RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 NISCHQ9Y2I1 1504 aa38.61■■■■□ 3.77
SCNN1A-217ENST00000542260 CCDC180Q9P1Z9 1646 aa34.74■■■■□ 3.15
SCNN1A-217ENST00000542260 ABCC9O60706 1549 aa34.56■■■■□ 3.12
SCNN1A-217ENST00000542260 RB1CC1Q8TDY2 1594 aa33.02■■■□□ 2.88
SCNN1A-217ENST00000542260 NACADO15069 1562 aa32.79■■■□□ 2.84
SCNN1A-217ENST00000542260 DCAF8L2P0C7V8 631 aa32.5■■■□□ 2.79
SCNN1A-217ENST00000542260 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
SCNN1A-217ENST00000542260 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.76
SCNN1A-217ENST00000542260 DNAJC5BQ9UF47 199 aa32.24■■■□□ 2.75
SCNN1A-217ENST00000542260 PABPN1Q86U42 306 aaKnown RBP eCLIP32.11■■■□□ 2.73
SCNN1A-217ENST00000542260 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
SCNN1A-217ENST00000542260 BICRAQ9NZM4 1560 aa31.96■■■□□ 2.71
SCNN1A-217ENST00000542260 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.71
SCNN1A-217ENST00000542260 SHROOM4Q9ULL8 1493 aa31.67■■■□□ 2.66
SCNN1A-217ENST00000542260 SCRIBQ14160 1630 aa31.58■■■□□ 2.65
SCNN1A-217ENST00000542260 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
SCNN1A-217ENST00000542260 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
SCNN1A-217ENST00000542260 CECR2Q9BXF3 1484 aa31.15■■■□□ 2.58
SCNN1A-217ENST00000542260 NCAPD3P42695 1498 aa30.21■■■□□ 2.43
SCNN1A-217ENST00000542260 SMARCA4P51532 1647 aa30.14■■■□□ 2.42
SCNN1A-217ENST00000542260 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
SCNN1A-217ENST00000542260 SMARCA2P51531 1590 aa30.11■■■□□ 2.41
SCNN1A-217ENST00000542260 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
SCNN1A-217ENST00000542260 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
SCNN1A-217ENST00000542260 ERCC6Q03468 1493 aa29.9■■■□□ 2.38
SCNN1A-217ENST00000542260 BAZ1BQ9UIG0 1483 aaKnown RBP29.87■■■□□ 2.37
SCNN1A-217ENST00000542260 PEG3Q9GZU2 1588 aa29.87■■■□□ 2.37
SCNN1A-217ENST00000542260 CUX2O14529 1486 aa29.85■■■□□ 2.37
SCNN1A-217ENST00000542260 MROH2BQ7Z745 1585 aa29.72■■■□□ 2.35
SCNN1A-217ENST00000542260 NESP48681 1621 aa29.67■■■□□ 2.34
SCNN1A-217ENST00000542260 DNAJC5Q9H3Z4 198 aa29.66■■■□□ 2.34
SCNN1A-217ENST00000542260 LAMC3Q9Y6N6 1575 aa29.6■■■□□ 2.33
SCNN1A-217ENST00000542260 THOC2Q8NI27 1593 aaKnown RBP29.46■■■□□ 2.31
SCNN1A-217ENST00000542260 WIZO95785 1651 aa29.4■■■□□ 2.3
SCNN1A-217ENST00000542260 PDS5BQ9NTI5 1447 aa29.39■■■□□ 2.3
SCNN1A-217ENST00000542260 KIF21AQ7Z4S6 1674 aa29.39■■■□□ 2.3
SCNN1A-217ENST00000542260 CADPSQ9ULU8 1353 aa29.28■■■□□ 2.28
SCNN1A-217ENST00000542260 MRC2Q9UBG0 1479 aa29.13■■■□□ 2.25
SCNN1A-217ENST00000542260 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
SCNN1A-217ENST00000542260 WDR62O43379 1518 aa29.07■■■□□ 2.24
SCNN1A-217ENST00000542260 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
SCNN1A-217ENST00000542260 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
SCNN1A-217ENST00000542260 FANCD2Q9BXW9 1451 aa28.98■■■□□ 2.23
SCNN1A-217ENST00000542260 CFTRP13569 1480 aa28.97■■■□□ 2.23
SCNN1A-217ENST00000542260 PRDM2Q13029 1718 aa28.83■■■□□ 2.21
SCNN1A-217ENST00000542260 URB2Q14146 1524 aaKnown RBP28.7■■■□□ 2.19
SCNN1A-217ENST00000542260 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
SCNN1A-217ENST00000542260 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
SCNN1A-217ENST00000542260 ABCC8Q09428 1581 aa28.44■■■□□ 2.14
SCNN1A-217ENST00000542260 TOPBP1Q92547 1522 aa28.43■■■□□ 2.14
SCNN1A-217ENST00000542260 OSCARQ8IYS5 282 aa28.42■■■□□ 2.14
SCNN1A-217ENST00000542260 TRIM41Q8WV44 630 aa28.39■■■□□ 2.14
SCNN1A-217ENST00000542260 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
SCNN1A-217ENST00000542260 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
SCNN1A-217ENST00000542260 EIF4G3O43432 1585 aaKnown RBP28.27■■■□□ 2.12
SCNN1A-217ENST00000542260 TARBP1Q13395 1621 aaKnown RBP28.19■■■□□ 2.1
SCNN1A-217ENST00000542260 POLA1P09884 1462 aaPredicted RBP28.14■■■□□ 2.09
SCNN1A-217ENST00000542260 RIMBP3CA6NJZ7 1639 aa28.1■■■□□ 2.09
SCNN1A-217ENST00000542260 RIMBP3BA6NNM3 1639 aa28.1■■■□□ 2.09
SCNN1A-217ENST00000542260 RIMBP3Q9UFD9 1639 aa28.1■■■□□ 2.09
SCNN1A-217ENST00000542260 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.084e-8■■■■■ 31.9
SCNN1A-217ENST00000542260 CHD1O14646 1710 aa28.05■■■□□ 2.08
SCNN1A-217ENST00000542260 WDR97A6NE52 1622 aa28.01■■■□□ 2.07
SCNN1A-217ENST00000542260 ARHGEF11O15085 1522 aa28■■■□□ 2.07
SCNN1A-217ENST00000542260 SOGA1O94964 1423 aa28■■■□□ 2.07
SCNN1A-217ENST00000542260 RAD54L2Q9Y4B4 1467 aa27.98■■■□□ 2.07
SCNN1A-217ENST00000542260 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
SCNN1A-217ENST00000542260 CUX1P39880 1505 aa27.93■■■□□ 2.06
SCNN1A-217ENST00000542260 TDRD9Q8NDG6 1382 aaKnown RBP27.89■■■□□ 2.06
SCNN1A-217ENST00000542260 FBLN2P98095 1184 aa27.89■■■□□ 2.06
SCNN1A-217ENST00000542260 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
SCNN1A-217ENST00000542260 SUPT5HO00267 1087 aaKnown RBP27.81■■■□□ 2.04
SCNN1A-217ENST00000542260 MAGI1Q96QZ7 1491 aaPredicted RBP27.81■■■□□ 2.04
SCNN1A-217ENST00000542260 GRIN2BQ13224 1484 aa27.78■■■□□ 2.04
SCNN1A-217ENST00000542260 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
SCNN1A-217ENST00000542260 PBRM1Q86U86 1689 aa27.74■■■□□ 2.03
SCNN1A-217ENST00000542260 CYB5RLQ6IPT4 315 aa27.72■■■□□ 2.03
SCNN1A-217ENST00000542260 CHMP7Q8WUX9 453 aaPredicted RBP27.71■■■□□ 2.03
SCNN1A-217ENST00000542260 ARAP1Q96P48 1450 aa27.7■■■□□ 2.03
SCNN1A-217ENST00000542260 CLASP1Q7Z460 1538 aa27.7■■■□□ 2.02
SCNN1A-217ENST00000542260 SYNJ2O15056 1496 aa27.7■■■□□ 2.02
SCNN1A-217ENST00000542260 GAPVD1Q14C86 1478 aa27.68■■■□□ 2.02
SCNN1A-217ENST00000542260 ABCA10Q8WWZ4 1543 aa27.67■■■□□ 2.02
SCNN1A-217ENST00000542260 ABCA5Q8WWZ7 1642 aa27.65■■■□□ 2.02
SCNN1A-217ENST00000542260 BIVM-ERCC5R4GMW8 1640 aa27.57■■■□□ 2
SCNN1A-217ENST00000542260 WRNQ14191 1432 aaPredicted RBP eCLIP27.57■■■□□ 2
SCNN1A-217ENST00000542260 TOP2BQ02880 1626 aa27.56■■■□□ 2
SCNN1A-217ENST00000542260 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
SCNN1A-217ENST00000542260 TRHP20396 242 aaPredicted RBP27.44■■□□□ 1.98
SCNN1A-217ENST00000542260 GRIN2AQ12879 1464 aa27.43■■□□□ 1.98
SCNN1A-217ENST00000542260 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
SCNN1A-217ENST00000542260 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
SCNN1A-217ENST00000542260 NUP160Q12769 1436 aa27.32■■□□□ 1.96
SCNN1A-217ENST00000542260 CEP170Q5SW79 1584 aa27.31■■□□□ 1.96
SCNN1A-217ENST00000542260 SHROOM2Q13796 1616 aa27.23■■□□□ 1.95
SCNN1A-217ENST00000542260 ERCC6L2Q5T890 1561 aa27.2■■□□□ 1.94
SCNN1A-217ENST00000542260 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
SCNN1A-217ENST00000542260 PRG4Q92954 1404 aaPredicted RBP27.03■■□□□ 1.92
SCNN1A-217ENST00000542260 CUL7Q14999 1698 aa27.02■■□□□ 1.92
SCNN1A-217ENST00000542260 KIF27Q86VH2 1401 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms