RNA–Protein interactions for RNA: ENST00000541592.1

HIST4H4-206, Transcript of histone cluster 4 H4, humanhuman

TSL 3

Gene HIST4H4, Length 810 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-206ENST00000541592 NISCHQ9Y2I1 1504 aa49.75■■■■■ 5.55
HIST4H4-206ENST00000541592 ABCC9O60706 1549 aa45.01■■■■■ 4.8
HIST4H4-206ENST00000541592 CCDC180Q9P1Z9 1646 aa44.58■■■■■ 4.73
HIST4H4-206ENST00000541592 RB1CC1Q8TDY2 1594 aa42.58■■■■■ 4.41
HIST4H4-206ENST00000541592 DNAJC5BQ9UF47 199 aa42.52■■■■■ 4.4
HIST4H4-206ENST00000541592 DCAF8L2P0C7V8 631 aa42.29■■■■■ 4.36
HIST4H4-206ENST00000541592 NACADO15069 1562 aa42.23■■■■■ 4.35
HIST4H4-206ENST00000541592 PABPN1Q86U42 306 aaKnown RBP eCLIP41.98■■■■■ 4.31
HIST4H4-206ENST00000541592 UNC13AQ9UPW8 1703 aa41.73■■■■■ 4.27
HIST4H4-206ENST00000541592 MYO15BQ96JP2 1530 aa41.51■■■■■ 4.24
HIST4H4-206ENST00000541592 BICRAQ9NZM4 1560 aa41.46■■■■■ 4.23
HIST4H4-206ENST00000541592 ZCCHC6Q5VYS8 1495 aaKnown RBP41.16■■■■■ 4.18
HIST4H4-206ENST00000541592 DCAF1Q9Y4B6 1507 aa40.95■■■■■ 4.15
HIST4H4-206ENST00000541592 SCRIBQ14160 1630 aa40.81■■■■■ 4.12
HIST4H4-206ENST00000541592 SHROOM4Q9ULL8 1493 aa40.61■■■■■ 4.09
HIST4H4-206ENST00000541592 CC2D2AQ9P2K1 1620 aa40.58■■■■■ 4.09
HIST4H4-206ENST00000541592 CECR2Q9BXF3 1484 aa40.49■■■■■ 4.07
HIST4H4-206ENST00000541592 EIF4G1Q04637 1599 aaKnown RBP40.41■■■■■ 4.06
HIST4H4-206ENST00000541592 NCAPD3P42695 1498 aa39.05■■■■□ 3.84
HIST4H4-206ENST00000541592 DNAJC5Q9H3Z4 198 aa39.02■■■■□ 3.84
HIST4H4-206ENST00000541592 ATAD2BQ9ULI0 1458 aa38.95■■■■□ 3.83
HIST4H4-206ENST00000541592 SMARCA4P51532 1647 aa38.83■■■■□ 3.81
HIST4H4-206ENST00000541592 ERCC6Q03468 1493 aa38.78■■■■□ 3.8
HIST4H4-206ENST00000541592 SMARCA2P51531 1590 aa38.73■■■■□ 3.79
HIST4H4-206ENST00000541592 CUX2O14529 1486 aa38.68■■■■□ 3.78
HIST4H4-206ENST00000541592 HMGXB3Q12766 1538 aa38.67■■■■□ 3.78
HIST4H4-206ENST00000541592 NESP48681 1621 aa38.65■■■■□ 3.78
HIST4H4-206ENST00000541592 BAZ1AQ9NRL2 1556 aaPredicted RBP38.56■■■■□ 3.76
HIST4H4-206ENST00000541592 BAZ1BQ9UIG0 1483 aaKnown RBP38.53■■■■□ 3.76
HIST4H4-206ENST00000541592 MROH2BQ7Z745 1585 aa38.41■■■■□ 3.74
HIST4H4-206ENST00000541592 PEG3Q9GZU2 1588 aa38.38■■■■□ 3.73
HIST4H4-206ENST00000541592 THOC2Q8NI27 1593 aaKnown RBP38.15■■■■□ 3.7
HIST4H4-206ENST00000541592 LAMC3Q9Y6N6 1575 aa38.14■■■■□ 3.7
HIST4H4-206ENST00000541592 KIF21AQ7Z4S6 1674 aa38.05■■■■□ 3.68
HIST4H4-206ENST00000541592 PDS5BQ9NTI5 1447 aa37.96■■■■□ 3.67
HIST4H4-206ENST00000541592 WIZO95785 1651 aa37.95■■■■□ 3.67
HIST4H4-206ENST00000541592 CADPSQ9ULU8 1353 aa37.89■■■■□ 3.66
HIST4H4-206ENST00000541592 MRC2Q9UBG0 1479 aa37.67■■■■□ 3.62
HIST4H4-206ENST00000541592 WDR62O43379 1518 aa37.56■■■■□ 3.6
HIST4H4-206ENST00000541592 RSF1Q96T23 1441 aaPredicted RBP37.53■■■■□ 3.6
HIST4H4-206ENST00000541592 CEP164Q9UPV0 1460 aa37.48■■■■□ 3.59
HIST4H4-206ENST00000541592 FANCD2Q9BXW9 1451 aa37.46■■■■□ 3.59
HIST4H4-206ENST00000541592 CFTRP13569 1480 aa37.39■■■■□ 3.58
HIST4H4-206ENST00000541592 TOP2AP11388 1531 aaKnown RBP37.35■■■■□ 3.57
HIST4H4-206ENST00000541592 TRIM41Q8WV44 630 aa37.34■■■■□ 3.57
HIST4H4-206ENST00000541592 URB2Q14146 1524 aaKnown RBP37.2■■■■□ 3.55
HIST4H4-206ENST00000541592 CCDC88BA6NC98 1476 aa37.02■■■■□ 3.52
HIST4H4-206ENST00000541592 OSCARQ8IYS5 282 aa37.01■■■■□ 3.52
HIST4H4-206ENST00000541592 PRDM2Q13029 1718 aa36.93■■■■□ 3.5
HIST4H4-206ENST00000541592 ZNF608Q9ULD9 1512 aaPredicted RBP36.82■■■■□ 3.48
HIST4H4-206ENST00000541592 TOPBP1Q92547 1522 aa36.74■■■■□ 3.47
HIST4H4-206ENST00000541592 IFT140Q96RY7 1462 aa36.72■■■■□ 3.47
HIST4H4-206ENST00000541592 RIMBP3CA6NJZ7 1639 aa36.54■■■■□ 3.44
HIST4H4-206ENST00000541592 RIMBP3BA6NNM3 1639 aa36.54■■■■□ 3.44
HIST4H4-206ENST00000541592 RIMBP3Q9UFD9 1639 aa36.54■■■■□ 3.44
HIST4H4-206ENST00000541592 DNMBPQ6XZF7 1577 aa36.53■■■■□ 3.44
HIST4H4-206ENST00000541592 ABCC8Q09428 1581 aa36.51■■■■□ 3.44
HIST4H4-206ENST00000541592 EIF4G3O43432 1585 aaKnown RBP36.5■■■■□ 3.43
HIST4H4-206ENST00000541592 AQRO60306 1485 aaKnown RBP eCLIP36.48■■■■□ 3.43
HIST4H4-206ENST00000541592 TARBP1Q13395 1621 aaKnown RBP36.41■■■■□ 3.42
HIST4H4-206ENST00000541592 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
HIST4H4-206ENST00000541592 POLA1P09884 1462 aaPredicted RBP36.36■■■■□ 3.41
HIST4H4-206ENST00000541592 RAD54L2Q9Y4B4 1467 aa36.32■■■■□ 3.41
HIST4H4-206ENST00000541592 CHD1O14646 1710 aa36.31■■■■□ 3.4
HIST4H4-206ENST00000541592 FBLN2P98095 1184 aa36.3■■■■□ 3.4
HIST4H4-206ENST00000541592 CYB5RLQ6IPT4 315 aa36.25■■■■□ 3.39
HIST4H4-206ENST00000541592 TDRD9Q8NDG6 1382 aaKnown RBP36.23■■■■□ 3.39
HIST4H4-206ENST00000541592 SOGA1O94964 1423 aa36.21■■■■□ 3.39
HIST4H4-206ENST00000541592 FGD5Q6ZNL6 1462 aa36.11■■■■□ 3.37
HIST4H4-206ENST00000541592 CUX1P39880 1505 aa36.08■■■■□ 3.37
HIST4H4-206ENST00000541592 ARAP1Q96P48 1450 aa36.05■■■■□ 3.36
HIST4H4-206ENST00000541592 SNAPC4Q5SXM2 1469 aa36.03■■■■□ 3.36
HIST4H4-206ENST00000541592 CHMP7Q8WUX9 453 aaPredicted RBP35.93■■■■□ 3.34
HIST4H4-206ENST00000541592 SUPT5HO00267 1087 aaKnown RBP35.89■■■■□ 3.34
HIST4H4-206ENST00000541592 TRHP20396 242 aaPredicted RBP35.89■■■■□ 3.34
HIST4H4-206ENST00000541592 GRIN2BQ13224 1484 aa35.85■■■■□ 3.33
HIST4H4-206ENST00000541592 CLASP1Q7Z460 1538 aa35.84■■■■□ 3.33
HIST4H4-206ENST00000541592 WDR97A6NE52 1622 aa35.84■■■■□ 3.33
HIST4H4-206ENST00000541592 MAGI1Q96QZ7 1491 aaPredicted RBP35.82■■■■□ 3.32
HIST4H4-206ENST00000541592 SYNJ1O43426 1573 aa35.76■■■■□ 3.31
HIST4H4-206ENST00000541592 SYNJ2O15056 1496 aa35.74■■■■□ 3.31
HIST4H4-206ENST00000541592 GAPVD1Q14C86 1478 aa35.73■■■■□ 3.31
HIST4H4-206ENST00000541592 PBRM1Q86U86 1689 aa35.71■■■■□ 3.31
HIST4H4-206ENST00000541592 ABCA10Q8WWZ4 1543 aa35.64■■■■□ 3.3
HIST4H4-206ENST00000541592 ABCA5Q8WWZ7 1642 aa35.6■■■■□ 3.29
HIST4H4-206ENST00000541592 WRNQ14191 1432 aaPredicted RBP eCLIP35.47■■■■□ 3.27
HIST4H4-206ENST00000541592 ERCC6L2Q5T890 1561 aa35.42■■■■□ 3.26
HIST4H4-206ENST00000541592 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
HIST4H4-206ENST00000541592 TOP2BQ02880 1626 aa35.37■■■■□ 3.25
HIST4H4-206ENST00000541592 BIVM-ERCC5R4GMW8 1640 aa35.36■■■■□ 3.25
HIST4H4-206ENST00000541592 ADAMTS12P58397 1594 aa35.35■■■■□ 3.25
HIST4H4-206ENST00000541592 CEP170Q5SW79 1584 aa35.34■■■■□ 3.25
HIST4H4-206ENST00000541592 NUP160Q12769 1436 aa35.29■■■■□ 3.24
HIST4H4-206ENST00000541592 FHAD1B1AJZ9 1412 aa35.24■■■■□ 3.23
HIST4H4-206ENST00000541592 ERICH3Q5RHP9 1530 aa35.15■■■■□ 3.22
HIST4H4-206ENST00000541592 SHROOM2Q13796 1616 aa35.13■■■■□ 3.21
HIST4H4-206ENST00000541592 PRG4Q92954 1404 aaPredicted RBP35.02■■■■□ 3.2
HIST4H4-206ENST00000541592 JPH4Q96JJ6 628 aa35.02■■■■□ 3.2
HIST4H4-206ENST00000541592 AEBP2Q6ZN18 517 aaPredicted RBP34.92■■■■□ 3.18
HIST4H4-206ENST00000541592 RUSC2Q8N2Y8 1516 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms