RNA–Protein interactions for RNA: ENST00000541964.1

CD6-210, Transcript of CD6 molecule, humanhuman

TSL 3

Gene CD6, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD6-210ENST00000541964 NISCHQ9Y2I1 1504 aa43.64■■■■■ 4.58
CD6-210ENST00000541964 CCDC180Q9P1Z9 1646 aa38.86■■■■□ 3.81
CD6-210ENST00000541964 ABCC9O60706 1549 aa37.89■■■■□ 3.66
CD6-210ENST00000541964 RB1CC1Q8TDY2 1594 aa36.6■■■■□ 3.45
CD6-210ENST00000541964 NACADO15069 1562 aa36.57■■■■□ 3.45
CD6-210ENST00000541964 DCAF8L2P0C7V8 631 aa36.42■■■■□ 3.42
CD6-210ENST00000541964 MYO15BQ96JP2 1530 aa36.42■■■■□ 3.42
CD6-210ENST00000541964 ZCCHC6Q5VYS8 1495 aaKnown RBP36.37■■■■□ 3.41
CD6-210ENST00000541964 DCAF1Q9Y4B6 1507 aa36.22■■■■□ 3.39
CD6-210ENST00000541964 UNC13AQ9UPW8 1703 aa35.56■■■■□ 3.28
CD6-210ENST00000541964 PABPN1Q86U42 306 aaKnown RBP eCLIP35.38■■■■□ 3.25
CD6-210ENST00000541964 BICRAQ9NZM4 1560 aa35.33■■■■□ 3.25
CD6-210ENST00000541964 SCRIBQ14160 1630 aa35.32■■■■□ 3.25
CD6-210ENST00000541964 SHROOM4Q9ULL8 1493 aa35.26■■■■□ 3.23
CD6-210ENST00000541964 DNAJC5BQ9UF47 199 aa34.67■■■■□ 3.14
CD6-210ENST00000541964 EIF4G1Q04637 1599 aaKnown RBP34.49■■■■□ 3.11
CD6-210ENST00000541964 CC2D2AQ9P2K1 1620 aa34.31■■■■□ 3.08
CD6-210ENST00000541964 CECR2Q9BXF3 1484 aa34.13■■■■□ 3.05
CD6-210ENST00000541964 BAZ1AQ9NRL2 1556 aaPredicted RBP33.89■■■■□ 3.02
CD6-210ENST00000541964 SMARCA4P51532 1647 aa33.85■■■■□ 3.01
CD6-210ENST00000541964 SMARCA2P51531 1590 aa33.73■■■□□ 2.99
CD6-210ENST00000541964 NCAPD3P42695 1498 aa33.72■■■□□ 2.99
CD6-210ENST00000541964 ATAD2BQ9ULI0 1458 aa33.69■■■□□ 2.98
CD6-210ENST00000541964 PEG3Q9GZU2 1588 aa33.59■■■□□ 2.97
CD6-210ENST00000541964 HMGXB3Q12766 1538 aa33.57■■■□□ 2.96
CD6-210ENST00000541964 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
CD6-210ENST00000541964 BAZ1BQ9UIG0 1483 aaKnown RBP33.44■■■□□ 2.94
CD6-210ENST00000541964 RSF1Q96T23 1441 aaPredicted RBP33.21■■■□□ 2.91
CD6-210ENST00000541964 WIZO95785 1651 aa33.17■■■□□ 2.9
CD6-210ENST00000541964 TOP2AP11388 1531 aaKnown RBP32.93■■■□□ 2.86
CD6-210ENST00000541964 LAMC3Q9Y6N6 1575 aa32.85■■■□□ 2.85
CD6-210ENST00000541964 ERCC6Q03468 1493 aa32.79■■■□□ 2.84
CD6-210ENST00000541964 NESP48681 1621 aa32.73■■■□□ 2.83
CD6-210ENST00000541964 CADPSQ9ULU8 1353 aa32.73■■■□□ 2.83
CD6-210ENST00000541964 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
CD6-210ENST00000541964 CFTRP13569 1480 aa32.53■■■□□ 2.8
CD6-210ENST00000541964 CCDC88BA6NC98 1476 aa32.49■■■□□ 2.79
CD6-210ENST00000541964 CUX2O14529 1486 aa32.49■■■□□ 2.79
CD6-210ENST00000541964 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
CD6-210ENST00000541964 FANCD2Q9BXW9 1451 aa32.33■■■□□ 2.77
CD6-210ENST00000541964 CEP164Q9UPV0 1460 aa32.32■■■□□ 2.76
CD6-210ENST00000541964 SUPT5HO00267 1087 aaKnown RBP32.32■■■□□ 2.76
CD6-210ENST00000541964 THOC2Q8NI27 1593 aaKnown RBP32.32■■■□□ 2.76
CD6-210ENST00000541964 MRC2Q9UBG0 1479 aa32.27■■■□□ 2.76
CD6-210ENST00000541964 PRDM2Q13029 1718 aa32.24■■■□□ 2.75
CD6-210ENST00000541964 WDR62O43379 1518 aa32.15■■■□□ 2.74
CD6-210ENST00000541964 ABCC8Q09428 1581 aa31.95■■■□□ 2.71
CD6-210ENST00000541964 URB2Q14146 1524 aaKnown RBP31.93■■■□□ 2.7
CD6-210ENST00000541964 DNMBPQ6XZF7 1577 aa31.78■■■□□ 2.68
CD6-210ENST00000541964 TOPBP1Q92547 1522 aa31.78■■■□□ 2.68
CD6-210ENST00000541964 IFT140Q96RY7 1462 aa31.67■■■□□ 2.66
CD6-210ENST00000541964 POLA1P09884 1462 aaPredicted RBP31.51■■■□□ 2.63
CD6-210ENST00000541964 CUX1P39880 1505 aa31.49■■■□□ 2.63
CD6-210ENST00000541964 FGD5Q6ZNL6 1462 aa31.43■■■□□ 2.62
CD6-210ENST00000541964 SOGA1O94964 1423 aa31.41■■■□□ 2.62
CD6-210ENST00000541964 DNAJC5Q9H3Z4 198 aa31.41■■■□□ 2.62
CD6-210ENST00000541964 TARBP1Q13395 1621 aaKnown RBP31.41■■■□□ 2.62
CD6-210ENST00000541964 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.61
CD6-210ENST00000541964 ZNF608Q9ULD9 1512 aaPredicted RBP31.36■■■□□ 2.61
CD6-210ENST00000541964 WDR97A6NE52 1622 aa31.35■■■□□ 2.61
CD6-210ENST00000541964 RAD54L2Q9Y4B4 1467 aa31.3■■■□□ 2.6
CD6-210ENST00000541964 EIF4G3O43432 1585 aaKnown RBP31.3■■■□□ 2.6
CD6-210ENST00000541964 TOP2BQ02880 1626 aa31.29■■■□□ 2.6
CD6-210ENST00000541964 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
CD6-210ENST00000541964 AQRO60306 1485 aaKnown RBP eCLIP31.22■■■□□ 2.59
CD6-210ENST00000541964 SYNJ1O43426 1573 aa31.19■■■□□ 2.58
CD6-210ENST00000541964 ABCA10Q8WWZ4 1543 aa31.18■■■□□ 2.58
CD6-210ENST00000541964 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
CD6-210ENST00000541964 OSCARQ8IYS5 282 aa31.13■■■□□ 2.57
CD6-210ENST00000541964 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
CD6-210ENST00000541964 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
CD6-210ENST00000541964 MAGI1Q96QZ7 1491 aaPredicted RBP31.03■■■□□ 2.56
CD6-210ENST00000541964 ABCA5Q8WWZ7 1642 aa31■■■□□ 2.55
CD6-210ENST00000541964 SNAPC4Q5SXM2 1469 aa30.97■■■□□ 2.55
CD6-210ENST00000541964 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
CD6-210ENST00000541964 FBLN2P98095 1184 aa30.9■■■□□ 2.54
CD6-210ENST00000541964 SYNJ2O15056 1496 aa30.89■■■□□ 2.53
CD6-210ENST00000541964 CHMP7Q8WUX9 453 aaPredicted RBP30.88■■■□□ 2.53
CD6-210ENST00000541964 CHD1O14646 1710 aa30.85■■■□□ 2.53
CD6-210ENST00000541964 ERICH3Q5RHP9 1530 aa30.84■■■□□ 2.53
CD6-210ENST00000541964 KIF27Q86VH2 1401 aa30.78■■■□□ 2.52
CD6-210ENST00000541964 FHAD1B1AJZ9 1412 aa30.73■■■□□ 2.51
CD6-210ENST00000541964 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
CD6-210ENST00000541964 GRIN2AQ12879 1464 aa30.65■■■□□ 2.5
CD6-210ENST00000541964 TRIM41Q8WV44 630 aa30.64■■■□□ 2.5
CD6-210ENST00000541964 CLASP1Q7Z460 1538 aa30.58■■■□□ 2.49
CD6-210ENST00000541964 IGF1RP08069 1367 aa30.56■■■□□ 2.48
CD6-210ENST00000541964 CUL7Q14999 1698 aa30.55■■■□□ 2.48
CD6-210ENST00000541964 ARHGEF11O15085 1522 aa30.54■■■□□ 2.48
CD6-210ENST00000541964 NUP160Q12769 1436 aa30.53■■■□□ 2.48
CD6-210ENST00000541964 RIMBP3CA6NJZ7 1639 aa30.5■■■□□ 2.47
CD6-210ENST00000541964 RIMBP3BA6NNM3 1639 aa30.5■■■□□ 2.47
CD6-210ENST00000541964 RIMBP3Q9UFD9 1639 aa30.5■■■□□ 2.47
CD6-210ENST00000541964 CARMIL1Q5VZK9 1371 aa30.42■■■□□ 2.46
CD6-210ENST00000541964 CEP170Q5SW79 1584 aa30.42■■■□□ 2.46
CD6-210ENST00000541964 KIAA0586Q9BVV6 1533 aa30.27■■■□□ 2.44
CD6-210ENST00000541964 RAPGEF2Q9Y4G8 1499 aa30.26■■■□□ 2.44
CD6-210ENST00000541964 SHROOM2Q13796 1616 aa30.26■■■□□ 2.44
CD6-210ENST00000541964 RUSC2Q8N2Y8 1516 aa30.26■■■□□ 2.43
CD6-210ENST00000541964 ARAP1Q96P48 1450 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms