RNA–Protein interactions for RNA: ENST00000541891.1

DKFZP434K028-203, humanhuman

TSL 3

Gene DKFZP434K028, Length 463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKFZP434K028-203ENST00000541891 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
DKFZP434K028-203ENST00000541891 CCDC180Q9P1Z9 1646 aa25.83■■□□□ 1.73
DKFZP434K028-203ENST00000541891 ABCC9O60706 1549 aa25.47■■□□□ 1.67
DKFZP434K028-203ENST00000541891 RB1CC1Q8TDY2 1594 aa24.45■■□□□ 1.5
DKFZP434K028-203ENST00000541891 NACADO15069 1562 aa24.4■■□□□ 1.5
DKFZP434K028-203ENST00000541891 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
DKFZP434K028-203ENST00000541891 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
DKFZP434K028-203ENST00000541891 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
DKFZP434K028-203ENST00000541891 DCAF1Q9Y4B6 1507 aa24.03■■□□□ 1.44
DKFZP434K028-203ENST00000541891 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
DKFZP434K028-203ENST00000541891 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
DKFZP434K028-203ENST00000541891 DNAJC5BQ9UF47 199 aa23.72■■□□□ 1.39
DKFZP434K028-203ENST00000541891 BICRAQ9NZM4 1560 aa23.72■■□□□ 1.39
DKFZP434K028-203ENST00000541891 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
DKFZP434K028-203ENST00000541891 SCRIBQ14160 1630 aa23.45■■□□□ 1.34
DKFZP434K028-203ENST00000541891 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
DKFZP434K028-203ENST00000541891 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
DKFZP434K028-203ENST00000541891 CECR2Q9BXF3 1484 aa22.97■■□□□ 1.27
DKFZP434K028-203ENST00000541891 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
DKFZP434K028-203ENST00000541891 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
DKFZP434K028-203ENST00000541891 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
DKFZP434K028-203ENST00000541891 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
DKFZP434K028-203ENST00000541891 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
DKFZP434K028-203ENST00000541891 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
DKFZP434K028-203ENST00000541891 PEG3Q9GZU2 1588 aa22.34■■□□□ 1.17
DKFZP434K028-203ENST00000541891 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
DKFZP434K028-203ENST00000541891 BAZ1BQ9UIG0 1483 aaKnown RBP22.23■■□□□ 1.15
DKFZP434K028-203ENST00000541891 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
DKFZP434K028-203ENST00000541891 WIZO95785 1651 aa21.99■■□□□ 1.11
DKFZP434K028-203ENST00000541891 NESP48681 1621 aa21.98■■□□□ 1.11
DKFZP434K028-203ENST00000541891 ERCC6Q03468 1493 aa21.97■■□□□ 1.11
DKFZP434K028-203ENST00000541891 LAMC3Q9Y6N6 1575 aa21.93■■□□□ 1.1
DKFZP434K028-203ENST00000541891 CUX2O14529 1486 aa21.9■■□□□ 1.1
DKFZP434K028-203ENST00000541891 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
DKFZP434K028-203ENST00000541891 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.09
DKFZP434K028-203ENST00000541891 TOP2AP11388 1531 aaKnown RBP21.79■■□□□ 1.08
DKFZP434K028-203ENST00000541891 CFTRP13569 1480 aa21.69■■□□□ 1.06
DKFZP434K028-203ENST00000541891 THOC2Q8NI27 1593 aaKnown RBP21.68■■□□□ 1.06
DKFZP434K028-203ENST00000541891 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
DKFZP434K028-203ENST00000541891 DNAJC5Q9H3Z4 198 aa21.61■■□□□ 1.05
DKFZP434K028-203ENST00000541891 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.04
DKFZP434K028-203ENST00000541891 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
DKFZP434K028-203ENST00000541891 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
DKFZP434K028-203ENST00000541891 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
DKFZP434K028-203ENST00000541891 WDR62O43379 1518 aa21.51■■□□□ 1.03
DKFZP434K028-203ENST00000541891 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
DKFZP434K028-203ENST00000541891 URB2Q14146 1524 aaKnown RBP21.35■■□□□ 1.01
DKFZP434K028-203ENST00000541891 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
DKFZP434K028-203ENST00000541891 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
DKFZP434K028-203ENST00000541891 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
DKFZP434K028-203ENST00000541891 IFT140Q96RY7 1462 aa21.14■□□□□ 0.98
DKFZP434K028-203ENST00000541891 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
DKFZP434K028-203ENST00000541891 ZNF608Q9ULD9 1512 aaPredicted RBP21.03■□□□□ 0.96
DKFZP434K028-203ENST00000541891 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
DKFZP434K028-203ENST00000541891 POLA1P09884 1462 aaPredicted RBP20.99■□□□□ 0.95
DKFZP434K028-203ENST00000541891 TARBP1Q13395 1621 aaKnown RBP20.97■□□□□ 0.95
DKFZP434K028-203ENST00000541891 SOGA1O94964 1423 aa20.94■□□□□ 0.94
DKFZP434K028-203ENST00000541891 CUX1P39880 1505 aa20.92■□□□□ 0.94
DKFZP434K028-203ENST00000541891 AQRO60306 1485 aaKnown RBP eCLIP20.89■□□□□ 0.94
DKFZP434K028-203ENST00000541891 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
DKFZP434K028-203ENST00000541891 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
DKFZP434K028-203ENST00000541891 EIF4G3O43432 1585 aaKnown RBP20.88■□□□□ 0.93
DKFZP434K028-203ENST00000541891 WDR97A6NE52 1622 aa20.83■□□□□ 0.93
DKFZP434K028-203ENST00000541891 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.92
DKFZP434K028-203ENST00000541891 WRNQ14191 1432 aaPredicted RBP eCLIP20.72■□□□□ 0.91
DKFZP434K028-203ENST00000541891 ABCA10Q8WWZ4 1543 aa20.72■□□□□ 0.91
DKFZP434K028-203ENST00000541891 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
DKFZP434K028-203ENST00000541891 TOP2BQ02880 1626 aa20.68■□□□□ 0.9
DKFZP434K028-203ENST00000541891 MAGI1Q96QZ7 1491 aaPredicted RBP20.68■□□□□ 0.9
DKFZP434K028-203ENST00000541891 FBLN2P98095 1184 aa20.67■□□□□ 0.9
DKFZP434K028-203ENST00000541891 GAPVD1Q14C86 1478 aa20.67■□□□□ 0.9
DKFZP434K028-203ENST00000541891 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
DKFZP434K028-203ENST00000541891 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
DKFZP434K028-203ENST00000541891 CHD1O14646 1710 aa20.64■□□□□ 0.89
DKFZP434K028-203ENST00000541891 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
DKFZP434K028-203ENST00000541891 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
DKFZP434K028-203ENST00000541891 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
DKFZP434K028-203ENST00000541891 SYNJ2O15056 1496 aa20.6■□□□□ 0.89
DKFZP434K028-203ENST00000541891 ABCA5Q8WWZ7 1642 aa20.6■□□□□ 0.89
DKFZP434K028-203ENST00000541891 ARHGEF11O15085 1522 aa20.58■□□□□ 0.88
DKFZP434K028-203ENST00000541891 RIMBP3CA6NJZ7 1639 aa20.57■□□□□ 0.88
DKFZP434K028-203ENST00000541891 RIMBP3BA6NNM3 1639 aa20.57■□□□□ 0.88
DKFZP434K028-203ENST00000541891 RIMBP3Q9UFD9 1639 aa20.57■□□□□ 0.88
DKFZP434K028-203ENST00000541891 PBRM1Q86U86 1689 aa20.53■□□□□ 0.88
DKFZP434K028-203ENST00000541891 CLASP1Q7Z460 1538 aa20.49■□□□□ 0.87
DKFZP434K028-203ENST00000541891 ERICH3Q5RHP9 1530 aa20.46■□□□□ 0.87
DKFZP434K028-203ENST00000541891 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
DKFZP434K028-203ENST00000541891 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
DKFZP434K028-203ENST00000541891 GRIN2AQ12879 1464 aa20.42■□□□□ 0.86
DKFZP434K028-203ENST00000541891 ADAMTS12P58397 1594 aa20.4■□□□□ 0.86
DKFZP434K028-203ENST00000541891 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
DKFZP434K028-203ENST00000541891 NUP160Q12769 1436 aa20.38■□□□□ 0.85
DKFZP434K028-203ENST00000541891 KIF27Q86VH2 1401 aa20.33■□□□□ 0.84
DKFZP434K028-203ENST00000541891 IGF1RP08069 1367 aa20.33■□□□□ 0.84
DKFZP434K028-203ENST00000541891 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
DKFZP434K028-203ENST00000541891 SHROOM2Q13796 1616 aa20.22■□□□□ 0.83
DKFZP434K028-203ENST00000541891 JPH4Q96JJ6 628 aa20.21■□□□□ 0.83
DKFZP434K028-203ENST00000541891 CUL7Q14999 1698 aa20.17■□□□□ 0.82
DKFZP434K028-203ENST00000541891 CARMIL1Q5VZK9 1371 aa20.17■□□□□ 0.82
DKFZP434K028-203ENST00000541891 ERCC6L2Q5T890 1561 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms