RNA–Protein interactions for RNA: ENST00000541743.5

PGA4-204, Transcript of pepsinogen 4, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA4-204ENST00000541743 NISCHQ9Y2I1 1504 aa24.27■■□□□ 1.48
PGA4-204ENST00000541743 CCDC180Q9P1Z9 1646 aa21.65■■□□□ 1.06
PGA4-204ENST00000541743 ABCC9O60706 1549 aa21.5■■□□□ 1.03
PGA4-204ENST00000541743 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
PGA4-204ENST00000541743 NACADO15069 1562 aa20.47■□□□□ 0.87
PGA4-204ENST00000541743 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
PGA4-204ENST00000541743 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
PGA4-204ENST00000541743 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
PGA4-204ENST00000541743 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
PGA4-204ENST00000541743 DCAF1Q9Y4B6 1507 aa20.1■□□□□ 0.81
PGA4-204ENST00000541743 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
PGA4-204ENST00000541743 BICRAQ9NZM4 1560 aa19.98■□□□□ 0.79
PGA4-204ENST00000541743 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
PGA4-204ENST00000541743 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
PGA4-204ENST00000541743 SCRIBQ14160 1630 aa19.7■□□□□ 0.74
PGA4-204ENST00000541743 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
PGA4-204ENST00000541743 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
PGA4-204ENST00000541743 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
PGA4-204ENST00000541743 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
PGA4-204ENST00000541743 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
PGA4-204ENST00000541743 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
PGA4-204ENST00000541743 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
PGA4-204ENST00000541743 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
PGA4-204ENST00000541743 HMGXB3Q12766 1538 aa18.78■□□□□ 0.6
PGA4-204ENST00000541743 PEG3Q9GZU2 1588 aa18.73■□□□□ 0.59
PGA4-204ENST00000541743 MROH2BQ7Z745 1585 aa18.71■□□□□ 0.59
PGA4-204ENST00000541743 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
PGA4-204ENST00000541743 NESP48681 1621 aa18.52■□□□□ 0.56
PGA4-204ENST00000541743 ERCC6Q03468 1493 aa18.52■□□□□ 0.56
PGA4-204ENST00000541743 CUX2O14529 1486 aa18.52■□□□□ 0.55
PGA4-204ENST00000541743 WIZO95785 1651 aa18.49■□□□□ 0.55
PGA4-204ENST00000541743 RSF1Q96T23 1441 aaPredicted RBP18.45■□□□□ 0.54
PGA4-204ENST00000541743 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
PGA4-204ENST00000541743 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
PGA4-204ENST00000541743 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
PGA4-204ENST00000541743 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
PGA4-204ENST00000541743 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
PGA4-204ENST00000541743 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
PGA4-204ENST00000541743 KIF21AQ7Z4S6 1674 aa18.21■□□□□ 0.51
PGA4-204ENST00000541743 CFTRP13569 1480 aa18.19■□□□□ 0.5
PGA4-204ENST00000541743 MRC2Q9UBG0 1479 aa18.16■□□□□ 0.5
PGA4-204ENST00000541743 WDR62O43379 1518 aa18.13■□□□□ 0.49
PGA4-204ENST00000541743 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
PGA4-204ENST00000541743 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
PGA4-204ENST00000541743 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
PGA4-204ENST00000541743 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
PGA4-204ENST00000541743 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
PGA4-204ENST00000541743 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
PGA4-204ENST00000541743 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
PGA4-204ENST00000541743 ABCC8Q09428 1581 aa17.77■□□□□ 0.44
PGA4-204ENST00000541743 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
PGA4-204ENST00000541743 DNMBPQ6XZF7 1577 aa17.72■□□□□ 0.43
PGA4-204ENST00000541743 ZNF608Q9ULD9 1512 aaPredicted RBP17.71■□□□□ 0.43
PGA4-204ENST00000541743 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
PGA4-204ENST00000541743 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
PGA4-204ENST00000541743 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
PGA4-204ENST00000541743 EIF4G3O43432 1585 aaKnown RBP17.58■□□□□ 0.41
PGA4-204ENST00000541743 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
PGA4-204ENST00000541743 CUX1P39880 1505 aa17.56■□□□□ 0.4
PGA4-204ENST00000541743 SOGA1O94964 1423 aa17.55■□□□□ 0.4
PGA4-204ENST00000541743 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
PGA4-204ENST00000541743 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
PGA4-204ENST00000541743 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
PGA4-204ENST00000541743 TDRD9Q8NDG6 1382 aaKnown RBP17.48■□□□□ 0.39
PGA4-204ENST00000541743 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
PGA4-204ENST00000541743 ARHGEF11O15085 1522 aa17.38■□□□□ 0.37
PGA4-204ENST00000541743 RIMBP3CA6NJZ7 1639 aa17.38■□□□□ 0.37
PGA4-204ENST00000541743 RIMBP3BA6NNM3 1639 aa17.38■□□□□ 0.37
PGA4-204ENST00000541743 RIMBP3Q9UFD9 1639 aa17.38■□□□□ 0.37
PGA4-204ENST00000541743 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
PGA4-204ENST00000541743 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
PGA4-204ENST00000541743 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
PGA4-204ENST00000541743 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
PGA4-204ENST00000541743 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
PGA4-204ENST00000541743 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
PGA4-204ENST00000541743 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
PGA4-204ENST00000541743 ABCA10Q8WWZ4 1543 aa17.36■□□□□ 0.37
PGA4-204ENST00000541743 FBLN2P98095 1184 aa17.35■□□□□ 0.37
PGA4-204ENST00000541743 CHD1O14646 1710 aa17.34■□□□□ 0.37
PGA4-204ENST00000541743 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
PGA4-204ENST00000541743 SYNJ2O15056 1496 aa17.31■□□□□ 0.36
PGA4-204ENST00000541743 ABCA5Q8WWZ7 1642 aa17.29■□□□□ 0.36
PGA4-204ENST00000541743 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
PGA4-204ENST00000541743 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
PGA4-204ENST00000541743 PBRM1Q86U86 1689 aa17.25■□□□□ 0.35
PGA4-204ENST00000541743 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
PGA4-204ENST00000541743 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
PGA4-204ENST00000541743 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
PGA4-204ENST00000541743 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
PGA4-204ENST00000541743 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
PGA4-204ENST00000541743 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
PGA4-204ENST00000541743 NUP160Q12769 1436 aa17.12■□□□□ 0.33
PGA4-204ENST00000541743 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
PGA4-204ENST00000541743 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
PGA4-204ENST00000541743 IGF1RP08069 1367 aa16.99■□□□□ 0.31
PGA4-204ENST00000541743 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
PGA4-204ENST00000541743 ERCC6L2Q5T890 1561 aa16.98■□□□□ 0.31
PGA4-204ENST00000541743 CUL7Q14999 1698 aa16.94■□□□□ 0.3
PGA4-204ENST00000541743 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
PGA4-204ENST00000541743 JPH4Q96JJ6 628 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms