RNA–Protein interactions for RNA: ENST00000541616.1

CACNA2D4-214, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 4

Gene CACNA2D4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-214ENST00000541616 NISCHQ9Y2I1 1504 aa42.01■■■■■ 4.32
CACNA2D4-214ENST00000541616 CCDC180Q9P1Z9 1646 aa37.5■■■■□ 3.59
CACNA2D4-214ENST00000541616 ABCC9O60706 1549 aa37.02■■■■□ 3.52
CACNA2D4-214ENST00000541616 RB1CC1Q8TDY2 1594 aa35.49■■■■□ 3.27
CACNA2D4-214ENST00000541616 NACADO15069 1562 aa35.36■■■■□ 3.25
CACNA2D4-214ENST00000541616 DCAF8L2P0C7V8 631 aa35.36■■■■□ 3.25
CACNA2D4-214ENST00000541616 MYO15BQ96JP2 1530 aa35.02■■■■□ 3.2
CACNA2D4-214ENST00000541616 ZCCHC6Q5VYS8 1495 aaKnown RBP34.91■■■■□ 3.18
CACNA2D4-214ENST00000541616 DCAF1Q9Y4B6 1507 aa34.75■■■■□ 3.15
CACNA2D4-214ENST00000541616 UNC13AQ9UPW8 1703 aa34.61■■■■□ 3.13
CACNA2D4-214ENST00000541616 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
CACNA2D4-214ENST00000541616 BICRAQ9NZM4 1560 aa34.35■■■■□ 3.09
CACNA2D4-214ENST00000541616 DNAJC5BQ9UF47 199 aa34.24■■■■□ 3.07
CACNA2D4-214ENST00000541616 SCRIBQ14160 1630 aa34.19■■■■□ 3.06
CACNA2D4-214ENST00000541616 SHROOM4Q9ULL8 1493 aa34.02■■■■□ 3.04
CACNA2D4-214ENST00000541616 EIF4G1Q04637 1599 aaKnown RBP33.51■■■□□ 2.95
CACNA2D4-214ENST00000541616 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
CACNA2D4-214ENST00000541616 CECR2Q9BXF3 1484 aa33.31■■■□□ 2.92
CACNA2D4-214ENST00000541616 SMARCA4P51532 1647 aa32.67■■■□□ 2.82
CACNA2D4-214ENST00000541616 NCAPD3P42695 1498 aa32.62■■■□□ 2.81
CACNA2D4-214ENST00000541616 BAZ1AQ9NRL2 1556 aaPredicted RBP32.61■■■□□ 2.81
CACNA2D4-214ENST00000541616 ATAD2BQ9ULI0 1458 aa32.58■■■□□ 2.81
CACNA2D4-214ENST00000541616 SMARCA2P51531 1590 aa32.56■■■□□ 2.8
CACNA2D4-214ENST00000541616 HMGXB3Q12766 1538 aa32.42■■■□□ 2.78
CACNA2D4-214ENST00000541616 MROH2BQ7Z745 1585 aa32.36■■■□□ 2.77
CACNA2D4-214ENST00000541616 PEG3Q9GZU2 1588 aa32.34■■■□□ 2.77
CACNA2D4-214ENST00000541616 BAZ1BQ9UIG0 1483 aaKnown RBP32.33■■■□□ 2.77
CACNA2D4-214ENST00000541616 WIZO95785 1651 aa32■■■□□ 2.71
CACNA2D4-214ENST00000541616 ERCC6Q03468 1493 aa31.98■■■□□ 2.71
CACNA2D4-214ENST00000541616 NESP48681 1621 aa31.91■■■□□ 2.7
CACNA2D4-214ENST00000541616 RSF1Q96T23 1441 aaPredicted RBP31.88■■■□□ 2.69
CACNA2D4-214ENST00000541616 LAMC3Q9Y6N6 1575 aa31.82■■■□□ 2.68
CACNA2D4-214ENST00000541616 CUX2O14529 1486 aa31.73■■■□□ 2.67
CACNA2D4-214ENST00000541616 CADPSQ9ULU8 1353 aa31.68■■■□□ 2.66
CACNA2D4-214ENST00000541616 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
CACNA2D4-214ENST00000541616 TOP2AP11388 1531 aaKnown RBP31.65■■■□□ 2.66
CACNA2D4-214ENST00000541616 KIF21AQ7Z4S6 1674 aa31.53■■■□□ 2.64
CACNA2D4-214ENST00000541616 THOC2Q8NI27 1593 aaKnown RBP31.48■■■□□ 2.63
CACNA2D4-214ENST00000541616 CFTRP13569 1480 aa31.39■■■□□ 2.62
CACNA2D4-214ENST00000541616 MRC2Q9UBG0 1479 aa31.32■■■□□ 2.6
CACNA2D4-214ENST00000541616 FANCD2Q9BXW9 1451 aa31.3■■■□□ 2.6
CACNA2D4-214ENST00000541616 CEP164Q9UPV0 1460 aa31.3■■■□□ 2.6
CACNA2D4-214ENST00000541616 CCDC88BA6NC98 1476 aa31.29■■■□□ 2.6
CACNA2D4-214ENST00000541616 WDR62O43379 1518 aa31.19■■■□□ 2.58
CACNA2D4-214ENST00000541616 DNAJC5Q9H3Z4 198 aa31.16■■■□□ 2.58
CACNA2D4-214ENST00000541616 PRDM2Q13029 1718 aa31.12■■■□□ 2.57
CACNA2D4-214ENST00000541616 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
CACNA2D4-214ENST00000541616 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
CACNA2D4-214ENST00000541616 ABCC8Q09428 1581 aa30.79■■■□□ 2.52
CACNA2D4-214ENST00000541616 TOPBP1Q92547 1522 aa30.75■■■□□ 2.51
CACNA2D4-214ENST00000541616 DNMBPQ6XZF7 1577 aa30.7■■■□□ 2.5
CACNA2D4-214ENST00000541616 IFT140Q96RY7 1462 aa30.66■■■□□ 2.5
CACNA2D4-214ENST00000541616 ZNF608Q9ULD9 1512 aaPredicted RBP30.51■■■□□ 2.47
CACNA2D4-214ENST00000541616 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
CACNA2D4-214ENST00000541616 OSCARQ8IYS5 282 aa30.42■■■□□ 2.46
CACNA2D4-214ENST00000541616 TARBP1Q13395 1621 aaKnown RBP30.41■■■□□ 2.46
CACNA2D4-214ENST00000541616 EIF4G3O43432 1585 aaKnown RBP30.38■■■□□ 2.45
CACNA2D4-214ENST00000541616 SOGA1O94964 1423 aa30.38■■■□□ 2.45
CACNA2D4-214ENST00000541616 CUX1P39880 1505 aa30.37■■■□□ 2.45
CACNA2D4-214ENST00000541616 FGD5Q6ZNL6 1462 aa30.35■■■□□ 2.45
CACNA2D4-214ENST00000541616 RAD54L2Q9Y4B4 1467 aa30.34■■■□□ 2.45
CACNA2D4-214ENST00000541616 AQRO60306 1485 aaKnown RBP eCLIP30.32■■■□□ 2.44
CACNA2D4-214ENST00000541616 TDRD9Q8NDG6 1382 aaKnown RBP30.23■■■□□ 2.43
CACNA2D4-214ENST00000541616 WDR97A6NE52 1622 aa30.2■■■□□ 2.43
CACNA2D4-214ENST00000541616 WRNQ14191 1432 aaPredicted RBP eCLIP30.11■■■□□ 2.41
CACNA2D4-214ENST00000541616 FBLN2P98095 1184 aa30.1■■■□□ 2.41
CACNA2D4-214ENST00000541616 CHD1O14646 1710 aa30.07■■■□□ 2.4
CACNA2D4-214ENST00000541616 TOP2BQ02880 1626 aa30.05■■■□□ 2.4
CACNA2D4-214ENST00000541616 GRIN2BQ13224 1484 aa30.05■■■□□ 2.4
CACNA2D4-214ENST00000541616 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
CACNA2D4-214ENST00000541616 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
CACNA2D4-214ENST00000541616 TRIM41Q8WV44 630 aa30.03■■■□□ 2.4
CACNA2D4-214ENST00000541616 SNAPC4Q5SXM2 1469 aa30.03■■■□□ 2.4
CACNA2D4-214ENST00000541616 GAPVD1Q14C86 1478 aa30.01■■■□□ 2.4
CACNA2D4-214ENST00000541616 MAGI1Q96QZ7 1491 aaPredicted RBP30■■■□□ 2.39
CACNA2D4-214ENST00000541616 SYNJ1O43426 1573 aa30■■■□□ 2.39
CACNA2D4-214ENST00000541616 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
CACNA2D4-214ENST00000541616 PBRM1Q86U86 1689 aa29.94■■■□□ 2.38
CACNA2D4-214ENST00000541616 ABCA5Q8WWZ7 1642 aa29.92■■■□□ 2.38
CACNA2D4-214ENST00000541616 RIMBP3CA6NJZ7 1639 aa29.89■■■□□ 2.37
CACNA2D4-214ENST00000541616 RIMBP3BA6NNM3 1639 aa29.89■■■□□ 2.37
CACNA2D4-214ENST00000541616 RIMBP3Q9UFD9 1639 aa29.89■■■□□ 2.37
CACNA2D4-214ENST00000541616 SYNJ2O15056 1496 aa29.88■■■□□ 2.37
CACNA2D4-214ENST00000541616 ARHGEF11O15085 1522 aa29.85■■■□□ 2.37
CACNA2D4-214ENST00000541616 CLASP1Q7Z460 1538 aa29.71■■■□□ 2.35
CACNA2D4-214ENST00000541616 ERICH3Q5RHP9 1530 aa29.69■■■□□ 2.34
CACNA2D4-214ENST00000541616 ADAMTS12P58397 1594 aa29.67■■■□□ 2.34
CACNA2D4-214ENST00000541616 FHAD1B1AJZ9 1412 aa29.65■■■□□ 2.34
CACNA2D4-214ENST00000541616 CYB5RLQ6IPT4 315 aa29.65■■■□□ 2.34
CACNA2D4-214ENST00000541616 GRIN2AQ12879 1464 aa29.65■■■□□ 2.34
CACNA2D4-214ENST00000541616 ARAP1Q96P48 1450 aa29.57■■■□□ 2.32
CACNA2D4-214ENST00000541616 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
CACNA2D4-214ENST00000541616 NUP160Q12769 1436 aa29.51■■■□□ 2.31
CACNA2D4-214ENST00000541616 CEP170Q5SW79 1584 aa29.48■■■□□ 2.31
CACNA2D4-214ENST00000541616 IGF1RP08069 1367 aa29.41■■■□□ 2.3
CACNA2D4-214ENST00000541616 CUL7Q14999 1698 aa29.36■■■□□ 2.29
CACNA2D4-214ENST00000541616 SHROOM2Q13796 1616 aa29.31■■■□□ 2.28
CACNA2D4-214ENST00000541616 JPH4Q96JJ6 628 aa29.27■■■□□ 2.28
CACNA2D4-214ENST00000541616 CARMIL1Q5VZK9 1371 aa29.26■■■□□ 2.28
CACNA2D4-214ENST00000541616 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms