RNA–Protein interactions for RNA: ENST00000541755.2

ACSF3-212, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 5

Gene ACSF3, Length 477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-212ENST00000541755 NISCHQ9Y2I1 1504 aa40.69■■■■■ 4.1
ACSF3-212ENST00000541755 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
ACSF3-212ENST00000541755 ABCC9O60706 1549 aa36.13■■■■□ 3.38
ACSF3-212ENST00000541755 RB1CC1Q8TDY2 1594 aa34.72■■■■□ 3.15
ACSF3-212ENST00000541755 NACADO15069 1562 aa34.53■■■■□ 3.12
ACSF3-212ENST00000541755 DCAF8L2P0C7V8 631 aa34.28■■■■□ 3.08
ACSF3-212ENST00000541755 MYO15BQ96JP2 1530 aa34.19■■■■□ 3.06
ACSF3-212ENST00000541755 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
ACSF3-212ENST00000541755 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■■□ 3
ACSF3-212ENST00000541755 PABPN1Q86U42 306 aaKnown RBP eCLIP33.61■■■□□ 2.97
ACSF3-212ENST00000541755 UNC13AQ9UPW8 1703 aa33.59■■■□□ 2.97
ACSF3-212ENST00000541755 DNAJC5BQ9UF47 199 aa33.44■■■□□ 2.94
ACSF3-212ENST00000541755 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
ACSF3-212ENST00000541755 BICRAQ9NZM4 1560 aa33.38■■■□□ 2.93
ACSF3-212ENST00000541755 SCRIBQ14160 1630 aa33.12■■■□□ 2.89
ACSF3-212ENST00000541755 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.83
ACSF3-212ENST00000541755 CC2D2AQ9P2K1 1620 aa32.68■■■□□ 2.82
ACSF3-212ENST00000541755 CECR2Q9BXF3 1484 aa32.63■■■□□ 2.81
ACSF3-212ENST00000541755 NCAPD3P42695 1498 aa31.8■■■□□ 2.68
ACSF3-212ENST00000541755 SMARCA2P51531 1590 aa31.77■■■□□ 2.68
ACSF3-212ENST00000541755 BAZ1AQ9NRL2 1556 aaPredicted RBP31.7■■■□□ 2.67
ACSF3-212ENST00000541755 SMARCA4P51532 1647 aa31.67■■■□□ 2.66
ACSF3-212ENST00000541755 ATAD2BQ9ULI0 1458 aa31.66■■■□□ 2.66
ACSF3-212ENST00000541755 HMGXB3Q12766 1538 aa31.64■■■□□ 2.66
ACSF3-212ENST00000541755 BAZ1BQ9UIG0 1483 aaKnown RBP31.47■■■□□ 2.63
ACSF3-212ENST00000541755 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
ACSF3-212ENST00000541755 ERCC6Q03468 1493 aa31.41■■■□□ 2.62
ACSF3-212ENST00000541755 CUX2O14529 1486 aa31.29■■■□□ 2.6
ACSF3-212ENST00000541755 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
ACSF3-212ENST00000541755 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
ACSF3-212ENST00000541755 PDS5BQ9NTI5 1447 aa31■■■□□ 2.55
ACSF3-212ENST00000541755 NESP48681 1621 aa30.98■■■□□ 2.55
ACSF3-212ENST00000541755 DNAJC5Q9H3Z4 198 aa30.88■■■□□ 2.53
ACSF3-212ENST00000541755 CADPSQ9ULU8 1353 aa30.86■■■□□ 2.53
ACSF3-212ENST00000541755 WIZO95785 1651 aa30.84■■■□□ 2.53
ACSF3-212ENST00000541755 THOC2Q8NI27 1593 aaKnown RBP30.74■■■□□ 2.51
ACSF3-212ENST00000541755 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
ACSF3-212ENST00000541755 KIF21AQ7Z4S6 1674 aa30.67■■■□□ 2.5
ACSF3-212ENST00000541755 TOP2AP11388 1531 aaKnown RBP30.65■■■□□ 2.5
ACSF3-212ENST00000541755 MRC2Q9UBG0 1479 aa30.61■■■□□ 2.49
ACSF3-212ENST00000541755 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
ACSF3-212ENST00000541755 CFTRP13569 1480 aa30.52■■■□□ 2.48
ACSF3-212ENST00000541755 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
ACSF3-212ENST00000541755 WDR62O43379 1518 aa30.47■■■□□ 2.47
ACSF3-212ENST00000541755 PRDM2Q13029 1718 aa30.24■■■□□ 2.43
ACSF3-212ENST00000541755 CCDC88BA6NC98 1476 aa30.19■■■□□ 2.42
ACSF3-212ENST00000541755 ABCC8Q09428 1581 aa30.11■■■□□ 2.41
ACSF3-212ENST00000541755 URB2Q14146 1524 aaKnown RBP30.07■■■□□ 2.4
ACSF3-212ENST00000541755 IFT140Q96RY7 1462 aa29.96■■■□□ 2.39
ACSF3-212ENST00000541755 OSCARQ8IYS5 282 aa29.89■■■□□ 2.38
ACSF3-212ENST00000541755 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
ACSF3-212ENST00000541755 DNMBPQ6XZF7 1577 aa29.86■■■□□ 2.37
ACSF3-212ENST00000541755 ZNF608Q9ULD9 1512 aaPredicted RBP29.62■■■□□ 2.33
ACSF3-212ENST00000541755 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
ACSF3-212ENST00000541755 TRIM41Q8WV44 630 aa29.59■■■□□ 2.33
ACSF3-212ENST00000541755 POLA1P09884 1462 aaPredicted RBP29.58■■■□□ 2.33
ACSF3-212ENST00000541755 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
ACSF3-212ENST00000541755 SUPT5HO00267 1087 aaKnown RBP29.54■■■□□ 2.32
ACSF3-212ENST00000541755 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
ACSF3-212ENST00000541755 SOGA1O94964 1423 aa29.52■■■□□ 2.32
ACSF3-212ENST00000541755 AQRO60306 1485 aaKnown RBP eCLIP29.44■■■□□ 2.36e-6■■■■□ 23.2
ACSF3-212ENST00000541755 FGD5Q6ZNL6 1462 aa29.42■■■□□ 2.3
ACSF3-212ENST00000541755 FBLN2P98095 1184 aa29.37■■■□□ 2.29
ACSF3-212ENST00000541755 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
ACSF3-212ENST00000541755 CUX1P39880 1505 aa29.35■■■□□ 2.29
ACSF3-212ENST00000541755 TDRD9Q8NDG6 1382 aaKnown RBP29.33■■■□□ 2.29
ACSF3-212ENST00000541755 MAGI1Q96QZ7 1491 aaPredicted RBP29.31■■■□□ 2.28
ACSF3-212ENST00000541755 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
ACSF3-212ENST00000541755 RIMBP3CA6NJZ7 1639 aa29.27■■■□□ 2.28
ACSF3-212ENST00000541755 RIMBP3BA6NNM3 1639 aa29.27■■■□□ 2.28
ACSF3-212ENST00000541755 RIMBP3Q9UFD9 1639 aa29.27■■■□□ 2.28
ACSF3-212ENST00000541755 ARHGEF11O15085 1522 aa29.27■■■□□ 2.28
ACSF3-212ENST00000541755 CHD1O14646 1710 aa29.27■■■□□ 2.28
ACSF3-212ENST00000541755 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
ACSF3-212ENST00000541755 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
ACSF3-212ENST00000541755 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.26
ACSF3-212ENST00000541755 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
ACSF3-212ENST00000541755 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
ACSF3-212ENST00000541755 ABCA10Q8WWZ4 1543 aa29.17■■■□□ 2.26
ACSF3-212ENST00000541755 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
ACSF3-212ENST00000541755 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
ACSF3-212ENST00000541755 TOP2BQ02880 1626 aa29.06■■■□□ 2.24
ACSF3-212ENST00000541755 CYB5RLQ6IPT4 315 aa29.05■■■□□ 2.24
ACSF3-212ENST00000541755 BIVM-ERCC5R4GMW8 1640 aa29.04■■■□□ 2.24
ACSF3-212ENST00000541755 ABCA5Q8WWZ7 1642 aa29.03■■■□□ 2.24
ACSF3-212ENST00000541755 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
ACSF3-212ENST00000541755 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
ACSF3-212ENST00000541755 ERICH3Q5RHP9 1530 aa28.88■■■□□ 2.21
ACSF3-212ENST00000541755 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
ACSF3-212ENST00000541755 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
ACSF3-212ENST00000541755 ADAMTS12P58397 1594 aa28.81■■■□□ 2.2
ACSF3-212ENST00000541755 TRHP20396 242 aaPredicted RBP28.78■■■□□ 2.2
ACSF3-212ENST00000541755 NUP160Q12769 1436 aa28.73■■■□□ 2.19
ACSF3-212ENST00000541755 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
ACSF3-212ENST00000541755 CEP170Q5SW79 1584 aa28.61■■■□□ 2.17
ACSF3-212ENST00000541755 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
ACSF3-212ENST00000541755 CUL7Q14999 1698 aa28.52■■■□□ 2.16
ACSF3-212ENST00000541755 JPH4Q96JJ6 628 aa28.47■■■□□ 2.15
ACSF3-212ENST00000541755 PRG4Q92954 1404 aaPredicted RBP28.45■■■□□ 2.15
ACSF3-212ENST00000541755 IGF1RP08069 1367 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms