RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.06
DDX11-219ENST00000542242 CCDC180Q9P1Z9 1646 aa30.45■■■□□ 2.47
DDX11-219ENST00000542242 ABCC9O60706 1549 aa29.55■■■□□ 2.32
DDX11-219ENST00000542242 NACADO15069 1562 aa28.54■■■□□ 2.16
DDX11-219ENST00000542242 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
DDX11-219ENST00000542242 RB1CC1Q8TDY2 1594 aa28.51■■■□□ 2.15
DDX11-219ENST00000542242 MYO15BQ96JP2 1530 aa28.47■■■□□ 2.15
DDX11-219ENST00000542242 DCAF1Q9Y4B6 1507 aa28.36■■■□□ 2.13
DDX11-219ENST00000542242 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
DDX11-219ENST00000542242 UNC13AQ9UPW8 1703 aa28.08■■■□□ 2.09
DDX11-219ENST00000542242 BICRAQ9NZM4 1560 aa27.8■■■□□ 2.04
DDX11-219ENST00000542242 DNAJC5BQ9UF47 199 aa27.77■■■□□ 2.04
DDX11-219ENST00000542242 SCRIBQ14160 1630 aa27.66■■■□□ 2.02
DDX11-219ENST00000542242 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
DDX11-219ENST00000542242 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
DDX11-219ENST00000542242 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
DDX11-219ENST00000542242 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
DDX11-219ENST00000542242 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
DDX11-219ENST00000542242 CC2D2AQ9P2K1 1620 aa26.83■■□□□ 1.89
DDX11-219ENST00000542242 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
DDX11-219ENST00000542242 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
DDX11-219ENST00000542242 BAZ1AQ9NRL2 1556 aaPredicted RBP26.46■■□□□ 1.83
DDX11-219ENST00000542242 MROH2BQ7Z745 1585 aa26.36■■□□□ 1.81
DDX11-219ENST00000542242 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
DDX11-219ENST00000542242 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
DDX11-219ENST00000542242 NCAPD3P42695 1498 aa26.33■■□□□ 1.81
DDX11-219ENST00000542242 SMARCA2P51531 1590 aa26.29■■□□□ 1.8
DDX11-219ENST00000542242 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
DDX11-219ENST00000542242 DNAJC5Q9H3Z4 198 aa26.23■■□□□ 1.79
DDX11-219ENST00000542242 WIZO95785 1651 aa26.09■■□□□ 1.77
DDX11-219ENST00000542242 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
DDX11-219ENST00000542242 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
DDX11-219ENST00000542242 SUPT5HO00267 1087 aaKnown RBP25.91■■□□□ 1.74
DDX11-219ENST00000542242 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
DDX11-219ENST00000542242 NESP48681 1621 aa25.66■■□□□ 1.7
DDX11-219ENST00000542242 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
DDX11-219ENST00000542242 CADPSQ9ULU8 1353 aa25.5■■□□□ 1.67
DDX11-219ENST00000542242 CCDC88BA6NC98 1476 aa25.46■■□□□ 1.67
DDX11-219ENST00000542242 KIF21AQ7Z4S6 1674 aa25.43■■□□□ 1.66
DDX11-219ENST00000542242 CFTRP13569 1480 aa25.43■■□□□ 1.66
DDX11-219ENST00000542242 ERCC6Q03468 1493 aa25.38■■□□□ 1.65
DDX11-219ENST00000542242 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
DDX11-219ENST00000542242 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
DDX11-219ENST00000542242 CUX2O14529 1486 aa25.35■■□□□ 1.65
DDX11-219ENST00000542242 PDS5BQ9NTI5 1447 aa25.34■■□□□ 1.65
DDX11-219ENST00000542242 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
DDX11-219ENST00000542242 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
DDX11-219ENST00000542242 WDR62O43379 1518 aa25.13■■□□□ 1.61
DDX11-219ENST00000542242 MRC2Q9UBG0 1479 aa25.13■■□□□ 1.61
DDX11-219ENST00000542242 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
DDX11-219ENST00000542242 TOPBP1Q92547 1522 aa24.86■■□□□ 1.57
DDX11-219ENST00000542242 DNMBPQ6XZF7 1577 aa24.84■■□□□ 1.57
DDX11-219ENST00000542242 TRIM41Q8WV44 630 aa24.83■■□□□ 1.57
DDX11-219ENST00000542242 ABCC8Q09428 1581 aa24.81■■□□□ 1.56
DDX11-219ENST00000542242 CUX1P39880 1505 aa24.72■■□□□ 1.55
DDX11-219ENST00000542242 TARBP1Q13395 1621 aaKnown RBP24.67■■□□□ 1.54
DDX11-219ENST00000542242 POLA1P09884 1462 aaPredicted RBP24.65■■□□□ 1.54
DDX11-219ENST00000542242 IFT140Q96RY7 1462 aa24.64■■□□□ 1.54
DDX11-219ENST00000542242 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
DDX11-219ENST00000542242 ZNF608Q9ULD9 1512 aaPredicted RBP24.57■■□□□ 1.52
DDX11-219ENST00000542242 FGD5Q6ZNL6 1462 aa24.57■■□□□ 1.52
DDX11-219ENST00000542242 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
DDX11-219ENST00000542242 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
DDX11-219ENST00000542242 SYNJ1O43426 1573 aa24.53■■□□□ 1.52
DDX11-219ENST00000542242 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
DDX11-219ENST00000542242 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
DDX11-219ENST00000542242 WRNQ14191 1432 aaPredicted RBP eCLIP24.49■■□□□ 1.51
DDX11-219ENST00000542242 SOGA1O94964 1423 aa24.46■■□□□ 1.51
DDX11-219ENST00000542242 ABCA10Q8WWZ4 1543 aa24.38■■□□□ 1.49
DDX11-219ENST00000542242 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.493e-8■■■■■ 36.7
DDX11-219ENST00000542242 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
DDX11-219ENST00000542242 TDRD9Q8NDG6 1382 aaKnown RBP24.3■■□□□ 1.48
DDX11-219ENST00000542242 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
DDX11-219ENST00000542242 OSCARQ8IYS5 282 aa24.25■■□□□ 1.47
DDX11-219ENST00000542242 CHD1O14646 1710 aa24.21■■□□□ 1.47
DDX11-219ENST00000542242 GAPVD1Q14C86 1478 aa24.21■■□□□ 1.47
DDX11-219ENST00000542242 GRIN2BQ13224 1484 aa24.2■■□□□ 1.47
DDX11-219ENST00000542242 SNAPC4Q5SXM2 1469 aa24.17■■□□□ 1.46
DDX11-219ENST00000542242 MAGI1Q96QZ7 1491 aaPredicted RBP24.16■■□□□ 1.46
DDX11-219ENST00000542242 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
DDX11-219ENST00000542242 ERICH3Q5RHP9 1530 aa24.08■■□□□ 1.45
DDX11-219ENST00000542242 ADAMTS12P58397 1594 aa24.06■■□□□ 1.44
DDX11-219ENST00000542242 SYNJ2O15056 1496 aa24.06■■□□□ 1.44
DDX11-219ENST00000542242 CLASP1Q7Z460 1538 aa23.96■■□□□ 1.43
DDX11-219ENST00000542242 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
DDX11-219ENST00000542242 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
DDX11-219ENST00000542242 FAM9AQ8IZU1 332 aaPredicted RBP23.93■■□□□ 1.42
DDX11-219ENST00000542242 GRIN2AQ12879 1464 aa23.92■■□□□ 1.42
DDX11-219ENST00000542242 IGF1RP08069 1367 aa23.91■■□□□ 1.42
DDX11-219ENST00000542242 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
DDX11-219ENST00000542242 CUL7Q14999 1698 aa23.88■■□□□ 1.41
DDX11-219ENST00000542242 FBLN2P98095 1184 aa23.87■■□□□ 1.41
DDX11-219ENST00000542242 NUP160Q12769 1436 aa23.86■■□□□ 1.41
DDX11-219ENST00000542242 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
DDX11-219ENST00000542242 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
DDX11-219ENST00000542242 RIMBP3CA6NJZ7 1639 aa23.84■■□□□ 1.41
DDX11-219ENST00000542242 RIMBP3BA6NNM3 1639 aa23.84■■□□□ 1.41
DDX11-219ENST00000542242 RIMBP3Q9UFD9 1639 aa23.84■■□□□ 1.41
DDX11-219ENST00000542242 LOC105371045A0A1W2PR82 267 aa23.83■■□□□ 1.41
DDX11-219ENST00000542242 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms