RNA–Protein interactions for RNA: ENST00000542450.5

CADM1-213, Transcript of cell adhesion molecule 1, humanhuman

TSL 3

Gene CADM1, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-213ENST00000542450 NISCHQ9Y2I1 1504 aa26.75■■□□□ 1.87
CADM1-213ENST00000542450 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
CADM1-213ENST00000542450 ABCC9O60706 1549 aa23.59■■□□□ 1.37
CADM1-213ENST00000542450 RB1CC1Q8TDY2 1594 aa22.66■■□□□ 1.22
CADM1-213ENST00000542450 NACADO15069 1562 aa22.57■■□□□ 1.2
CADM1-213ENST00000542450 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
CADM1-213ENST00000542450 MYO15BQ96JP2 1530 aa22.37■■□□□ 1.17
CADM1-213ENST00000542450 ZCCHC6Q5VYS8 1495 aaKnown RBP22.23■■□□□ 1.15
CADM1-213ENST00000542450 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
CADM1-213ENST00000542450 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
CADM1-213ENST00000542450 PABPN1Q86U42 306 aaKnown RBP eCLIP21.96■■□□□ 1.11
CADM1-213ENST00000542450 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
CADM1-213ENST00000542450 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
CADM1-213ENST00000542450 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.08
CADM1-213ENST00000542450 SCRIBQ14160 1630 aa21.77■■□□□ 1.07
CADM1-213ENST00000542450 EIF4G1Q04637 1599 aaKnown RBP21.38■■□□□ 1.01
CADM1-213ENST00000542450 CC2D2AQ9P2K1 1620 aa21.35■■□□□ 1.01
CADM1-213ENST00000542450 CECR2Q9BXF3 1484 aa21.25■□□□□ 0.99
CADM1-213ENST00000542450 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
CADM1-213ENST00000542450 NCAPD3P42695 1498 aa20.8■□□□□ 0.92
CADM1-213ENST00000542450 BAZ1AQ9NRL2 1556 aaPredicted RBP20.79■□□□□ 0.92
CADM1-213ENST00000542450 SMARCA2P51531 1590 aa20.77■□□□□ 0.92
CADM1-213ENST00000542450 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
CADM1-213ENST00000542450 HMGXB3Q12766 1538 aa20.7■□□□□ 0.9
CADM1-213ENST00000542450 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.9
CADM1-213ENST00000542450 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
CADM1-213ENST00000542450 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
CADM1-213ENST00000542450 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
CADM1-213ENST00000542450 WIZO95785 1651 aa20.35■□□□□ 0.85
CADM1-213ENST00000542450 LAMC3Q9Y6N6 1575 aa20.32■□□□□ 0.84
CADM1-213ENST00000542450 NESP48681 1621 aa20.31■□□□□ 0.84
CADM1-213ENST00000542450 CUX2O14529 1486 aa20.3■□□□□ 0.84
CADM1-213ENST00000542450 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
CADM1-213ENST00000542450 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
CADM1-213ENST00000542450 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
CADM1-213ENST00000542450 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
CADM1-213ENST00000542450 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
CADM1-213ENST00000542450 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
CADM1-213ENST00000542450 CFTRP13569 1480 aa20■□□□□ 0.79
CADM1-213ENST00000542450 MRC2Q9UBG0 1479 aa19.98■□□□□ 0.79
CADM1-213ENST00000542450 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
CADM1-213ENST00000542450 FANCD2Q9BXW9 1451 aa19.94■□□□□ 0.78
CADM1-213ENST00000542450 WDR62O43379 1518 aa19.92■□□□□ 0.78
CADM1-213ENST00000542450 DNAJC5Q9H3Z4 198 aa19.91■□□□□ 0.78
CADM1-213ENST00000542450 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
CADM1-213ENST00000542450 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
CADM1-213ENST00000542450 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
CADM1-213ENST00000542450 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
CADM1-213ENST00000542450 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
CADM1-213ENST00000542450 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
CADM1-213ENST00000542450 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
CADM1-213ENST00000542450 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
CADM1-213ENST00000542450 ZNF608Q9ULD9 1512 aaPredicted RBP19.42■□□□□ 0.7
CADM1-213ENST00000542450 POLA1P09884 1462 aaPredicted RBP19.41■□□□□ 0.7
CADM1-213ENST00000542450 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
CADM1-213ENST00000542450 EIF4G3O43432 1585 aaKnown RBP19.38■□□□□ 0.69
CADM1-213ENST00000542450 OSCARQ8IYS5 282 aa19.38■□□□□ 0.69
CADM1-213ENST00000542450 CUX1P39880 1505 aa19.33■□□□□ 0.68
CADM1-213ENST00000542450 SOGA1O94964 1423 aa19.33■□□□□ 0.68
CADM1-213ENST00000542450 FGD5Q6ZNL6 1462 aa19.32■□□□□ 0.68
CADM1-213ENST00000542450 WDR97A6NE52 1622 aa19.31■□□□□ 0.68
CADM1-213ENST00000542450 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
CADM1-213ENST00000542450 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
CADM1-213ENST00000542450 TDRD9Q8NDG6 1382 aaKnown RBP19.21■□□□□ 0.67
CADM1-213ENST00000542450 CHD1O14646 1710 aa19.2■□□□□ 0.66
CADM1-213ENST00000542450 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
CADM1-213ENST00000542450 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
CADM1-213ENST00000542450 MAGI1Q96QZ7 1491 aaPredicted RBP19.15■□□□□ 0.66
CADM1-213ENST00000542450 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
CADM1-213ENST00000542450 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.66
CADM1-213ENST00000542450 TOP2BQ02880 1626 aa19.14■□□□□ 0.65
CADM1-213ENST00000542450 SNAPC4Q5SXM2 1469 aa19.13■□□□□ 0.65
CADM1-213ENST00000542450 FBLN2P98095 1184 aa19.12■□□□□ 0.65
CADM1-213ENST00000542450 TRIM41Q8WV44 630 aa19.12■□□□□ 0.65
CADM1-213ENST00000542450 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
CADM1-213ENST00000542450 PBRM1Q86U86 1689 aa19.1■□□□□ 0.65
CADM1-213ENST00000542450 RIMBP3CA6NJZ7 1639 aa19.09■□□□□ 0.65
CADM1-213ENST00000542450 RIMBP3BA6NNM3 1639 aa19.09■□□□□ 0.65
CADM1-213ENST00000542450 RIMBP3Q9UFD9 1639 aa19.09■□□□□ 0.65
CADM1-213ENST00000542450 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.65
CADM1-213ENST00000542450 SYNJ1O43426 1573 aa19.08■□□□□ 0.65
CADM1-213ENST00000542450 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
CADM1-213ENST00000542450 ARHGEF11O15085 1522 aa19.05■□□□□ 0.64
CADM1-213ENST00000542450 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
CADM1-213ENST00000542450 CLASP1Q7Z460 1538 aa18.97■□□□□ 0.63
CADM1-213ENST00000542450 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
CADM1-213ENST00000542450 ADAMTS12P58397 1594 aa18.92■□□□□ 0.62
CADM1-213ENST00000542450 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.61
CADM1-213ENST00000542450 GRIN2AQ12879 1464 aa18.89■□□□□ 0.61
CADM1-213ENST00000542450 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
CADM1-213ENST00000542450 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
CADM1-213ENST00000542450 NUP160Q12769 1436 aa18.82■□□□□ 0.6
CADM1-213ENST00000542450 CEP170Q5SW79 1584 aa18.79■□□□□ 0.6
CADM1-213ENST00000542450 KIF27Q86VH2 1401 aa18.78■□□□□ 0.6
CADM1-213ENST00000542450 CUL7Q14999 1698 aa18.73■□□□□ 0.59
CADM1-213ENST00000542450 SHROOM2Q13796 1616 aa18.71■□□□□ 0.59
CADM1-213ENST00000542450 IGF1RP08069 1367 aa18.68■□□□□ 0.58
CADM1-213ENST00000542450 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.58
CADM1-213ENST00000542450 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.57
CADM1-213ENST00000542450 JPH4Q96JJ6 628 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms