RNA–Protein interactions for RNA: ENST00000542277.5

PTPN6-216, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 664 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-216ENST00000542277 NISCHQ9Y2I1 1504 aa44.87■■■■■ 4.77
PTPN6-216ENST00000542277 ABCC9O60706 1549 aa40.5■■■■■ 4.07
PTPN6-216ENST00000542277 CCDC180Q9P1Z9 1646 aa40.03■■■■■ 4
PTPN6-216ENST00000542277 DNAJC5BQ9UF47 199 aa38.35■■■■□ 3.73
PTPN6-216ENST00000542277 RB1CC1Q8TDY2 1594 aa38.31■■■■□ 3.72
PTPN6-216ENST00000542277 DCAF8L2P0C7V8 631 aa38.26■■■■□ 3.72
PTPN6-216ENST00000542277 NACADO15069 1562 aa38.06■■■■□ 3.68
PTPN6-216ENST00000542277 PABPN1Q86U42 306 aaKnown RBP eCLIP37.9■■■■□ 3.66
PTPN6-216ENST00000542277 MYO15BQ96JP2 1530 aa37.49■■■■□ 3.59
PTPN6-216ENST00000542277 UNC13AQ9UPW8 1703 aa37.29■■■■□ 3.56
PTPN6-216ENST00000542277 BICRAQ9NZM4 1560 aa37.27■■■■□ 3.56
PTPN6-216ENST00000542277 ZCCHC6Q5VYS8 1495 aaKnown RBP37.1■■■■□ 3.53
PTPN6-216ENST00000542277 DCAF1Q9Y4B6 1507 aa36.97■■■■□ 3.51
PTPN6-216ENST00000542277 SCRIBQ14160 1630 aa36.64■■■■□ 3.46
PTPN6-216ENST00000542277 SHROOM4Q9ULL8 1493 aa36.62■■■■□ 3.45
PTPN6-216ENST00000542277 CECR2Q9BXF3 1484 aa36.47■■■■□ 3.43
PTPN6-216ENST00000542277 CC2D2AQ9P2K1 1620 aa36.45■■■■□ 3.42
PTPN6-216ENST00000542277 EIF4G1Q04637 1599 aaKnown RBP36.34■■■■□ 3.41
PTPN6-216ENST00000542277 NCAPD3P42695 1498 aa35.28■■■■□ 3.24
PTPN6-216ENST00000542277 DNAJC5Q9H3Z4 198 aa35.22■■■■□ 3.23
PTPN6-216ENST00000542277 ATAD2BQ9ULI0 1458 aa35.14■■■■□ 3.22
PTPN6-216ENST00000542277 SMARCA4P51532 1647 aa34.92■■■■□ 3.18
PTPN6-216ENST00000542277 ERCC6Q03468 1493 aa34.91■■■■□ 3.18
PTPN6-216ENST00000542277 SMARCA2P51531 1590 aa34.9■■■■□ 3.18
PTPN6-216ENST00000542277 CUX2O14529 1486 aa34.83■■■■□ 3.17
PTPN6-216ENST00000542277 HMGXB3Q12766 1538 aa34.81■■■■□ 3.16
PTPN6-216ENST00000542277 NESP48681 1621 aa34.77■■■■□ 3.16
PTPN6-216ENST00000542277 BAZ1AQ9NRL2 1556 aaPredicted RBP34.76■■■■□ 3.16
PTPN6-216ENST00000542277 BAZ1BQ9UIG0 1483 aaKnown RBP34.72■■■■□ 3.15
PTPN6-216ENST00000542277 MROH2BQ7Z745 1585 aa34.62■■■■□ 3.13
PTPN6-216ENST00000542277 PEG3Q9GZU2 1588 aa34.57■■■■□ 3.13
PTPN6-216ENST00000542277 LAMC3Q9Y6N6 1575 aa34.32■■■■□ 3.08
PTPN6-216ENST00000542277 PDS5BQ9NTI5 1447 aa34.29■■■■□ 3.08
PTPN6-216ENST00000542277 CADPSQ9ULU8 1353 aa34.24■■■■□ 3.07
PTPN6-216ENST00000542277 THOC2Q8NI27 1593 aaKnown RBP34.2■■■■□ 3.07
PTPN6-216ENST00000542277 WIZO95785 1651 aa34.09■■■■□ 3.05
PTPN6-216ENST00000542277 KIF21AQ7Z4S6 1674 aa34.06■■■■□ 3.04
PTPN6-216ENST00000542277 RSF1Q96T23 1441 aaPredicted RBP33.93■■■■□ 3.02
PTPN6-216ENST00000542277 MRC2Q9UBG0 1479 aa33.93■■■■□ 3.02
PTPN6-216ENST00000542277 WDR62O43379 1518 aa33.79■■■■□ 3
PTPN6-216ENST00000542277 FANCD2Q9BXW9 1451 aa33.77■■■■□ 3
PTPN6-216ENST00000542277 CFTRP13569 1480 aa33.76■■■■□ 3
PTPN6-216ENST00000542277 CEP164Q9UPV0 1460 aa33.76■■■□□ 2.99
PTPN6-216ENST00000542277 TRIM41Q8WV44 630 aa33.64■■■□□ 2.98
PTPN6-216ENST00000542277 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
PTPN6-216ENST00000542277 URB2Q14146 1524 aaKnown RBP33.5■■■□□ 2.95
PTPN6-216ENST00000542277 OSCARQ8IYS5 282 aa33.49■■■□□ 2.95
PTPN6-216ENST00000542277 CCDC88BA6NC98 1476 aa33.43■■■□□ 2.94
PTPN6-216ENST00000542277 ZNF608Q9ULD9 1512 aaPredicted RBP33.16■■■□□ 2.9
PTPN6-216ENST00000542277 IFT140Q96RY7 1462 aa33.13■■■□□ 2.89
PTPN6-216ENST00000542277 TOPBP1Q92547 1522 aa33.1■■■□□ 2.89
PTPN6-216ENST00000542277 ABCC8Q09428 1581 aa33■■■□□ 2.87
PTPN6-216ENST00000542277 PRDM2Q13029 1718 aa32.99■■■□□ 2.87
PTPN6-216ENST00000542277 AQRO60306 1485 aaKnown RBP eCLIP32.9■■■□□ 2.86
PTPN6-216ENST00000542277 DNMBPQ6XZF7 1577 aa32.87■■■□□ 2.85
PTPN6-216ENST00000542277 FBLN2P98095 1184 aa32.8■■■□□ 2.84
PTPN6-216ENST00000542277 RIMBP3CA6NJZ7 1639 aa32.77■■■□□ 2.84
PTPN6-216ENST00000542277 RIMBP3BA6NNM3 1639 aa32.77■■■□□ 2.84
PTPN6-216ENST00000542277 RIMBP3Q9UFD9 1639 aa32.77■■■□□ 2.84
PTPN6-216ENST00000542277 POLA1P09884 1462 aaPredicted RBP32.76■■■□□ 2.84
PTPN6-216ENST00000542277 CYB5RLQ6IPT4 315 aa32.75■■■□□ 2.83
PTPN6-216ENST00000542277 EIF4G3O43432 1585 aaKnown RBP32.75■■■□□ 2.83
PTPN6-216ENST00000542277 RAD54L2Q9Y4B4 1467 aa32.74■■■□□ 2.83
PTPN6-216ENST00000542277 TARBP1Q13395 1621 aaKnown RBP32.73■■■□□ 2.83
PTPN6-216ENST00000542277 TDRD9Q8NDG6 1382 aaKnown RBP32.73■■■□□ 2.83
PTPN6-216ENST00000542277 SOGA1O94964 1423 aa32.72■■■□□ 2.83
PTPN6-216ENST00000542277 ARHGEF11O15085 1522 aa32.72■■■□□ 2.83
PTPN6-216ENST00000542277 FGD5Q6ZNL6 1462 aa32.54■■■□□ 2.8
PTPN6-216ENST00000542277 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
PTPN6-216ENST00000542277 CHMP7Q8WUX9 453 aaPredicted RBP32.51■■■□□ 2.79
PTPN6-216ENST00000542277 CUX1P39880 1505 aa32.49■■■□□ 2.79
PTPN6-216ENST00000542277 CHD1O14646 1710 aa32.47■■■□□ 2.79
PTPN6-216ENST00000542277 SNAPC4Q5SXM2 1469 aa32.43■■■□□ 2.78
PTPN6-216ENST00000542277 ARAP1Q96P48 1450 aa32.42■■■□□ 2.78
PTPN6-216ENST00000542277 TRHP20396 242 aaPredicted RBP32.39■■■□□ 2.78
PTPN6-216ENST00000542277 GRIN2BQ13224 1484 aa32.35■■■□□ 2.77
PTPN6-216ENST00000542277 MAGI1Q96QZ7 1491 aaPredicted RBP32.3■■■□□ 2.76
PTPN6-216ENST00000542277 WDR97A6NE52 1622 aa32.27■■■□□ 2.76
PTPN6-216ENST00000542277 GAPVD1Q14C86 1478 aa32.24■■■□□ 2.75
PTPN6-216ENST00000542277 SYNJ2O15056 1496 aa32.23■■■□□ 2.75
PTPN6-216ENST00000542277 CLASP1Q7Z460 1538 aa32.21■■■□□ 2.75
PTPN6-216ENST00000542277 SYNJ1O43426 1573 aa32.16■■■□□ 2.74
PTPN6-216ENST00000542277 ABCA10Q8WWZ4 1543 aa32.15■■■□□ 2.74
PTPN6-216ENST00000542277 WRNQ14191 1432 aaPredicted RBP eCLIP32.07■■■□□ 2.72
PTPN6-216ENST00000542277 ABCA5Q8WWZ7 1642 aa31.98■■■□□ 2.71
PTPN6-216ENST00000542277 PBRM1Q86U86 1689 aa31.96■■■□□ 2.71
PTPN6-216ENST00000542277 GRIN2AQ12879 1464 aa31.91■■■□□ 2.7
PTPN6-216ENST00000542277 TOP2BQ02880 1626 aa31.85■■■□□ 2.69
PTPN6-216ENST00000542277 FHAD1B1AJZ9 1412 aa31.84■■■□□ 2.69
PTPN6-216ENST00000542277 NUP160Q12769 1436 aa31.83■■■□□ 2.69
PTPN6-216ENST00000542277 ERCC6L2Q5T890 1561 aa31.81■■■□□ 2.68
PTPN6-216ENST00000542277 BIVM-ERCC5R4GMW8 1640 aa31.78■■■□□ 2.68
PTPN6-216ENST00000542277 ADAMTS12P58397 1594 aa31.75■■■□□ 2.67
PTPN6-216ENST00000542277 CEP170Q5SW79 1584 aa31.75■■■□□ 2.67
PTPN6-216ENST00000542277 JPH4Q96JJ6 628 aa31.71■■■□□ 2.67
PTPN6-216ENST00000542277 ERICH3Q5RHP9 1530 aa31.69■■■□□ 2.66
PTPN6-216ENST00000542277 PRG4Q92954 1404 aaPredicted RBP31.61■■■□□ 2.65
PTPN6-216ENST00000542277 SHROOM2Q13796 1616 aa31.55■■■□□ 2.64
PTPN6-216ENST00000542277 IGF1RP08069 1367 aa31.51■■■□□ 2.63
PTPN6-216ENST00000542277 AEBP2Q6ZN18 517 aaPredicted RBP31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms