72■■□□□ 1.87
ZNF384-213ENST00000542519 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
ZNF384-213ENST00000542519 ABCA10Q8WWZ4 1543 aa26.69■■□□□ 1.86
ZNF384-213ENST00000542519 SYNJ1O43426 1573 aa26.68■■□□□ 1.86
ZNF384-213ENST00000542519 SYNJ2O15056 1496 aa26.68■■□□□ 1.86
ZNF384-213ENST00000542519 CYB5RLQ6IPT4 315 aa26.65■■□□□ 1.86
ZNF384-213ENST00000542519 GAPVD1Q14C86 1478 aa26.65■■□□□ 1.86
ZNF384-213ENST00000542519 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
ZNF384-213ENST00000542519 BIVM-ERCC5R4GMW8 1640 aa26.59■■□□□ 1.85
ZNF384-213ENST00000542519 CHMP7Q8WUX9 453 aaPredicted RBP26.59■■□□□ 1.85
ZNF384-213ENST00000542519 TOP2BQ02880 1626 aa26.55■■□□□ 1.84
ZNF384-213ENST00000542519 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.83
ZNF384-213ENST00000542519 ADAMTS12P58397 1594 aa26.46■■□□□ 1.83
ZNF384-213ENST00000542519 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
ZNF384-213ENST00000542519 NUP160Q12769 1436 aa26.37■■□□□ 1.81
ZNF384-213ENST00000542519 CEP170Q5SW79 1584 aa26.36■■□□□ 1.81
ZNF384-213ENST00000542519 ERICH3Q5RHP9 1530 aa26.35■■□□□ 1.81
ZNF384-213ENST00000542519 FHAD1B1AJZ9 1412 aa26.32■■□□□ 1.8
ZNF384-213ENST00000542519 SHROOM2Q13796 1616 aa26.31■■□□□ 1.8
ZNF384-213ENST00000542519 ERCC6L2Q5T890 1561 aa26.29■■□□□ 1.8
ZNF384-213ENST00000542519 TRHP20396 242 aaPredicted RBP26.29■■□□□ 1.8
ZNF384-213ENST00000542519 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
ZNF384-213ENST00000542519 PRG4Q92954 1404 aaPredicted RBP26.02■■□□□ 1.76
ZNF384-213ENST00000542519 CUL7Q14999 1698 aa25.99■■□□□ 1.75
ZNF384-213ENST00000542519 JPH4Q96JJ6 628 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms