RNA–Protein interactions for RNA: ENST00000542027.3

C16orf62-214, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 5

Gene C16orf62, Length 1,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-214ENST00000542027 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
C16orf62-214ENST00000542027 CCDC180Q9P1Z9 1646 aa25.74■■□□□ 1.71
C16orf62-214ENST00000542027 ABCC9O60706 1549 aa24.86■■□□□ 1.57
C16orf62-214ENST00000542027 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
C16orf62-214ENST00000542027 ZCCHC6Q5VYS8 1495 aaKnown RBP24.55■■□□□ 1.52
C16orf62-214ENST00000542027 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
C16orf62-214ENST00000542027 NACADO15069 1562 aa24.15■■□□□ 1.46
C16orf62-214ENST00000542027 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
C16orf62-214ENST00000542027 RB1CC1Q8TDY2 1594 aa24.05■■□□□ 1.44
C16orf62-214ENST00000542027 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
C16orf62-214ENST00000542027 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
C16orf62-214ENST00000542027 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
C16orf62-214ENST00000542027 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
C16orf62-214ENST00000542027 BICRAQ9NZM4 1560 aa23.28■■□□□ 1.32
C16orf62-214ENST00000542027 CECR2Q9BXF3 1484 aa22.88■■□□□ 1.25
C16orf62-214ENST00000542027 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
C16orf62-214ENST00000542027 SUPT5HO00267 1087 aaKnown RBP22.68■■□□□ 1.22
C16orf62-214ENST00000542027 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
C16orf62-214ENST00000542027 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
C16orf62-214ENST00000542027 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
C16orf62-214ENST00000542027 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
C16orf62-214ENST00000542027 WIZO95785 1651 aa22.44■■□□□ 1.18
C16orf62-214ENST00000542027 CC2D2AQ9P2K1 1620 aa22.43■■□□□ 1.18
C16orf62-214ENST00000542027 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
C16orf62-214ENST00000542027 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
C16orf62-214ENST00000542027 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
C16orf62-214ENST00000542027 PEG3Q9GZU2 1588 aa22.36■■□□□ 1.17
C16orf62-214ENST00000542027 NCAPD3P42695 1498 aa22.32■■□□□ 1.16
C16orf62-214ENST00000542027 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
C16orf62-214ENST00000542027 TOP2AP11388 1531 aaKnown RBP22.2■■□□□ 1.14
C16orf62-214ENST00000542027 HMGXB3Q12766 1538 aa22.19■■□□□ 1.14
C16orf62-214ENST00000542027 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
C16orf62-214ENST00000542027 CADPSQ9ULU8 1353 aa21.75■■□□□ 1.07
C16orf62-214ENST00000542027 CFTRP13569 1480 aa21.69■■□□□ 1.06
C16orf62-214ENST00000542027 NESP48681 1621 aa21.66■■□□□ 1.06
C16orf62-214ENST00000542027 LAMC3Q9Y6N6 1575 aa21.59■■□□□ 1.05
C16orf62-214ENST00000542027 PDS5BQ9NTI5 1447 aa21.52■■□□□ 1.04
C16orf62-214ENST00000542027 FANCD2Q9BXW9 1451 aa21.48■■□□□ 1.03
C16orf62-214ENST00000542027 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
C16orf62-214ENST00000542027 PRDM2Q13029 1718 aa21.4■■□□□ 1.02
C16orf62-214ENST00000542027 ERCC6Q03468 1493 aa21.39■■□□□ 1.01
C16orf62-214ENST00000542027 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
C16orf62-214ENST00000542027 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
C16orf62-214ENST00000542027 TRIM41Q8WV44 630 aa21.35■■□□□ 1.01
C16orf62-214ENST00000542027 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1.01
C16orf62-214ENST00000542027 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
C16orf62-214ENST00000542027 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
C16orf62-214ENST00000542027 CUX1P39880 1505 aa21.22■□□□□ 0.99
C16orf62-214ENST00000542027 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
C16orf62-214ENST00000542027 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
C16orf62-214ENST00000542027 TOPBP1Q92547 1522 aa21.17■□□□□ 0.98
C16orf62-214ENST00000542027 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
C16orf62-214ENST00000542027 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
C16orf62-214ENST00000542027 BIVM-ERCC5R4GMW8 1640 aa21.1■□□□□ 0.97
C16orf62-214ENST00000542027 WDR62O43379 1518 aa21.09■□□□□ 0.97
C16orf62-214ENST00000542027 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.97
C16orf62-214ENST00000542027 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.97
C16orf62-214ENST00000542027 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
C16orf62-214ENST00000542027 SOGA1O94964 1423 aa21.03■□□□□ 0.96
C16orf62-214ENST00000542027 RAD54L2Q9Y4B4 1467 aa21■□□□□ 0.95
C16orf62-214ENST00000542027 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
C16orf62-214ENST00000542027 CUX2O14529 1486 aa20.95■□□□□ 0.94
C16orf62-214ENST00000542027 IFT140Q96RY7 1462 aa20.91■□□□□ 0.94
C16orf62-214ENST00000542027 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
C16orf62-214ENST00000542027 ABCA10Q8WWZ4 1543 aa20.87■□□□□ 0.93
C16orf62-214ENST00000542027 RUSC2Q8N2Y8 1516 aa20.86■□□□□ 0.93
C16orf62-214ENST00000542027 KIF27Q86VH2 1401 aa20.85■□□□□ 0.93
C16orf62-214ENST00000542027 TARBP1Q13395 1621 aaKnown RBP20.85■□□□□ 0.93
C16orf62-214ENST00000542027 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
C16orf62-214ENST00000542027 ZNF608Q9ULD9 1512 aaPredicted RBP20.8■□□□□ 0.92
C16orf62-214ENST00000542027 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.92
C16orf62-214ENST00000542027 EEA1Q15075 1411 aa20.78■□□□□ 0.92
C16orf62-214ENST00000542027 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
C16orf62-214ENST00000542027 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
C16orf62-214ENST00000542027 IGF1RP08069 1367 aa20.73■□□□□ 0.91
C16orf62-214ENST00000542027 EHMT2Q96KQ7 1210 aa20.7■□□□□ 0.9
C16orf62-214ENST00000542027 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
C16orf62-214ENST00000542027 GRIN2BQ13224 1484 aa20.67■□□□□ 0.9
C16orf62-214ENST00000542027 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
C16orf62-214ENST00000542027 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
C16orf62-214ENST00000542027 CARMIL1Q5VZK9 1371 aa20.63■□□□□ 0.89
C16orf62-214ENST00000542027 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
C16orf62-214ENST00000542027 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
C16orf62-214ENST00000542027 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
C16orf62-214ENST00000542027 FBLN2P98095 1184 aa20.56■□□□□ 0.88
C16orf62-214ENST00000542027 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
C16orf62-214ENST00000542027 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
C16orf62-214ENST00000542027 UBTFP17480 764 aaKnown RBP20.53■□□□□ 0.88
C16orf62-214ENST00000542027 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
C16orf62-214ENST00000542027 RAPGEF2Q9Y4G8 1499 aa20.52■□□□□ 0.88
C16orf62-214ENST00000542027 MAGI1Q96QZ7 1491 aaPredicted RBP20.51■□□□□ 0.87
C16orf62-214ENST00000542027 CUL7Q14999 1698 aa20.5■□□□□ 0.87
C16orf62-214ENST00000542027 KIF21BO75037 1637 aa20.47■□□□□ 0.87
C16orf62-214ENST00000542027 GOLGA3Q08378 1498 aa20.47■□□□□ 0.87
C16orf62-214ENST00000542027 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
C16orf62-214ENST00000542027 SYNJ2O15056 1496 aa20.45■□□□□ 0.86
C16orf62-214ENST00000542027 GRIN2AQ12879 1464 aa20.38■□□□□ 0.85
C16orf62-214ENST00000542027 RANGAP1P46060 587 aaPredicted RBP20.36■□□□□ 0.85
C16orf62-214ENST00000542027 TNIKQ9UKE5 1360 aa20.35■□□□□ 0.85
C16orf62-214ENST00000542027 CHD1O14646 1710 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms