RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 NISCHQ9Y2I1 1504 aa42.74■■■■■ 4.43
TRPT1-212ENST00000542040 CCDC180Q9P1Z9 1646 aa38.19■■■■□ 3.7
TRPT1-212ENST00000542040 ABCC9O60706 1549 aa37.87■■■■□ 3.65
TRPT1-212ENST00000542040 RB1CC1Q8TDY2 1594 aa36.29■■■■□ 3.4
TRPT1-212ENST00000542040 DCAF8L2P0C7V8 631 aa36.15■■■■□ 3.38
TRPT1-212ENST00000542040 NACADO15069 1562 aa36.13■■■■□ 3.37
TRPT1-212ENST00000542040 MYO15BQ96JP2 1530 aa35.75■■■■□ 3.31
TRPT1-212ENST00000542040 ZCCHC6Q5VYS8 1495 aaKnown RBP35.45■■■■□ 3.27
TRPT1-212ENST00000542040 DCAF1Q9Y4B6 1507 aa35.38■■■■□ 3.25
TRPT1-212ENST00000542040 PABPN1Q86U42 306 aaKnown RBP eCLIP35.36■■■■□ 3.25
TRPT1-212ENST00000542040 UNC13AQ9UPW8 1703 aa35.16■■■■□ 3.22
TRPT1-212ENST00000542040 DNAJC5BQ9UF47 199 aa35.14■■■■□ 3.22
TRPT1-212ENST00000542040 BICRAQ9NZM4 1560 aa34.99■■■■□ 3.19
TRPT1-212ENST00000542040 SHROOM4Q9ULL8 1493 aa34.84■■■■□ 3.17
TRPT1-212ENST00000542040 SCRIBQ14160 1630 aa34.77■■■■□ 3.16
TRPT1-212ENST00000542040 EIF4G1Q04637 1599 aaKnown RBP34.22■■■■□ 3.07
TRPT1-212ENST00000542040 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
TRPT1-212ENST00000542040 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
TRPT1-212ENST00000542040 NCAPD3P42695 1498 aa33.33■■■□□ 2.93
TRPT1-212ENST00000542040 SMARCA2P51531 1590 aa33.24■■■□□ 2.91
TRPT1-212ENST00000542040 ATAD2BQ9ULI0 1458 aa33.23■■■□□ 2.91
TRPT1-212ENST00000542040 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
TRPT1-212ENST00000542040 SMARCA4P51532 1647 aa33.21■■■□□ 2.91
TRPT1-212ENST00000542040 HMGXB3Q12766 1538 aa33.07■■■□□ 2.89
TRPT1-212ENST00000542040 BAZ1BQ9UIG0 1483 aaKnown RBP32.99■■■□□ 2.87
TRPT1-212ENST00000542040 PEG3Q9GZU2 1588 aa32.92■■■□□ 2.86
TRPT1-212ENST00000542040 MROH2BQ7Z745 1585 aa32.85■■■□□ 2.85
TRPT1-212ENST00000542040 ERCC6Q03468 1493 aa32.83■■■□□ 2.85
TRPT1-212ENST00000542040 CUX2O14529 1486 aa32.62■■■□□ 2.81
TRPT1-212ENST00000542040 NESP48681 1621 aa32.54■■■□□ 2.8
TRPT1-212ENST00000542040 LAMC3Q9Y6N6 1575 aa32.53■■■□□ 2.8
TRPT1-212ENST00000542040 PDS5BQ9NTI5 1447 aa32.45■■■□□ 2.79
TRPT1-212ENST00000542040 WIZO95785 1651 aa32.45■■■□□ 2.79
TRPT1-212ENST00000542040 CADPSQ9ULU8 1353 aa32.38■■■□□ 2.77
TRPT1-212ENST00000542040 RSF1Q96T23 1441 aaPredicted RBP32.37■■■□□ 2.77
TRPT1-212ENST00000542040 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
TRPT1-212ENST00000542040 TOP2AP11388 1531 aaKnown RBP32.17■■■□□ 2.74
TRPT1-212ENST00000542040 THOC2Q8NI27 1593 aaKnown RBP32.13■■■□□ 2.73
TRPT1-212ENST00000542040 KIF21AQ7Z4S6 1674 aa32.09■■■□□ 2.73
TRPT1-212ENST00000542040 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
TRPT1-212ENST00000542040 CFTRP13569 1480 aa32.02■■■□□ 2.72
TRPT1-212ENST00000542040 CEP164Q9UPV0 1460 aa31.99■■■□□ 2.71
TRPT1-212ENST00000542040 FANCD2Q9BXW9 1451 aa31.96■■■□□ 2.71
TRPT1-212ENST00000542040 WDR62O43379 1518 aa31.87■■■□□ 2.69
TRPT1-212ENST00000542040 CCDC88BA6NC98 1476 aa31.8■■■□□ 2.68
TRPT1-212ENST00000542040 PRDM2Q13029 1718 aa31.59■■■□□ 2.65
TRPT1-212ENST00000542040 URB2Q14146 1524 aaKnown RBP31.57■■■□□ 2.64
TRPT1-212ENST00000542040 ABCC8Q09428 1581 aa31.51■■■□□ 2.63
TRPT1-212ENST00000542040 IFT140Q96RY7 1462 aa31.37■■■□□ 2.61
TRPT1-212ENST00000542040 TOPBP1Q92547 1522 aa31.34■■■□□ 2.61
TRPT1-212ENST00000542040 SUPT5HO00267 1087 aaKnown RBP31.32■■■□□ 2.6
TRPT1-212ENST00000542040 OSCARQ8IYS5 282 aa31.31■■■□□ 2.6
TRPT1-212ENST00000542040 DNMBPQ6XZF7 1577 aa31.27■■■□□ 2.6
TRPT1-212ENST00000542040 ZNF608Q9ULD9 1512 aaPredicted RBP31.11■■■□□ 2.57
TRPT1-212ENST00000542040 POLA1P09884 1462 aaPredicted RBP31.03■■■□□ 2.56
TRPT1-212ENST00000542040 SOGA1O94964 1423 aa31.02■■■□□ 2.56
TRPT1-212ENST00000542040 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
TRPT1-212ENST00000542040 EIF4G3O43432 1585 aaKnown RBP30.96■■■□□ 2.55
TRPT1-212ENST00000542040 AQRO60306 1485 aaKnown RBP eCLIP30.95■■■□□ 2.556e-9■■■■■ 37.6
TRPT1-212ENST00000542040 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.55
TRPT1-212ENST00000542040 FGD5Q6ZNL6 1462 aa30.89■■■□□ 2.54
TRPT1-212ENST00000542040 RAD54L2Q9Y4B4 1467 aa30.89■■■□□ 2.54
TRPT1-212ENST00000542040 FBLN2P98095 1184 aa30.87■■■□□ 2.53
TRPT1-212ENST00000542040 CUX1P39880 1505 aa30.86■■■□□ 2.53
TRPT1-212ENST00000542040 WDR97A6NE52 1622 aa30.85■■■□□ 2.53
TRPT1-212ENST00000542040 TDRD9Q8NDG6 1382 aaKnown RBP30.85■■■□□ 2.53
TRPT1-212ENST00000542040 CHMP7Q8WUX9 453 aaPredicted RBP30.73■■■□□ 2.51
TRPT1-212ENST00000542040 GRIN2BQ13224 1484 aa30.7■■■□□ 2.51
TRPT1-212ENST00000542040 MAGI1Q96QZ7 1491 aaPredicted RBP30.67■■■□□ 2.5
TRPT1-212ENST00000542040 WRNQ14191 1432 aaPredicted RBP eCLIP30.65■■■□□ 2.5
TRPT1-212ENST00000542040 SNAPC4Q5SXM2 1469 aa30.65■■■□□ 2.5
TRPT1-212ENST00000542040 GAPVD1Q14C86 1478 aa30.62■■■□□ 2.49
TRPT1-212ENST00000542040 CHD1O14646 1710 aa30.61■■■□□ 2.49
TRPT1-212ENST00000542040 ABCA10Q8WWZ4 1543 aa30.61■■■□□ 2.49
TRPT1-212ENST00000542040 RIMBP3CA6NJZ7 1639 aa30.59■■■□□ 2.49
TRPT1-212ENST00000542040 RIMBP3BA6NNM3 1639 aa30.59■■■□□ 2.49
TRPT1-212ENST00000542040 RIMBP3Q9UFD9 1639 aa30.59■■■□□ 2.49
TRPT1-212ENST00000542040 ARHGEF11O15085 1522 aa30.58■■■□□ 2.49
TRPT1-212ENST00000542040 SYNJ2O15056 1496 aa30.54■■■□□ 2.48
TRPT1-212ENST00000542040 TOP2BQ02880 1626 aa30.51■■■□□ 2.47
TRPT1-212ENST00000542040 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
TRPT1-212ENST00000542040 CYB5RLQ6IPT4 315 aa30.49■■■□□ 2.47
TRPT1-212ENST00000542040 BIVM-ERCC5R4GMW8 1640 aa30.46■■■□□ 2.47
TRPT1-212ENST00000542040 ABCA5Q8WWZ7 1642 aa30.42■■■□□ 2.46
TRPT1-212ENST00000542040 PBRM1Q86U86 1689 aa30.42■■■□□ 2.46
TRPT1-212ENST00000542040 CLASP1Q7Z460 1538 aa30.33■■■□□ 2.45
TRPT1-212ENST00000542040 FHAD1B1AJZ9 1412 aa30.28■■■□□ 2.44
TRPT1-212ENST00000542040 ARAP1Q96P48 1450 aa30.26■■■□□ 2.44
TRPT1-212ENST00000542040 ERICH3Q5RHP9 1530 aa30.26■■■□□ 2.43
TRPT1-212ENST00000542040 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
TRPT1-212ENST00000542040 ADAMTS12P58397 1594 aa30.19■■■□□ 2.42
TRPT1-212ENST00000542040 TRHP20396 242 aaPredicted RBP30.13■■■□□ 2.41
TRPT1-212ENST00000542040 NUP160Q12769 1436 aa30.12■■■□□ 2.41
TRPT1-212ENST00000542040 KIF27Q86VH2 1401 aa30.09■■■□□ 2.41
TRPT1-212ENST00000542040 CEP170Q5SW79 1584 aa30.01■■■□□ 2.39
TRPT1-212ENST00000542040 JPH4Q96JJ6 628 aa29.96■■■□□ 2.39
TRPT1-212ENST00000542040 IGF1RP08069 1367 aa29.95■■■□□ 2.39
TRPT1-212ENST00000542040 PRG4Q92954 1404 aaPredicted RBP29.87■■■□□ 2.37
TRPT1-212ENST00000542040 SHROOM2Q13796 1616 aa29.86■■■□□ 2.37
TRPT1-212ENST00000542040 CUL7Q14999 1698 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms