RNA–Protein interactions for RNA: ENST00000542432.5

RECQL-208, Transcript of RecQ like helicase, humanhuman

TSL 3

Gene RECQL, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL-208ENST00000542432 NISCHQ9Y2I1 1504 aa25.01■■□□□ 1.59
RECQL-208ENST00000542432 ABCC9O60706 1549 aa22.29■■□□□ 1.16
RECQL-208ENST00000542432 CCDC180Q9P1Z9 1646 aa22.28■■□□□ 1.16
RECQL-208ENST00000542432 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
RECQL-208ENST00000542432 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
RECQL-208ENST00000542432 NACADO15069 1562 aa21.06■□□□□ 0.96
RECQL-208ENST00000542432 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
RECQL-208ENST00000542432 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
RECQL-208ENST00000542432 MYO15BQ96JP2 1530 aa20.77■□□□□ 0.92
RECQL-208ENST00000542432 ZCCHC6Q5VYS8 1495 aaKnown RBP20.76■□□□□ 0.91
RECQL-208ENST00000542432 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
RECQL-208ENST00000542432 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
RECQL-208ENST00000542432 DCAF1Q9Y4B6 1507 aa20.58■□□□□ 0.89
RECQL-208ENST00000542432 SCRIBQ14160 1630 aa20.45■□□□□ 0.87
RECQL-208ENST00000542432 SHROOM4Q9ULL8 1493 aa20.22■□□□□ 0.83
RECQL-208ENST00000542432 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.8
RECQL-208ENST00000542432 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.8
RECQL-208ENST00000542432 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.8
RECQL-208ENST00000542432 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
RECQL-208ENST00000542432 SMARCA4P51532 1647 aa19.47■□□□□ 0.71
RECQL-208ENST00000542432 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
RECQL-208ENST00000542432 BAZ1AQ9NRL2 1556 aaPredicted RBP19.38■□□□□ 0.69
RECQL-208ENST00000542432 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
RECQL-208ENST00000542432 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
RECQL-208ENST00000542432 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
RECQL-208ENST00000542432 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
RECQL-208ENST00000542432 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
RECQL-208ENST00000542432 NESP48681 1621 aa19.2■□□□□ 0.66
RECQL-208ENST00000542432 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
RECQL-208ENST00000542432 WIZO95785 1651 aa19.08■□□□□ 0.65
RECQL-208ENST00000542432 CUX2O14529 1486 aa19.03■□□□□ 0.64
RECQL-208ENST00000542432 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
RECQL-208ENST00000542432 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
RECQL-208ENST00000542432 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
RECQL-208ENST00000542432 THOC2Q8NI27 1593 aaKnown RBP18.9■□□□□ 0.62
RECQL-208ENST00000542432 KIF21AQ7Z4S6 1674 aa18.89■□□□□ 0.61
RECQL-208ENST00000542432 PDS5BQ9NTI5 1447 aa18.89■□□□□ 0.61
RECQL-208ENST00000542432 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
RECQL-208ENST00000542432 TOP2AP11388 1531 aaKnown RBP18.82■□□□□ 0.6
RECQL-208ENST00000542432 MRC2Q9UBG0 1479 aa18.74■□□□□ 0.59
RECQL-208ENST00000542432 CFTRP13569 1480 aa18.71■□□□□ 0.59
RECQL-208ENST00000542432 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
RECQL-208ENST00000542432 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
RECQL-208ENST00000542432 WDR62O43379 1518 aa18.67■□□□□ 0.58
RECQL-208ENST00000542432 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
RECQL-208ENST00000542432 URB2Q14146 1524 aaKnown RBP18.56■□□□□ 0.56
RECQL-208ENST00000542432 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
RECQL-208ENST00000542432 TOPBP1Q92547 1522 aa18.37■□□□□ 0.53
RECQL-208ENST00000542432 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
RECQL-208ENST00000542432 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.52
RECQL-208ENST00000542432 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
RECQL-208ENST00000542432 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
RECQL-208ENST00000542432 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
RECQL-208ENST00000542432 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
RECQL-208ENST00000542432 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
RECQL-208ENST00000542432 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
RECQL-208ENST00000542432 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
RECQL-208ENST00000542432 AQRO60306 1485 aaKnown RBP eCLIP18.18■□□□□ 0.5
RECQL-208ENST00000542432 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
RECQL-208ENST00000542432 TARBP1Q13395 1621 aaKnown RBP18.17■□□□□ 0.5
RECQL-208ENST00000542432 CUX1P39880 1505 aa18.13■□□□□ 0.49
RECQL-208ENST00000542432 SOGA1O94964 1423 aa18.12■□□□□ 0.49
RECQL-208ENST00000542432 FGD5Q6ZNL6 1462 aa18.12■□□□□ 0.49
RECQL-208ENST00000542432 TDRD9Q8NDG6 1382 aaKnown RBP18.11■□□□□ 0.49
RECQL-208ENST00000542432 FBLN2P98095 1184 aa18.06■□□□□ 0.48
RECQL-208ENST00000542432 CHD1O14646 1710 aa18.01■□□□□ 0.47
RECQL-208ENST00000542432 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
RECQL-208ENST00000542432 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
RECQL-208ENST00000542432 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
RECQL-208ENST00000542432 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
RECQL-208ENST00000542432 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
RECQL-208ENST00000542432 WDR97A6NE52 1622 aa17.92■□□□□ 0.46
RECQL-208ENST00000542432 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
RECQL-208ENST00000542432 GAPVD1Q14C86 1478 aa17.9■□□□□ 0.46
RECQL-208ENST00000542432 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
RECQL-208ENST00000542432 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.45
RECQL-208ENST00000542432 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
RECQL-208ENST00000542432 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
RECQL-208ENST00000542432 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
RECQL-208ENST00000542432 CYB5RLQ6IPT4 315 aa17.86■□□□□ 0.45
RECQL-208ENST00000542432 PBRM1Q86U86 1689 aa17.85■□□□□ 0.45
RECQL-208ENST00000542432 TOP2BQ02880 1626 aa17.84■□□□□ 0.45
RECQL-208ENST00000542432 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
RECQL-208ENST00000542432 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.45
RECQL-208ENST00000542432 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.44
RECQL-208ENST00000542432 ARAP1Q96P48 1450 aa17.81■□□□□ 0.44
RECQL-208ENST00000542432 CLASP1Q7Z460 1538 aa17.8■□□□□ 0.44
RECQL-208ENST00000542432 ADAMTS12P58397 1594 aa17.71■□□□□ 0.43
RECQL-208ENST00000542432 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
RECQL-208ENST00000542432 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
RECQL-208ENST00000542432 CEP170Q5SW79 1584 aa17.65■□□□□ 0.42
RECQL-208ENST00000542432 ERICH3Q5RHP9 1530 aa17.64■□□□□ 0.41
RECQL-208ENST00000542432 NUP160Q12769 1436 aa17.63■□□□□ 0.41
RECQL-208ENST00000542432 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
RECQL-208ENST00000542432 ERCC6L2Q5T890 1561 aa17.61■□□□□ 0.41
RECQL-208ENST00000542432 KIF27Q86VH2 1401 aa17.52■□□□□ 0.4
RECQL-208ENST00000542432 IGF1RP08069 1367 aa17.51■□□□□ 0.39
RECQL-208ENST00000542432 SHROOM2Q13796 1616 aa17.49■□□□□ 0.39
RECQL-208ENST00000542432 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
RECQL-208ENST00000542432 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms