RNA–Protein interactions for RNA: ENST00000541698.5

PTPN6-215, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-215ENST00000541698 NISCHQ9Y2I1 1504 aa36.94■■■■□ 3.5
PTPN6-215ENST00000541698 ABCC9O60706 1549 aa34.5■■■■□ 3.11
PTPN6-215ENST00000541698 CCDC180Q9P1Z9 1646 aa33.56■■■□□ 2.96
PTPN6-215ENST00000541698 DNAJC5BQ9UF47 199 aa33.31■■■□□ 2.92
PTPN6-215ENST00000541698 RB1CC1Q8TDY2 1594 aa32.44■■■□□ 2.78
PTPN6-215ENST00000541698 NACADO15069 1562 aa32■■■□□ 2.71
PTPN6-215ENST00000541698 PABPN1Q86U42 306 aaKnown RBP eCLIP31.94■■■□□ 2.7
PTPN6-215ENST00000541698 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
PTPN6-215ENST00000541698 BICRAQ9NZM4 1560 aa31.55■■■□□ 2.64
PTPN6-215ENST00000541698 DCAF8L2P0C7V8 631 aa31.47■■■□□ 2.63
PTPN6-215ENST00000541698 DNAJC5Q9H3Z4 198 aa31.37■■■□□ 2.61
PTPN6-215ENST00000541698 MYO15BQ96JP2 1530 aa31.31■■■□□ 2.6
PTPN6-215ENST00000541698 CECR2Q9BXF3 1484 aa31.22■■■□□ 2.59
PTPN6-215ENST00000541698 CC2D2AQ9P2K1 1620 aa31.12■■■□□ 2.57
PTPN6-215ENST00000541698 SHROOM4Q9ULL8 1493 aa31.11■■■□□ 2.57
PTPN6-215ENST00000541698 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
PTPN6-215ENST00000541698 DCAF1Q9Y4B6 1507 aa30.52■■■□□ 2.48
PTPN6-215ENST00000541698 SCRIBQ14160 1630 aa30.43■■■□□ 2.46
PTPN6-215ENST00000541698 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
PTPN6-215ENST00000541698 CUX2O14529 1486 aa30.23■■■□□ 2.43
PTPN6-215ENST00000541698 ERCC6Q03468 1493 aa29.85■■■□□ 2.37
PTPN6-215ENST00000541698 NCAPD3P42695 1498 aa29.6■■■□□ 2.33
PTPN6-215ENST00000541698 TRIM41Q8WV44 630 aa29.44■■■□□ 2.3
PTPN6-215ENST00000541698 NESP48681 1621 aa29.35■■■□□ 2.29
PTPN6-215ENST00000541698 ATAD2BQ9ULI0 1458 aa29.32■■■□□ 2.28
PTPN6-215ENST00000541698 THOC2Q8NI27 1593 aaKnown RBP29.27■■■□□ 2.28
PTPN6-215ENST00000541698 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
PTPN6-215ENST00000541698 SMARCA2P51531 1590 aa29.17■■■□□ 2.26
PTPN6-215ENST00000541698 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
PTPN6-215ENST00000541698 SMARCA4P51532 1647 aa28.98■■■□□ 2.23
PTPN6-215ENST00000541698 BAZ1BQ9UIG0 1483 aaKnown RBP28.94■■■□□ 2.22
PTPN6-215ENST00000541698 PDS5BQ9NTI5 1447 aa28.92■■■□□ 2.22
PTPN6-215ENST00000541698 KIF21AQ7Z4S6 1674 aa28.89■■■□□ 2.21
PTPN6-215ENST00000541698 PEG3Q9GZU2 1588 aa28.79■■■□□ 2.2
PTPN6-215ENST00000541698 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
PTPN6-215ENST00000541698 MRC2Q9UBG0 1479 aa28.71■■■□□ 2.19
PTPN6-215ENST00000541698 WDR62O43379 1518 aa28.68■■■□□ 2.18
PTPN6-215ENST00000541698 OSCARQ8IYS5 282 aa28.65■■■□□ 2.18
PTPN6-215ENST00000541698 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
PTPN6-215ENST00000541698 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
PTPN6-215ENST00000541698 CEP164Q9UPV0 1460 aa28.37■■■□□ 2.13
PTPN6-215ENST00000541698 RIMBP3CA6NJZ7 1639 aa28.33■■■□□ 2.13
PTPN6-215ENST00000541698 RIMBP3BA6NNM3 1639 aa28.33■■■□□ 2.13
PTPN6-215ENST00000541698 RIMBP3Q9UFD9 1639 aa28.33■■■□□ 2.13
PTPN6-215ENST00000541698 FANCD2Q9BXW9 1451 aa28.26■■■□□ 2.11
PTPN6-215ENST00000541698 ARHGEF11O15085 1522 aa28.19■■■□□ 2.1
PTPN6-215ENST00000541698 CFTRP13569 1480 aa28.09■■■□□ 2.09
PTPN6-215ENST00000541698 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
PTPN6-215ENST00000541698 CYB5RLQ6IPT4 315 aa28.01■■■□□ 2.07
PTPN6-215ENST00000541698 TRHP20396 242 aaPredicted RBP27.98■■■□□ 2.07
PTPN6-215ENST00000541698 WIZO95785 1651 aa27.97■■■□□ 2.07
PTPN6-215ENST00000541698 AEBP2Q6ZN18 517 aaPredicted RBP27.91■■■□□ 2.06
PTPN6-215ENST00000541698 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
PTPN6-215ENST00000541698 IFT140Q96RY7 1462 aa27.87■■■□□ 2.05
PTPN6-215ENST00000541698 ARAP1Q96P48 1450 aa27.84■■■□□ 2.05
PTPN6-215ENST00000541698 RSF1Q96T23 1441 aaPredicted RBP27.73■■■□□ 2.03
PTPN6-215ENST00000541698 EIF4G3O43432 1585 aaKnown RBP27.66■■■□□ 2.02
PTPN6-215ENST00000541698 TOPBP1Q92547 1522 aa27.62■■■□□ 2.01
PTPN6-215ENST00000541698 TOP2AP11388 1531 aaKnown RBP27.61■■■□□ 2.01
PTPN6-215ENST00000541698 CHD1O14646 1710 aa27.6■■■□□ 2.01
PTPN6-215ENST00000541698 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
PTPN6-215ENST00000541698 ABCC8Q09428 1581 aa27.52■■■□□ 2
PTPN6-215ENST00000541698 AQRO60306 1485 aaKnown RBP eCLIP27.51■■■□□ 2
PTPN6-215ENST00000541698 FBLN2P98095 1184 aa27.48■■□□□ 1.99
PTPN6-215ENST00000541698 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.98
PTPN6-215ENST00000541698 DNMBPQ6XZF7 1577 aa27.41■■□□□ 1.98
PTPN6-215ENST00000541698 CLASP1Q7Z460 1538 aa27.36■■□□□ 1.97
PTPN6-215ENST00000541698 CCDC88BA6NC98 1476 aa27.31■■□□□ 1.96
PTPN6-215ENST00000541698 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
PTPN6-215ENST00000541698 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
PTPN6-215ENST00000541698 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.94
PTPN6-215ENST00000541698 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
PTPN6-215ENST00000541698 CHMP7Q8WUX9 453 aaPredicted RBP27.16■■□□□ 1.94
PTPN6-215ENST00000541698 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
PTPN6-215ENST00000541698 GAPVD1Q14C86 1478 aa27.14■■□□□ 1.94
PTPN6-215ENST00000541698 WDR97A6NE52 1622 aa27.13■■□□□ 1.93
PTPN6-215ENST00000541698 MAGI1Q96QZ7 1491 aaPredicted RBP27.13■■□□□ 1.93
PTPN6-215ENST00000541698 SOGA1O94964 1423 aa27.12■■□□□ 1.93
PTPN6-215ENST00000541698 SYNJ2O15056 1496 aa27.05■■□□□ 1.92
PTPN6-215ENST00000541698 GRIN2BQ13224 1484 aa27.01■■□□□ 1.91
PTPN6-215ENST00000541698 FGD5Q6ZNL6 1462 aa26.93■■□□□ 1.9
PTPN6-215ENST00000541698 ILDR1Q86SU0 546 aaPredicted RBP26.89■■□□□ 1.9
PTPN6-215ENST00000541698 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
PTPN6-215ENST00000541698 CUX1P39880 1505 aa26.75■■□□□ 1.87
PTPN6-215ENST00000541698 KIF13AQ9H1H9 1805 aa26.75■■□□□ 1.87
PTPN6-215ENST00000541698 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
PTPN6-215ENST00000541698 CEP170Q5SW79 1584 aa26.7■■□□□ 1.86
PTPN6-215ENST00000541698 KDM4FA0A1W2PPD8 638 aa26.68■■□□□ 1.86
PTPN6-215ENST00000541698 GRIN2AQ12879 1464 aa26.66■■□□□ 1.86
PTPN6-215ENST00000541698 NUP160Q12769 1436 aa26.65■■□□□ 1.86
PTPN6-215ENST00000541698 ABCA5Q8WWZ7 1642 aa26.63■■□□□ 1.85
PTPN6-215ENST00000541698 ABCA10Q8WWZ4 1543 aa26.62■■□□□ 1.85
PTPN6-215ENST00000541698 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
PTPN6-215ENST00000541698 ABCC10Q5T3U5 1492 aa26.57■■□□□ 1.84
PTPN6-215ENST00000541698 FAM69CQ0P6D2 419 aa26.54■■□□□ 1.84
PTPN6-215ENST00000541698 ADAMTS12P58397 1594 aa26.5■■□□□ 1.83
PTPN6-215ENST00000541698 MAPKBP1O60336 1514 aa26.46■■□□□ 1.83
PTPN6-215ENST00000541698 KDM6BO15054 1643 aa26.43■■□□□ 1.82
PTPN6-215ENST00000541698 DIP2BQ9P265 1576 aa26.43■■□□□ 1.82
PTPN6-215ENST00000541698 PRG4Q92954 1404 aaPredicted RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms