RNA–Protein interactions for RNA: ENST00000541901.5

MAP3K4-211, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 5

Gene MAP3K4, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-211ENST00000541901 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
MAP3K4-211ENST00000541901 CCDC180Q9P1Z9 1646 aa26.83■■□□□ 1.88
MAP3K4-211ENST00000541901 ABCC9O60706 1549 aa26.41■■□□□ 1.82
MAP3K4-211ENST00000541901 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
MAP3K4-211ENST00000541901 NACADO15069 1562 aa25.28■■□□□ 1.64
MAP3K4-211ENST00000541901 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
MAP3K4-211ENST00000541901 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
MAP3K4-211ENST00000541901 MYO15BQ96JP2 1530 aa25.14■■□□□ 1.62
MAP3K4-211ENST00000541901 DCAF1Q9Y4B6 1507 aa24.99■■□□□ 1.59
MAP3K4-211ENST00000541901 UNC13AQ9UPW8 1703 aa24.76■■□□□ 1.55
MAP3K4-211ENST00000541901 PABPN1Q86U42 306 aaKnown RBP eCLIP24.7■■□□□ 1.54
MAP3K4-211ENST00000541901 BICRAQ9NZM4 1560 aa24.66■■□□□ 1.54
MAP3K4-211ENST00000541901 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
MAP3K4-211ENST00000541901 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
MAP3K4-211ENST00000541901 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
MAP3K4-211ENST00000541901 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.43
MAP3K4-211ENST00000541901 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
MAP3K4-211ENST00000541901 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
MAP3K4-211ENST00000541901 SMARCA4P51532 1647 aa23.43■■□□□ 1.34
MAP3K4-211ENST00000541901 NCAPD3P42695 1498 aa23.39■■□□□ 1.34
MAP3K4-211ENST00000541901 ATAD2BQ9ULI0 1458 aa23.38■■□□□ 1.33
MAP3K4-211ENST00000541901 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
MAP3K4-211ENST00000541901 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
MAP3K4-211ENST00000541901 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
MAP3K4-211ENST00000541901 PEG3Q9GZU2 1588 aa23.25■■□□□ 1.31
MAP3K4-211ENST00000541901 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
MAP3K4-211ENST00000541901 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
MAP3K4-211ENST00000541901 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
MAP3K4-211ENST00000541901 WIZO95785 1651 aa23■■□□□ 1.27
MAP3K4-211ENST00000541901 NESP48681 1621 aa22.86■■□□□ 1.25
MAP3K4-211ENST00000541901 TOP2AP11388 1531 aaKnown RBP22.74■■□□□ 1.23
MAP3K4-211ENST00000541901 LAMC3Q9Y6N6 1575 aa22.72■■□□□ 1.23
MAP3K4-211ENST00000541901 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
MAP3K4-211ENST00000541901 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
MAP3K4-211ENST00000541901 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
MAP3K4-211ENST00000541901 CUX2O14529 1486 aa22.55■■□□□ 1.2
MAP3K4-211ENST00000541901 CFTRP13569 1480 aa22.54■■□□□ 1.2
MAP3K4-211ENST00000541901 CCDC88BA6NC98 1476 aa22.52■■□□□ 1.2
MAP3K4-211ENST00000541901 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
MAP3K4-211ENST00000541901 THOC2Q8NI27 1593 aaKnown RBP22.5■■□□□ 1.19
MAP3K4-211ENST00000541901 FANCD2Q9BXW9 1451 aa22.39■■□□□ 1.17
MAP3K4-211ENST00000541901 MRC2Q9UBG0 1479 aa22.36■■□□□ 1.17
MAP3K4-211ENST00000541901 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
MAP3K4-211ENST00000541901 WDR62O43379 1518 aa22.31■■□□□ 1.16
MAP3K4-211ENST00000541901 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
MAP3K4-211ENST00000541901 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
MAP3K4-211ENST00000541901 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
MAP3K4-211ENST00000541901 DNAJC5Q9H3Z4 198 aa22.07■■□□□ 1.12
MAP3K4-211ENST00000541901 TOPBP1Q92547 1522 aa22.04■■□□□ 1.12
MAP3K4-211ENST00000541901 ABCC8Q09428 1581 aa21.97■■□□□ 1.11
MAP3K4-211ENST00000541901 DNMBPQ6XZF7 1577 aa21.97■■□□□ 1.11
MAP3K4-211ENST00000541901 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
MAP3K4-211ENST00000541901 ZNF608Q9ULD9 1512 aaPredicted RBP21.87■■□□□ 1.09
MAP3K4-211ENST00000541901 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
MAP3K4-211ENST00000541901 CUX1P39880 1505 aa21.85■■□□□ 1.09
MAP3K4-211ENST00000541901 TARBP1Q13395 1621 aaKnown RBP21.82■■□□□ 1.08
MAP3K4-211ENST00000541901 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.08
MAP3K4-211ENST00000541901 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.07
MAP3K4-211ENST00000541901 SOGA1O94964 1423 aa21.74■■□□□ 1.07
MAP3K4-211ENST00000541901 AQRO60306 1485 aaKnown RBP eCLIP21.72■■□□□ 1.072e-6■■■■□ 23.9
MAP3K4-211ENST00000541901 EIF4G3O43432 1585 aaKnown RBP21.71■■□□□ 1.07
MAP3K4-211ENST00000541901 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
MAP3K4-211ENST00000541901 WRNQ14191 1432 aaPredicted RBP eCLIP21.63■■□□□ 1.05
MAP3K4-211ENST00000541901 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
MAP3K4-211ENST00000541901 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
MAP3K4-211ENST00000541901 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
MAP3K4-211ENST00000541901 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.05
MAP3K4-211ENST00000541901 WDR97A6NE52 1622 aa21.58■■□□□ 1.04
MAP3K4-211ENST00000541901 ABCA10Q8WWZ4 1543 aa21.57■■□□□ 1.04
MAP3K4-211ENST00000541901 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
MAP3K4-211ENST00000541901 GAPVD1Q14C86 1478 aa21.48■■□□□ 1.03
MAP3K4-211ENST00000541901 SNAPC4Q5SXM2 1469 aa21.48■■□□□ 1.03
MAP3K4-211ENST00000541901 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
MAP3K4-211ENST00000541901 MAGI1Q96QZ7 1491 aaPredicted RBP21.44■■□□□ 1.02
MAP3K4-211ENST00000541901 CHD1O14646 1710 aa21.43■■□□□ 1.02
MAP3K4-211ENST00000541901 FBLN2P98095 1184 aa21.39■■□□□ 1.01
MAP3K4-211ENST00000541901 PBRM1Q86U86 1689 aa21.38■■□□□ 1.01
MAP3K4-211ENST00000541901 SYNJ2O15056 1496 aa21.37■■□□□ 1.01
MAP3K4-211ENST00000541901 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
MAP3K4-211ENST00000541901 CLASP1Q7Z460 1538 aa21.28■■□□□ 1
MAP3K4-211ENST00000541901 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
MAP3K4-211ENST00000541901 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
MAP3K4-211ENST00000541901 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
MAP3K4-211ENST00000541901 ERICH3Q5RHP9 1530 aa21.27■■□□□ 1
MAP3K4-211ENST00000541901 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
MAP3K4-211ENST00000541901 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
MAP3K4-211ENST00000541901 FHAD1B1AJZ9 1412 aa21.23■□□□□ 0.99
MAP3K4-211ENST00000541901 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
MAP3K4-211ENST00000541901 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
MAP3K4-211ENST00000541901 IGF1RP08069 1367 aa21.19■□□□□ 0.98
MAP3K4-211ENST00000541901 NUP160Q12769 1436 aa21.17■□□□□ 0.98
MAP3K4-211ENST00000541901 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
MAP3K4-211ENST00000541901 CEP170Q5SW79 1584 aa21.14■□□□□ 0.97
MAP3K4-211ENST00000541901 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
MAP3K4-211ENST00000541901 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
MAP3K4-211ENST00000541901 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
MAP3K4-211ENST00000541901 CUL7Q14999 1698 aa21.01■□□□□ 0.95
MAP3K4-211ENST00000541901 ERCC6L2Q5T890 1561 aa21.01■□□□□ 0.95
MAP3K4-211ENST00000541901 CARMIL1Q5VZK9 1371 aa21■□□□□ 0.95
MAP3K4-211ENST00000541901 SHROOM2Q13796 1616 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms