RNA–Protein interactions for RNA: ENST00000542474.5

EMP1-210, Transcript of epithelial membrane protein 1, humanhuman

TSL 4

Gene EMP1, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1-210ENST00000542474 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
EMP1-210ENST00000542474 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
EMP1-210ENST00000542474 ABCC9O60706 1549 aa24.57■■□□□ 1.52
EMP1-210ENST00000542474 NACADO15069 1562 aa23.86■■□□□ 1.41
EMP1-210ENST00000542474 ZCCHC6Q5VYS8 1495 aaKnown RBP23.85■■□□□ 1.41
EMP1-210ENST00000542474 RB1CC1Q8TDY2 1594 aa23.83■■□□□ 1.41
EMP1-210ENST00000542474 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
EMP1-210ENST00000542474 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
EMP1-210ENST00000542474 DCAF8L2P0C7V8 631 aa23.66■■□□□ 1.38
EMP1-210ENST00000542474 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
EMP1-210ENST00000542474 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
EMP1-210ENST00000542474 BICRAQ9NZM4 1560 aa23.05■■□□□ 1.28
EMP1-210ENST00000542474 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
EMP1-210ENST00000542474 PABPN1Q86U42 306 aaKnown RBP eCLIP22.93■■□□□ 1.26
EMP1-210ENST00000542474 EIF4G1Q04637 1599 aaKnown RBP22.45■■□□□ 1.18
EMP1-210ENST00000542474 DNAJC5BQ9UF47 199 aa22.34■■□□□ 1.17
EMP1-210ENST00000542474 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
EMP1-210ENST00000542474 BAZ1AQ9NRL2 1556 aaPredicted RBP22.18■■□□□ 1.14
EMP1-210ENST00000542474 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
EMP1-210ENST00000542474 CECR2Q9BXF3 1484 aa22.16■■□□□ 1.14
EMP1-210ENST00000542474 SMARCA2P51531 1590 aa22.01■■□□□ 1.11
EMP1-210ENST00000542474 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
EMP1-210ENST00000542474 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
EMP1-210ENST00000542474 NCAPD3P42695 1498 aa21.97■■□□□ 1.11
EMP1-210ENST00000542474 ATAD2BQ9ULI0 1458 aa21.97■■□□□ 1.11
EMP1-210ENST00000542474 HMGXB3Q12766 1538 aa21.91■■□□□ 1.1
EMP1-210ENST00000542474 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
EMP1-210ENST00000542474 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
EMP1-210ENST00000542474 WIZO95785 1651 aa21.77■■□□□ 1.08
EMP1-210ENST00000542474 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
EMP1-210ENST00000542474 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
EMP1-210ENST00000542474 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
EMP1-210ENST00000542474 NESP48681 1621 aa21.29■■□□□ 1
EMP1-210ENST00000542474 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
EMP1-210ENST00000542474 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
EMP1-210ENST00000542474 CFTRP13569 1480 aa21.24■□□□□ 0.99
EMP1-210ENST00000542474 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
EMP1-210ENST00000542474 ERCC6Q03468 1493 aa21.21■□□□□ 0.99
EMP1-210ENST00000542474 PRDM2Q13029 1718 aa21.2■□□□□ 0.98
EMP1-210ENST00000542474 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
EMP1-210ENST00000542474 FANCD2Q9BXW9 1451 aa21.06■□□□□ 0.96
EMP1-210ENST00000542474 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
EMP1-210ENST00000542474 THOC2Q8NI27 1593 aaKnown RBP21.04■□□□□ 0.96
EMP1-210ENST00000542474 CUX2O14529 1486 aa21.01■□□□□ 0.95
EMP1-210ENST00000542474 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
EMP1-210ENST00000542474 WDR62O43379 1518 aa20.93■□□□□ 0.94
EMP1-210ENST00000542474 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
EMP1-210ENST00000542474 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
EMP1-210ENST00000542474 DNMBPQ6XZF7 1577 aa20.77■□□□□ 0.92
EMP1-210ENST00000542474 TOPBP1Q92547 1522 aa20.74■□□□□ 0.91
EMP1-210ENST00000542474 CUX1P39880 1505 aa20.63■□□□□ 0.89
EMP1-210ENST00000542474 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
EMP1-210ENST00000542474 POLA1P09884 1462 aaPredicted RBP20.57■□□□□ 0.88
EMP1-210ENST00000542474 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.88
EMP1-210ENST00000542474 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
EMP1-210ENST00000542474 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
EMP1-210ENST00000542474 FGD5Q6ZNL6 1462 aa20.54■□□□□ 0.88
EMP1-210ENST00000542474 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
EMP1-210ENST00000542474 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
EMP1-210ENST00000542474 WDR97A6NE52 1622 aa20.49■□□□□ 0.87
EMP1-210ENST00000542474 SOGA1O94964 1423 aa20.47■□□□□ 0.87
EMP1-210ENST00000542474 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
EMP1-210ENST00000542474 ZNF608Q9ULD9 1512 aaPredicted RBP20.42■□□□□ 0.86
EMP1-210ENST00000542474 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
EMP1-210ENST00000542474 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
EMP1-210ENST00000542474 AQRO60306 1485 aaKnown RBP eCLIP20.32■□□□□ 0.84
EMP1-210ENST00000542474 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
EMP1-210ENST00000542474 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
EMP1-210ENST00000542474 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
EMP1-210ENST00000542474 GAPVD1Q14C86 1478 aa20.26■□□□□ 0.83
EMP1-210ENST00000542474 GRIN2BQ13224 1484 aa20.25■□□□□ 0.83
EMP1-210ENST00000542474 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
EMP1-210ENST00000542474 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
EMP1-210ENST00000542474 DNAJC5Q9H3Z4 198 aa20.17■□□□□ 0.82
EMP1-210ENST00000542474 SNAPC4Q5SXM2 1469 aa20.17■□□□□ 0.82
EMP1-210ENST00000542474 CHD1O14646 1710 aa20.14■□□□□ 0.81
EMP1-210ENST00000542474 KIF27Q86VH2 1401 aa20.14■□□□□ 0.81
EMP1-210ENST00000542474 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
EMP1-210ENST00000542474 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
EMP1-210ENST00000542474 OSCARQ8IYS5 282 aa20.09■□□□□ 0.81
EMP1-210ENST00000542474 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
EMP1-210ENST00000542474 FHAD1B1AJZ9 1412 aa20.05■□□□□ 0.8
EMP1-210ENST00000542474 CUL7Q14999 1698 aa20.04■□□□□ 0.8
EMP1-210ENST00000542474 CHMP7Q8WUX9 453 aaPredicted RBP20.03■□□□□ 0.8
EMP1-210ENST00000542474 FBLN2P98095 1184 aa20.01■□□□□ 0.79
EMP1-210ENST00000542474 IGF1RP08069 1367 aa20■□□□□ 0.79
EMP1-210ENST00000542474 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
EMP1-210ENST00000542474 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
EMP1-210ENST00000542474 CLASP1Q7Z460 1538 aa19.92■□□□□ 0.78
EMP1-210ENST00000542474 NUP160Q12769 1436 aa19.91■□□□□ 0.78
EMP1-210ENST00000542474 EEA1Q15075 1411 aa19.91■□□□□ 0.78
EMP1-210ENST00000542474 RUSC2Q8N2Y8 1516 aa19.9■□□□□ 0.78
EMP1-210ENST00000542474 CARMIL1Q5VZK9 1371 aa19.89■□□□□ 0.77
EMP1-210ENST00000542474 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
EMP1-210ENST00000542474 RAPGEF2Q9Y4G8 1499 aa19.82■□□□□ 0.76
EMP1-210ENST00000542474 PRXQ9BXM0 1461 aa19.79■□□□□ 0.76
EMP1-210ENST00000542474 ARHGEF11O15085 1522 aa19.78■□□□□ 0.76
EMP1-210ENST00000542474 RIMBP3CA6NJZ7 1639 aa19.77■□□□□ 0.76
EMP1-210ENST00000542474 RIMBP3BA6NNM3 1639 aa19.77■□□□□ 0.76
EMP1-210ENST00000542474 SHROOM2Q13796 1616 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms