RNA–Protein interactions for RNA: ENST00000542165.1

CWC15-203, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 1 (best)

Gene CWC15, Length 921 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-203ENST00000542165 NISCHQ9Y2I1 1504 aa50.45■■■■■ 5.67
CWC15-203ENST00000542165 CCDC180Q9P1Z9 1646 aa44.97■■■■■ 4.79
CWC15-203ENST00000542165 ABCC9O60706 1549 aa44.08■■■■■ 4.65
CWC15-203ENST00000542165 RB1CC1Q8TDY2 1594 aa42.43■■■■■ 4.38
CWC15-203ENST00000542165 NACADO15069 1562 aa42.33■■■■■ 4.37
CWC15-203ENST00000542165 DCAF8L2P0C7V8 631 aa42.22■■■■■ 4.35
CWC15-203ENST00000542165 MYO15BQ96JP2 1530 aa42.05■■■■■ 4.32
CWC15-203ENST00000542165 ZCCHC6Q5VYS8 1495 aaKnown RBP41.99■■■■■ 4.31
CWC15-203ENST00000542165 DCAF1Q9Y4B6 1507 aa41.79■■■■■ 4.28
CWC15-203ENST00000542165 UNC13AQ9UPW8 1703 aa41.33■■■■■ 4.21
CWC15-203ENST00000542165 PABPN1Q86U42 306 aaKnown RBP eCLIP41.13■■■■■ 4.17
CWC15-203ENST00000542165 BICRAQ9NZM4 1560 aa41.02■■■■■ 4.16
CWC15-203ENST00000542165 SCRIBQ14160 1630 aa40.96■■■■■ 4.15
CWC15-203ENST00000542165 SHROOM4Q9ULL8 1493 aa40.76■■■■■ 4.12
CWC15-203ENST00000542165 DNAJC5BQ9UF47 199 aa40.49■■■■■ 4.07
CWC15-203ENST00000542165 EIF4G1Q04637 1599 aaKnown RBP40.01■■■■■ 4
CWC15-203ENST00000542165 CC2D2AQ9P2K1 1620 aa39.87■■■■□ 3.97
CWC15-203ENST00000542165 CECR2Q9BXF3 1484 aa39.66■■■■□ 3.94
CWC15-203ENST00000542165 SMARCA4P51532 1647 aa39.18■■■■□ 3.86
CWC15-203ENST00000542165 BAZ1AQ9NRL2 1556 aaPredicted RBP39.16■■■■□ 3.86
CWC15-203ENST00000542165 NCAPD3P42695 1498 aa39.03■■■■□ 3.84
CWC15-203ENST00000542165 SMARCA2P51531 1590 aa39.02■■■■□ 3.84
CWC15-203ENST00000542165 ATAD2BQ9ULI0 1458 aa39■■■■□ 3.83
CWC15-203ENST00000542165 HMGXB3Q12766 1538 aa38.85■■■■□ 3.81
CWC15-203ENST00000542165 MROH2BQ7Z745 1585 aa38.82■■■■□ 3.81
CWC15-203ENST00000542165 PEG3Q9GZU2 1588 aa38.82■■■■□ 3.8
CWC15-203ENST00000542165 BAZ1BQ9UIG0 1483 aaKnown RBP38.72■■■■□ 3.79
CWC15-203ENST00000542165 WIZO95785 1651 aa38.4■■■■□ 3.74
CWC15-203ENST00000542165 RSF1Q96T23 1441 aaPredicted RBP38.35■■■■□ 3.73
CWC15-203ENST00000542165 ERCC6Q03468 1493 aa38.09■■■■□ 3.69
CWC15-203ENST00000542165 LAMC3Q9Y6N6 1575 aa38.06■■■■□ 3.68
CWC15-203ENST00000542165 TOP2AP11388 1531 aaKnown RBP38.06■■■■□ 3.68
CWC15-203ENST00000542165 NESP48681 1621 aa38.05■■■■□ 3.68
CWC15-203ENST00000542165 CADPSQ9ULU8 1353 aa37.89■■■■□ 3.66
CWC15-203ENST00000542165 PDS5BQ9NTI5 1447 aa37.84■■■■□ 3.65
CWC15-203ENST00000542165 CUX2O14529 1486 aa37.76■■■■□ 3.63
CWC15-203ENST00000542165 KIF21AQ7Z4S6 1674 aa37.63■■■■□ 3.62
CWC15-203ENST00000542165 CFTRP13569 1480 aa37.62■■■■□ 3.61
CWC15-203ENST00000542165 CCDC88BA6NC98 1476 aa37.57■■■■□ 3.6
CWC15-203ENST00000542165 THOC2Q8NI27 1593 aaKnown RBP37.56■■■■□ 3.6
CWC15-203ENST00000542165 FANCD2Q9BXW9 1451 aa37.45■■■■□ 3.59
CWC15-203ENST00000542165 CEP164Q9UPV0 1460 aa37.45■■■■□ 3.59
CWC15-203ENST00000542165 MRC2Q9UBG0 1479 aa37.41■■■■□ 3.58
CWC15-203ENST00000542165 PRDM2Q13029 1718 aa37.34■■■■□ 3.57
CWC15-203ENST00000542165 WDR62O43379 1518 aa37.28■■■■□ 3.56
CWC15-203ENST00000542165 SUPT5HO00267 1087 aaKnown RBP37.26■■■■□ 3.56
CWC15-203ENST00000542165 URB2Q14146 1524 aaKnown RBP37.03■■■■□ 3.52
CWC15-203ENST00000542165 ABCC8Q09428 1581 aa36.91■■■■□ 3.5
CWC15-203ENST00000542165 TOPBP1Q92547 1522 aa36.81■■■■□ 3.48
CWC15-203ENST00000542165 DNMBPQ6XZF7 1577 aa36.79■■■■□ 3.48
CWC15-203ENST00000542165 DNAJC5Q9H3Z4 198 aa36.71■■■■□ 3.47
CWC15-203ENST00000542165 IFT140Q96RY7 1462 aa36.68■■■■□ 3.46
CWC15-203ENST00000542165 POLA1P09884 1462 aaPredicted RBP36.49■■■■□ 3.43
CWC15-203ENST00000542165 CUX1P39880 1505 aa36.44■■■■□ 3.42
CWC15-203ENST00000542165 ZNF608Q9ULD9 1512 aaPredicted RBP36.42■■■■□ 3.42
CWC15-203ENST00000542165 TARBP1Q13395 1621 aaKnown RBP36.41■■■■□ 3.42
CWC15-203ENST00000542165 FGD5Q6ZNL6 1462 aa36.38■■■■□ 3.41
CWC15-203ENST00000542165 SOGA1O94964 1423 aa36.36■■■■□ 3.41
CWC15-203ENST00000542165 EIF4G3O43432 1585 aaKnown RBP36.32■■■■□ 3.41
CWC15-203ENST00000542165 RAD54L2Q9Y4B4 1467 aa36.3■■■■□ 3.4
CWC15-203ENST00000542165 WDR97A6NE52 1622 aa36.23■■■■□ 3.39
CWC15-203ENST00000542165 AQRO60306 1485 aaKnown RBP eCLIP36.22■■■■□ 3.391e-6■■■■□ 20
CWC15-203ENST00000542165 WRNQ14191 1432 aaPredicted RBP eCLIP36.21■■■■□ 3.39
CWC15-203ENST00000542165 OSCARQ8IYS5 282 aa36.15■■■■□ 3.38
CWC15-203ENST00000542165 TOP2BQ02880 1626 aa36.14■■■■□ 3.38
CWC15-203ENST00000542165 BIVM-ERCC5R4GMW8 1640 aa36.13■■■■□ 3.37
CWC15-203ENST00000542165 TDRD9Q8NDG6 1382 aaKnown RBP36.13■■■■□ 3.37
CWC15-203ENST00000542165 SYNJ1O43426 1573 aa36.06■■■■□ 3.36
CWC15-203ENST00000542165 ABCA10Q8WWZ4 1543 aa36.05■■■■□ 3.36
CWC15-203ENST00000542165 GRIN2BQ13224 1484 aa35.99■■■■□ 3.35
CWC15-203ENST00000542165 GAPVD1Q14C86 1478 aa35.94■■■■□ 3.34
CWC15-203ENST00000542165 SNAPC4Q5SXM2 1469 aa35.92■■■■□ 3.34
CWC15-203ENST00000542165 MAGI1Q96QZ7 1491 aaPredicted RBP35.92■■■■□ 3.34
CWC15-203ENST00000542165 ABCA5Q8WWZ7 1642 aa35.89■■■■□ 3.34
CWC15-203ENST00000542165 CHD1O14646 1710 aa35.88■■■■□ 3.33
CWC15-203ENST00000542165 FBLN2P98095 1184 aa35.87■■■■□ 3.33
CWC15-203ENST00000542165 PBRM1Q86U86 1689 aa35.86■■■■□ 3.33
CWC15-203ENST00000542165 CHMP7Q8WUX9 453 aaPredicted RBP35.78■■■■□ 3.32
CWC15-203ENST00000542165 SYNJ2O15056 1496 aa35.76■■■■□ 3.32
CWC15-203ENST00000542165 ERICH3Q5RHP9 1530 aa35.64■■■■□ 3.3
CWC15-203ENST00000542165 ADAMTS12P58397 1594 aa35.57■■■■□ 3.28
CWC15-203ENST00000542165 FHAD1B1AJZ9 1412 aa35.55■■■■□ 3.28
CWC15-203ENST00000542165 RIMBP3CA6NJZ7 1639 aa35.53■■■■□ 3.28
CWC15-203ENST00000542165 RIMBP3BA6NNM3 1639 aa35.53■■■■□ 3.28
CWC15-203ENST00000542165 RIMBP3Q9UFD9 1639 aa35.53■■■■□ 3.28
CWC15-203ENST00000542165 ARHGEF11O15085 1522 aa35.52■■■■□ 3.28
CWC15-203ENST00000542165 KIF27Q86VH2 1401 aa35.51■■■■□ 3.28
CWC15-203ENST00000542165 CLASP1Q7Z460 1538 aa35.5■■■■□ 3.27
CWC15-203ENST00000542165 GRIN2AQ12879 1464 aa35.49■■■■□ 3.27
CWC15-203ENST00000542165 TRIM41Q8WV44 630 aa35.45■■■■□ 3.27
CWC15-203ENST00000542165 NUP160Q12769 1436 aa35.33■■■■□ 3.25
CWC15-203ENST00000542165 IGF1RP08069 1367 aa35.3■■■■□ 3.24
CWC15-203ENST00000542165 CUL7Q14999 1698 aa35.3■■■■□ 3.24
CWC15-203ENST00000542165 CEP170Q5SW79 1584 aa35.28■■■■□ 3.24
CWC15-203ENST00000542165 CYB5RLQ6IPT4 315 aa35.2■■■■□ 3.23
CWC15-203ENST00000542165 ARAP1Q96P48 1450 aa35.2■■■■□ 3.23
CWC15-203ENST00000542165 CARMIL1Q5VZK9 1371 aa35.13■■■■□ 3.21
CWC15-203ENST00000542165 SHROOM2Q13796 1616 aa35.07■■■■□ 3.21
CWC15-203ENST00000542165 RUSC2Q8N2Y8 1516 aa35.05■■■■□ 3.2
CWC15-203ENST00000542165 KIAA0586Q9BVV6 1533 aa34.98■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms