RNA–Protein interactions for RNA: ENST00000542030.5

KDM2B-214, Transcript of lysine demethylase 2B, humanhuman

TSL 4

Gene KDM2B, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-214ENST00000542030 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
KDM2B-214ENST00000542030 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
KDM2B-214ENST00000542030 ABCC9O60706 1549 aa30.78■■■□□ 2.52
KDM2B-214ENST00000542030 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
KDM2B-214ENST00000542030 NACADO15069 1562 aa29.35■■■□□ 2.29
KDM2B-214ENST00000542030 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
KDM2B-214ENST00000542030 MYO15BQ96JP2 1530 aa29.1■■■□□ 2.25
KDM2B-214ENST00000542030 ZCCHC6Q5VYS8 1495 aaKnown RBP29.01■■■□□ 2.23
KDM2B-214ENST00000542030 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
KDM2B-214ENST00000542030 PABPN1Q86U42 306 aaKnown RBP eCLIP28.76■■■□□ 2.19
KDM2B-214ENST00000542030 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
KDM2B-214ENST00000542030 DNAJC5BQ9UF47 199 aa28.6■■■□□ 2.17
KDM2B-214ENST00000542030 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
KDM2B-214ENST00000542030 SCRIBQ14160 1630 aa28.38■■■□□ 2.13
KDM2B-214ENST00000542030 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
KDM2B-214ENST00000542030 EIF4G1Q04637 1599 aaKnown RBP27.83■■■□□ 2.05
KDM2B-214ENST00000542030 CC2D2AQ9P2K1 1620 aa27.79■■■□□ 2.04
KDM2B-214ENST00000542030 CECR2Q9BXF3 1484 aa27.68■■■□□ 2.02
KDM2B-214ENST00000542030 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
KDM2B-214ENST00000542030 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
KDM2B-214ENST00000542030 ATAD2BQ9ULI0 1458 aa27.1■■□□□ 1.93
KDM2B-214ENST00000542030 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
KDM2B-214ENST00000542030 SMARCA2P51531 1590 aa27■■□□□ 1.91
KDM2B-214ENST00000542030 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
KDM2B-214ENST00000542030 HMGXB3Q12766 1538 aa26.91■■□□□ 1.9
KDM2B-214ENST00000542030 PEG3Q9GZU2 1588 aa26.87■■□□□ 1.89
KDM2B-214ENST00000542030 BAZ1BQ9UIG0 1483 aaKnown RBP26.82■■□□□ 1.88
KDM2B-214ENST00000542030 WIZO95785 1651 aa26.57■■□□□ 1.84
KDM2B-214ENST00000542030 NESP48681 1621 aa26.56■■□□□ 1.84
KDM2B-214ENST00000542030 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
KDM2B-214ENST00000542030 ERCC6Q03468 1493 aa26.51■■□□□ 1.83
KDM2B-214ENST00000542030 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.82
KDM2B-214ENST00000542030 CUX2O14529 1486 aa26.34■■□□□ 1.81
KDM2B-214ENST00000542030 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.8
KDM2B-214ENST00000542030 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
KDM2B-214ENST00000542030 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
KDM2B-214ENST00000542030 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
KDM2B-214ENST00000542030 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
KDM2B-214ENST00000542030 CFTRP13569 1480 aa26.1■■□□□ 1.77
KDM2B-214ENST00000542030 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
KDM2B-214ENST00000542030 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
KDM2B-214ENST00000542030 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
KDM2B-214ENST00000542030 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
KDM2B-214ENST00000542030 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
KDM2B-214ENST00000542030 WDR62O43379 1518 aa25.92■■□□□ 1.74
KDM2B-214ENST00000542030 URB2Q14146 1524 aaKnown RBP25.76■■□□□ 1.71
KDM2B-214ENST00000542030 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
KDM2B-214ENST00000542030 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
KDM2B-214ENST00000542030 TOPBP1Q92547 1522 aa25.55■■□□□ 1.68
KDM2B-214ENST00000542030 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
KDM2B-214ENST00000542030 DNMBPQ6XZF7 1577 aa25.47■■□□□ 1.67
KDM2B-214ENST00000542030 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
KDM2B-214ENST00000542030 ZNF608Q9ULD9 1512 aaPredicted RBP25.39■■□□□ 1.66
KDM2B-214ENST00000542030 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
KDM2B-214ENST00000542030 TARBP1Q13395 1621 aaKnown RBP25.27■■□□□ 1.64
KDM2B-214ENST00000542030 OSCARQ8IYS5 282 aa25.26■■□□□ 1.63
KDM2B-214ENST00000542030 CUX1P39880 1505 aa25.26■■□□□ 1.63
KDM2B-214ENST00000542030 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
KDM2B-214ENST00000542030 SOGA1O94964 1423 aa25.23■■□□□ 1.63
KDM2B-214ENST00000542030 AQRO60306 1485 aaKnown RBP eCLIP25.22■■□□□ 1.63
KDM2B-214ENST00000542030 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
KDM2B-214ENST00000542030 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
KDM2B-214ENST00000542030 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
KDM2B-214ENST00000542030 WDR97A6NE52 1622 aa25.01■■□□□ 1.59
KDM2B-214ENST00000542030 WRNQ14191 1432 aaPredicted RBP eCLIP24.99■■□□□ 1.59
KDM2B-214ENST00000542030 FBLN2P98095 1184 aa24.96■■□□□ 1.59
KDM2B-214ENST00000542030 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
KDM2B-214ENST00000542030 SNAPC4Q5SXM2 1469 aa24.95■■□□□ 1.58
KDM2B-214ENST00000542030 GRIN2BQ13224 1484 aa24.94■■□□□ 1.58
KDM2B-214ENST00000542030 TRIM41Q8WV44 630 aa24.93■■□□□ 1.58
KDM2B-214ENST00000542030 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
KDM2B-214ENST00000542030 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
KDM2B-214ENST00000542030 CHD1O14646 1710 aa24.92■■□□□ 1.58
KDM2B-214ENST00000542030 GAPVD1Q14C86 1478 aa24.91■■□□□ 1.58
KDM2B-214ENST00000542030 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
KDM2B-214ENST00000542030 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.58
KDM2B-214ENST00000542030 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
KDM2B-214ENST00000542030 ABCA5Q8WWZ7 1642 aa24.84■■□□□ 1.57
KDM2B-214ENST00000542030 RIMBP3CA6NJZ7 1639 aa24.81■■□□□ 1.56
KDM2B-214ENST00000542030 RIMBP3BA6NNM3 1639 aa24.81■■□□□ 1.56
KDM2B-214ENST00000542030 RIMBP3Q9UFD9 1639 aa24.81■■□□□ 1.56
KDM2B-214ENST00000542030 SYNJ2O15056 1496 aa24.81■■□□□ 1.56
KDM2B-214ENST00000542030 ARHGEF11O15085 1522 aa24.8■■□□□ 1.56
KDM2B-214ENST00000542030 PBRM1Q86U86 1689 aa24.79■■□□□ 1.56
KDM2B-214ENST00000542030 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
KDM2B-214ENST00000542030 CYB5RLQ6IPT4 315 aa24.64■■□□□ 1.54
KDM2B-214ENST00000542030 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
KDM2B-214ENST00000542030 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
KDM2B-214ENST00000542030 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
KDM2B-214ENST00000542030 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
KDM2B-214ENST00000542030 ARAP1Q96P48 1450 aa24.6■■□□□ 1.53
KDM2B-214ENST00000542030 NUP160Q12769 1436 aa24.54■■□□□ 1.52
KDM2B-214ENST00000542030 CEP170Q5SW79 1584 aa24.5■■□□□ 1.51
KDM2B-214ENST00000542030 KIF27Q86VH2 1401 aa24.49■■□□□ 1.51
KDM2B-214ENST00000542030 IGF1RP08069 1367 aa24.48■■□□□ 1.51
KDM2B-214ENST00000542030 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
KDM2B-214ENST00000542030 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
KDM2B-214ENST00000542030 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
KDM2B-214ENST00000542030 CUL7Q14999 1698 aa24.3■■□□□ 1.48
KDM2B-214ENST00000542030 CARMIL1Q5VZK9 1371 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms